Naga_100028g46, gene1279 (gene) Nannochloropsis gaditana

Overview
NameNaga_100028g46
Unique Namegene1279
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:338596..343048 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100028g46
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:338596..343048 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL087ngnoL087Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04250NO01G04250Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1325rna1325-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1325rna1325Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1325

>rna1325-protein ID=rna1325-protein|Name=rna1325|organism=Nannochloropsis gaditana|type=polypeptide|length=1449bp
MAESLLSLIYPLQWQHPYLVPLPRELLVVVETPTNYILGVHTEWLADVPR
DSLKDVVCVDCDSGAVRLPPRPFNPPSFPPSVLYPLLRRLRGTVYPMLTR
LDSASSRVSLDDLPIISTSAPSEISPASEEELRRLFLRCLAYLLSGYHDC
VFYIDPNSPIFNRARFLAEYAPAEDHAFLSRLLDTQSFQAFLENQDGPSI
NLFRRTLFQAFSRATSRPPSPLPGETTSSPAASTSFPSLKKCPADFRILM
EEEESGNEWLETPGAGHRETHGEAWEQRPSAGRGGEECEVKLMLKIPPPP
LYGETEEDESESDGSVDEDCDPATTRGEEAVPGGRREFRFDGDQDQKAEG
WEGVSEERDVSGRQRTSVRFNLGELENPGESKGDRGDSEVMSSDRMANTI
TASEGLSTVVSAESHRHKEKRAKAKKARRPLNLPGLTVGSPPTRSSLEGT
FGEADLDALMRKTMNLTGATYGRNVPAASHTGGHTCGDEGDGMDSSVVPA
RTVDLDSGYQGGAAEAKGPTNAATGVAWRKARRWSVEAAAGMMDVTVRDV
ARAFGLNFDLQRVMTRGHTIFGFFDDVPPSWGREQGSKGGEGCREGRATE
GSWLGKEDDGLEKDGAGAQTGVLSGDMAKLNRCLAEAFSTEKPSKELFRE
VEIAFRARGVRTRFLAILSQPRSKRMIQRHQFLIGGGTSGHFRVHSTGFE
ALMQLASAVCDACVVDRDFPTAHALLQLMGKYYRVLEGGGGGNHAWAAAT
LRQGEGGAGAQQQHKEFLSSRLRHHQIYQCVELWMHVLEEQLGAGKGPTA
TRRDSTNVNSVNGFKLAKAPGAKTTNRDLPSVAEADDPSSVGTVDVKAGG
KGKGSALGQGEAAAEETPGSEMDDAEVDPRKFILRVKSILAEMHGVGMPD
HRALAFVGRICEVHEAGMESKQALVRLVQKIWGISPAPTPQQMFISQEPV
NRGESVGSDAPRPAASSSSSSTSPAWTSPEGIAPMVPPRRVSFQGVGSEM
GRRSSDSIGDSVRKNSTLLNDLRGPSPSPSFSSTVSSSSSGARLHRSTSP
ISHLMGGMGLGLGMGSAAPPEASMHRGPVLSVDVDAAGSVGVSGGADKLL
IVYSLQQRSRITSFWGHTGPVTCVKIFRDHANDPLVASASMDSTLRIWKL
GGGGGGDPGAFTGARLLSSFTTAKDVRHILTGHAKGIVCLDKCEDLQLLA
TGAMDRAVKLWNVSQGRNTATLIGHTRTVNSLRFMDQSQGYRILSAGQDR
TMILWDSGRGSCIRVFKGHESWIRQVEAWGRDLAVTASNDRTLRVWDLRV
HNCVQKLAEHKGAVTCMQVSKEQDAPVVYSGSTDSTVKIWDLRGGGGRCT
ATLEGHAEAVTGLALESPMAAGIGKSKNGGGSKLVHQKLVSVGEDKRVVE
WDTRTGALLQSRMGHSDGISCVQVSKYGVIVTGSWDASVRLWEGIQISV
back to top
Synonyms
Publications