NO01G04240, NO01G04240 (gene) Nannochloropsis oceanica

Overview
NameNO01G04240
Unique NameNO01G04240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1662
Alignment locationchr1:1133017..1134678 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1133017..1134678 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005113uDENN_dom
IPR000008C2_dom
Homology
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: XP_009529609.1 (hypothetical protein PHYSODRAFT_507383 [Phytophthora sojae] >EGZ15860.1 hypothetical protein PHYSODRAFT_507383 [Phytophthora sojae])

HSP 1 Score: 73.6 bits (179), Expect = 2.200e-9
Identity = 71/298 (23.83%), Postives = 120/298 (40.27%), Query Frame = 0 
Query:  115 VTWHEDFVFEGVKASQQVVVTCFMHRQSSGN-----DGCGTSC-SVVGEVQIPVGRLPEAHPIEQWYQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHGVSEMSHNGGSGPGGVPMTPTSLGLTTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPTPSNMSELAQEELPTGLVDYFCIMGPRIDPSTNLP-SLTNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGV-SSYGVCL-HFHRR 404
            + W E+F  E V +S ++V+ C    +   +     +G  +SC   +G+V +P+ RLPE   +EQWY L                                                 VS+ S +       V +     G+ TT +     + +  T   +   A  + L          SPV  P+P+P +++  A   + +G++DY  ++G       ++P SL    +  R+PL D+ + PLP   ++FCFP G  +   +  PK    ++  V    G+  SY VCL  +HRR
Sbjct:  120 ICWDEEFYMEQVSSSDELVLFCVDRARDETHASLPLEGDVSSCPGFIGKVSLPLTRLPEGQEVEQWYPL-------------------------------------------------VSKESSSSLRTALRVSLCFVPNGILTTRSQSPERRRVTPTSVLISSPATEISL---------ASPVTKPLPSPDSVNS-AAITVKSGVIDYVIVVGTA--AGNDVPTSLDEAQVRFRYPLTDRLDFPLPTKIEWFCFPGGPEIVTQAERPKTKLFSFVLVGGDDGLCRSYVVCLVVYHRR 356
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: CBN76592.1 (WD-40 repeat protein [Ectocarpus siliculosus])

HSP 1 Score: 72.0 bits (175), Expect = 6.500e-9
Identity = 69/215 (32.09%), Postives = 94/215 (43.72%), Query Frame = 0 
Query:  308 EELPTGLVDYFCIMGPRIDPS------------------------------TNLPSL---TNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGVSSYGVCLHFHRRWDKVSQGVLSPSVGLLGIDNNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVWAPVCLCLLTRVPVVQPLLTWL 490
            E LP GLVDYF ++GP  +                                  LP+       A+L   P + + + P P   ++FCFP G+ L   S   +PAP   +FV   SGV SYG+CL F+R  D + +   +P V       N A                    XXXXXXXXXXXX        +W P+CLC+LT +PV++ L+ WL
Sbjct:  399 EVLPAGLVDYFLVVGPAANEEGKLKVADYADCGFGSSGATAGRGGGSGPGVDELPATAVEVESAVLEHFPEEQREDAPFPTKVEWFCFPQGLFLR--SAASQPAPHVSSFVRFTSGVRSYGLCLTFYRPVDVLEE--TNPFVAESAPRGNEA-------------GEGGGQSXXXXXXXXXXXXPPGQRRRRLWCPICLCVLTHIPVLEGLMHWL 596
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: XP_002909024.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY57838.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 67.0 bits (162), Expect = 2.100e-7
Identity = 87/392 (22.19%), Postives = 142/392 (36.22%), Query Frame = 0 
Query:   27 GNAANGTLELRVIEAADLVERRKERKQRSFFAGMTDSNSESSRREYAW-PFVTIRAGEDPT--RRTMPGVLS--LGNEGSXXXXXXXXXXXXMVTWHEDFVFEGVKASQQVVVTCFMHRQSSGN-----DGCGTSCS-VVGEVQIPVGRLPEAHPIEQWYQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHGVSEMSHNGGSGPGGVPMTPTSLGLTTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPTPSNMSELAQEELPTGLVDYFCIMGPRIDPSTNLPSLTNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGV-SSYGVCLHFHRRWDK 407
            G    G L +RV++A DL   +          G+  ++S        W PF   R    PT     +P ++S  L    S             + W E+F  E V ++ ++ + C    ++  +      G  +SC+  +G+V +P+ RLPE   +EQWY L                                               +GV     +  + P    +TPTS+                     LPP  A  +           SPV   +   +  SE A   L TG++DY  ++G   +   +  +L    +  R+PL D+P+ PLP   ++FCFP G  +   ++ P     ++  V    G+   Y VCL  + R  K
Sbjct:   36 GQVIVGALRIRVLQAIDLPSPKAVEN------GIVVTSS--------WLPFPGRRPSNHPTLQHEAVPDMISVLLRVSNSGFFATESRAWASAICWDEEFYVEQVSSTDELELFCVDRMRNKTHARLPLQGEISSCAGFIGKVTLPLARLPEGQEVEQWYPLVRKDSSSALRTALRVSLCFVP--------------------------NGVPA---SASTSPERRRVTPTSM---------------------LPPSPATEISS--------ASPVSKQLRVET--SEAAAIPLETGIIDYVIVVGTAANDDIS-ATLDEAQVRFRYPLTDRPDFPLPTKIEWFCFPGGPEIVTQADRPPSKLFSFVLVGGDDGLCRCYVVCLVVYHRHSK 352
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: XP_002895087.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY60471.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 67.0 bits (162), Expect = 2.100e-7
Identity = 87/392 (22.19%), Postives = 142/392 (36.22%), Query Frame = 0 
Query:   27 GNAANGTLELRVIEAADLVERRKERKQRSFFAGMTDSNSESSRREYAW-PFVTIRAGEDPT--RRTMPGVLS--LGNEGSXXXXXXXXXXXXMVTWHEDFVFEGVKASQQVVVTCFMHRQSSGN-----DGCGTSCS-VVGEVQIPVGRLPEAHPIEQWYQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHGVSEMSHNGGSGPGGVPMTPTSLGLTTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPTPSNMSELAQEELPTGLVDYFCIMGPRIDPSTNLPSLTNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGV-SSYGVCLHFHRRWDK 407
            G    G L +RV++A DL   +          G+  ++S        W PF   R    PT     +P ++S  L    S             + W E+F  E V ++ ++ + C    ++  +      G  +SC+  +G+V +P+ RLPE   +EQWY L                                               +GV     +  + P    +TPTS+                     LPP  A  +           SPV   +   +  SE A   L TG++DY  ++G   +   +  +L    +  R+PL D+P+ PLP   ++FCFP G  +   ++ P     ++  V    G+   Y VCL  + R  K
Sbjct:   36 GQVIVGALRIRVLQAIDLPSPKAVEN------GIVVTSS--------WLPFPGRRPSNHPTLQHEAVPDMISVLLRVSNSGFFATESRAWASAICWDEEFYVEQVSSTDELELFCVDRMRNKTHARLPLQGEISSCAGFIGKVTLPLARLPEGQEVEQWYPLVRKDSSSALRTALRVSLCFVP--------------------------NGVPA---SASTSPERRRVTPTSM---------------------LPPSPATEISS--------ASPVSKQLRVET--SEAAAIPLETGIIDYVIVVGTAANDDIS-ATLDEAQVRFRYPLTDRPDFPLPTKIEWFCFPGGPEIVTQADRPPSKLFSFVLVGGDDGLCRCYVVCLVVYHRHSK 352
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: ETI48177.1 (hypothetical protein F443_07733 [Phytophthora parasitica P1569] >ETI48178.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETL94634.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL94635.1 hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 66.2 bits (160), Expect = 3.600e-7
Identity = 69/298 (23.15%), Postives = 111/298 (37.25%), Query Frame = 0 
Query:  115 VTWHEDFVFEGVKASQQVVVTCFMHRQSSGN-----DGCGTSC-SVVGEVQIPVGRLPEAHPIEQWYQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHGVSEMSHNGGSGPGGVPMTPTSLGLTTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPT-PSNMSELAQEELPTGLVDYFCIMGPRIDPSTNLPSLTNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGV-SSYGVCL-HFHRR 404
            + W E+F  E V ++ +V + C    ++  +      G  +SC   +G+V +P+ RLPE   +EQWY L                                               +GV          P  V  TP    +T T                LPP  A  +           SPV   +    S  +  A   L +G++DY  ++G  ++   N  SL    +  R+P+ D+P+ PLP   ++FCFP G  +   ++ P+    ++  V    G+   Y VCL  +HRR
Sbjct:  115 ICWDEEFYMEQVSSNDEVELFCLDRVRNKTHASLPLQGDISSCPGYIGKVTLPLTRLPEGQEVEQWYPLVRKESSSALRTALRVSLYFVP--------------------------NGV----------PASVSQTPERGRVTPT--------------SMLPPSPATEISS--------ASPVSNQLRVETSEAANAATIPLESGIIDYVIVVGAAVN-GDNSSSLDEAQVRFRYPITDRPDFPLPTKVEWFCFPGGPEIVTQADRPQSKIFSFVLVGGDDGLCRCYVVCLVVYHRR 353
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: ETL94633.1 (hypothetical protein L917_07394 [Phytophthora parasitica])

HSP 1 Score: 66.2 bits (160), Expect = 3.600e-7
Identity = 69/298 (23.15%), Postives = 111/298 (37.25%), Query Frame = 0 
Query:  115 VTWHEDFVFEGVKASQQVVVTCFMHRQSSGN-----DGCGTSC-SVVGEVQIPVGRLPEAHPIEQWYQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHGVSEMSHNGGSGPGGVPMTPTSLGLTTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPT-PSNMSELAQEELPTGLVDYFCIMGPRIDPSTNLPSLTNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGV-SSYGVCL-HFHRR 404
            + W E+F  E V ++ +V + C    ++  +      G  +SC   +G+V +P+ RLPE   +EQWY L                                               +GV          P  V  TP    +T T                LPP  A  +           SPV   +    S  +  A   L +G++DY  ++G  ++   N  SL    +  R+P+ D+P+ PLP   ++FCFP G  +   ++ P+    ++  V    G+   Y VCL  +HRR
Sbjct:  115 ICWDEEFYMEQVSSNDEVELFCLDRVRNKTHASLPLQGDISSCPGYIGKVTLPLTRLPEGQEVEQWYPLVRKESSSALRTALRVSLYFVP--------------------------NGV----------PASVSQTPERGRVTPT--------------SMLPPSPATEISS--------ASPVSNQLRVETSEAANAATIPLESGIIDYVIVVGAAVN-GDNSSSLDEAQVRFRYPITDRPDFPLPTKVEWFCFPGGPEIVTQADRPQSKIFSFVLVGGDDGLCRCYVVCLVVYHRR 353
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: ETM47923.1 (hypothetical protein L914_07481 [Phytophthora parasitica] >ETM47924.1 hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 66.2 bits (160), Expect = 3.600e-7
Identity = 69/298 (23.15%), Postives = 111/298 (37.25%), Query Frame = 0 
Query:  115 VTWHEDFVFEGVKASQQVVVTCFMHRQSSGN-----DGCGTSC-SVVGEVQIPVGRLPEAHPIEQWYQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHGVSEMSHNGGSGPGGVPMTPTSLGLTTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPT-PSNMSELAQEELPTGLVDYFCIMGPRIDPSTNLPSLTNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGV-SSYGVCL-HFHRR 404
            + W E+F  E V ++ +V + C    ++  +      G  +SC   +G+V +P+ RLPE   +EQWY L                                               +GV          P  V  TP    +T T                LPP  A  +           SPV   +    S  +  A   L +G++DY  ++G  ++   N  SL    +  R+P+ D+P+ PLP   ++FCFP G  +   ++ P+    ++  V    G+   Y VCL  +HRR
Sbjct:  115 ICWDEEFYMEQVSSNDEVELFCLDRVRNKTHASLPLQGDISSCPGYIGKVTLPLTRLPEGQEVEQWYPLVRKESSSALRTALRVSLYFVP--------------------------NGV----------PASVSQTPERGRVTPT--------------SMLPPSPATEISS--------ASPVSNQLRVETSEAANAATIPLESGIIDYVIVVGAAVN-GDNSSSLDEAQVRFRYPITDRPDFPLPTKVEWFCFPGGPEIVTQADRPQSKIFSFVLVGGDDGLCRCYVVCLVVYHRR 353
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: XP_008904401.1 (hypothetical protein PPTG_10749 [Phytophthora parasitica INRA-310] >ETN09964.1 hypothetical protein PPTG_10749 [Phytophthora parasitica INRA-310])

HSP 1 Score: 66.2 bits (160), Expect = 3.600e-7
Identity = 69/298 (23.15%), Postives = 111/298 (37.25%), Query Frame = 0 
Query:  115 VTWHEDFVFEGVKASQQVVVTCFMHRQSSGN-----DGCGTSC-SVVGEVQIPVGRLPEAHPIEQWYQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHGVSEMSHNGGSGPGGVPMTPTSLGLTTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPT-PSNMSELAQEELPTGLVDYFCIMGPRIDPSTNLPSLTNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGV-SSYGVCL-HFHRR 404
            + W E+F  E V ++ +V + C    ++  +      G  +SC   +G+V +P+ RLPE   +EQWY L                                               +GV          P  V  TP    +T T                LPP  A  +           SPV   +    S  +  A   L +G++DY  ++G  ++   N  SL    +  R+P+ D+P+ PLP   ++FCFP G  +   ++ P+    ++  V    G+   Y VCL  +HRR
Sbjct:  115 ICWDEEFYMEQVSSNDEVELFCLDRVRNKTHASLPLQGDISSCPGYIGKVTLPLTRLPEGQEVEQWYPLVRKESSSALRTALRVSLYFVP--------------------------NGV----------PASVSQTPERGRVTPT--------------SMLPPSPATEISS--------ASPVSNQLRVETSEAANAATIPLESGIIDYVIVVGAAVN-GDNSSSLDEAQVRFRYPITDRPDFPLPTKVEWFCFPGGPEIVTQADRPQSKIFSFVLVGGDDGLCRCYVVCLVVYHRR 353
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: XP_008904402.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >XP_008904403.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETN09965.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETN09966.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310])

HSP 1 Score: 66.2 bits (160), Expect = 3.600e-7
Identity = 69/298 (23.15%), Postives = 111/298 (37.25%), Query Frame = 0 
Query:  115 VTWHEDFVFEGVKASQQVVVTCFMHRQSSGN-----DGCGTSC-SVVGEVQIPVGRLPEAHPIEQWYQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHGVSEMSHNGGSGPGGVPMTPTSLGLTTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPT-PSNMSELAQEELPTGLVDYFCIMGPRIDPSTNLPSLTNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGV-SSYGVCL-HFHRR 404
            + W E+F  E V ++ +V + C    ++  +      G  +SC   +G+V +P+ RLPE   +EQWY L                                               +GV          P  V  TP    +T T                LPP  A  +           SPV   +    S  +  A   L +G++DY  ++G  ++   N  SL    +  R+P+ D+P+ PLP   ++FCFP G  +   ++ P+    ++  V    G+   Y VCL  +HRR
Sbjct:  115 ICWDEEFYMEQVSSNDEVELFCLDRVRNKTHASLPLQGDISSCPGYIGKVTLPLTRLPEGQEVEQWYPLVRKESSSALRTALRVSLYFVP--------------------------NGV----------PASVSQTPERGRVTPT--------------SMLPPSPATEISS--------ASPVSNQLRVETSEAANAATIPLESGIIDYVIVVGAAVN-GDNSSSLDEAQVRFRYPITDRPDFPLPTKVEWFCFPGGPEIVTQADRPQSKIFSFVLVGGDDGLCRCYVVCLVVYHRR 353
[Close]
BLAST of NO01G04240 vs. NCBI_GenBank
Match: ETO76916.1 (hypothetical protein F444_07800 [Phytophthora parasitica P1976] >ETO76917.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 66.2 bits (160), Expect = 3.600e-7
Identity = 69/298 (23.15%), Postives = 111/298 (37.25%), Query Frame = 0 
Query:  115 VTWHEDFVFEGVKASQQVVVTCFMHRQSSGN-----DGCGTSC-SVVGEVQIPVGRLPEAHPIEQWYQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHGVSEMSHNGGSGPGGVPMTPTSLGLTTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPT-PSNMSELAQEELPTGLVDYFCIMGPRIDPSTNLPSLTNGAILLRHPLQDKPEQPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGV-SSYGVCL-HFHRR 404
            + W E+F  E V ++ +V + C    ++  +      G  +SC   +G+V +P+ RLPE   +EQWY L                                               +GV          P  V  TP    +T T                LPP  A  +           SPV   +    S  +  A   L +G++DY  ++G  ++   N  SL    +  R+P+ D+P+ PLP   ++FCFP G  +   ++ P+    ++  V    G+   Y VCL  +HRR
Sbjct:  115 ICWDEEFYMEQVSSNDEVELFCLDRVRNKTHASLPLQGDISSCPGYIGKVTLPLTRLPEGQEVEQWYPLVRKESSSALRTALRVSLYFVP--------------------------NGV----------PASVSQTPERGRVTPT--------------SMLPPSPATEISS--------ASPVSNQLRVETSEAANAATIPLESGIIDYVIVVGAAVN-GDNSSSLDEAQVRFRYPITDRPDFPLPTKVEWFCFPGGPEIVTQADRPQSKIFSFVLVGGDDGLCRCYVVCLVVYHRR 353
The following BLAST results are available for this feature:
BLAST of NO01G04240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 14
Match NameE-valueIdentityDescription
XP_009529609.12.200e-923.83hypothetical protein PHYSODRAFT_507383 [Phytophtho... [more]
CBN76592.16.500e-932.09WD-40 repeat protein [Ectocarpus siliculosus][more]
XP_002909024.12.100e-722.19conserved hypothetical protein [Phytophthora infes... [more]
XP_002895087.12.100e-722.19conserved hypothetical protein [Phytophthora infes... [more]
ETI48177.13.600e-723.15hypothetical protein F443_07733 [Phytophthora para... [more]
ETL94633.13.600e-723.15hypothetical protein L917_07394 [Phytophthora para... [more]
ETM47923.13.600e-723.15hypothetical protein L914_07481 [Phytophthora para... [more]
XP_008904401.13.600e-723.15hypothetical protein PPTG_10749 [Phytophthora para... [more]
XP_008904402.13.600e-723.15hypothetical protein, variant 1 [Phytophthora para... [more]
ETO76916.13.600e-723.15hypothetical protein F444_07800 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL003nonsL003Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR087ngnoR087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007869NSK007869Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04240.1NO01G04240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|657980gene_440Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04240.1NO01G04240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04240 ID=NO01G04240|Name=NO01G04240|organism=Nannochloropsis oceanica|type=gene|length=1662bp
ATGCGCGAGTCCTCATTCTACGATAATGCCACAGAGAAAGAAGGTCCAAG
CTCTTGCGGCCCTCATAGCCGCAACAGCGGCAACGCCGCAAATGGAACCT
TGGAGCTGCGCGTAATCGAAGCAGCCGATCTTGTGGAACGACGCAAGGAG
CGAAAACAACGCAGCTTCTTCGCAGGAATGACCGATTCCAATTCGGAATC
ATCGCGTAGGGAATATGCCTGGCCCTTTGTGACCATCCGGGCAGGCGAAG
ACCCGACCCGACGAACTATGCCAGGGGTCCTTTCTTTAGGTAACGAAGGA
AGCAACAGCAGCAGCGGCAGCAGCAGCAGTGGTGGTGGGATGGTGACATG
GCACGAGGACTTTGTGTTTGAGGGCGTCAAGGCCAGTCAGCAGGTGGTGG
TGACGTGCTTCATGCATCGACAATCCTCGGGAAATGATGGGTGTGGTACT
TCGTGCTCCGTTGTCGGTGAGGTCCAAATTCCTGTCGGGAGGTTACCCGA
GGCCCACCCAATTGAGCAGTGGTATCAGCTGACGTCCAGTAGCGGAGGAG
GAGGGTTAGGGGGAAGTAAAACCAGCAAGGCTGCTATCAAGCTGCGGTTG
TTCTACCAGGTGCGAGACGAAAGCCTAGCTGCAGGGGCAGCAGGAGGAGG
AGGAGGAAGTACAGCACACCGGCATGGAGTGTCGGAAATGAGCCACAACG
GTGGCAGCGGACCAGGCGGAGTCCCCATGACACCCACCTCTCTCGGTCTC
ACAACAACACTTGCCAACCTCGACATGACTCAATCCCTCGAAAGCACCCA
ACAGCCCCTGCCTCCCGTCGCCGCGCCTGTCCTCCTTGGAGGCGGCATGG
AGGGACCACTGCCTACTTCTCCCGTACACGCCCCCATCCCCACCCCCAGC
AACATGTCCGAACTCGCTCAAGAAGAGCTTCCCACGGGCCTAGTGGACTA
TTTCTGCATCATGGGTCCCCGCATTGATCCCAGCACCAACCTCCCCTCCC
TCACCAACGGTGCCATCCTCCTCCGGCACCCTCTCCAGGACAAACCCGAG
CAGCCCCTTCCCGAAAGCCCCCAATTCTTCTGTTTTCCCGCAGGCATGGC
CTTAGCTTATGGATCGAATCCTCCTAAGCCAGCACCGCTTGCTTATACCT
TCGTGATAAAGCATTCGGGTGTGTCGTCCTATGGGGTCTGTCTACACTTC
CATCGACGTTGGGATAAGGTTTCCCAAGGGGTTTTGTCGCCCTCCGTGGG
ATTGCTTGGAATCGATAACAACACCGCAAAGAGCAGCAGCAGCAGCAATA
ACAAGACCACCACTAGTTGCAGCAACCGCAACAGCAACAGCAGCAACAGC
AACAGCAACAGCAGAAGAAGCAGCAGTACGAGCAAGCAGCCCACTACCGT
GTGGGCGCCCGTGTGCCTATGTCTGTTGACACGGGTGCCCGTGGTCCAAC
CGCTCCTGACCTGGCTTGTCCACGCCTACGACAACCTCGACCTTCTACTC
CCCCCCACCTACGATGCCCTCCTCCAAGACTCCCTCCTGTCTTCCCCATC
CGTCCCCTCCCCCCTCTTTCCTCCTCCCCTGGCGCCCACCTCTCCTCCCT
CCTCCGCATGCATATCGTACAGCTCACCCTTGAAGTCCCTCTCCCCATCC
CTGGGGCTCTAG
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protein sequence of NO01G04240.1

>NO01G04240.1-protein ID=NO01G04240.1-protein|Name=NO01G04240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=554bp
MRESSFYDNATEKEGPSSCGPHSRNSGNAANGTLELRVIEAADLVERRKE
RKQRSFFAGMTDSNSESSRREYAWPFVTIRAGEDPTRRTMPGVLSLGNEG
SNSSSGSSSSGGGMVTWHEDFVFEGVKASQQVVVTCFMHRQSSGNDGCGT
SCSVVGEVQIPVGRLPEAHPIEQWYQLTSSSGGGGLGGSKTSKAAIKLRL
FYQVRDESLAAGAAGGGGGSTAHRHGVSEMSHNGGSGPGGVPMTPTSLGL
TTTLANLDMTQSLESTQQPLPPVAAPVLLGGGMEGPLPTSPVHAPIPTPS
NMSELAQEELPTGLVDYFCIMGPRIDPSTNLPSLTNGAILLRHPLQDKPE
QPLPESPQFFCFPAGMALAYGSNPPKPAPLAYTFVIKHSGVSSYGVCLHF
HRRWDKVSQGVLSPSVGLLGIDNNTAKSSSSSNNKTTTSCSNRNSNSSNS
NSNSRRSSSTSKQPTTVWAPVCLCLLTRVPVVQPLLTWLVHAYDNLDLLL
PPTYDALLQDSLLSSPSVPSPLFPPPLAPTSPPSSACISYSSPLKSLSPS
LGL*
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