NO01G04110, NO01G04110 (gene) Nannochloropsis oceanica

Overview
NameNO01G04110
Unique NameNO01G04110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2377
Alignment locationchr1:1097761..1100137 -

Link to JBrowse

Properties
Property NameValue
DescriptionAcetyl-coenzyme A synthetase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1097761..1100137 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR032387ACAS_N
IPR000873AMP-dep_Synth/Lig
IPR025110AMP-bd_C
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Homology
BLAST of NO01G04110 vs. NCBI_GenBank
Match: EWM29348.1 (acetyl-coenzyme a synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1234.6 bits (3193), Expect = 0.000e+0
Identity = 577/658 (87.69%), Postives = 621/658 (94.38%), Query Frame = 0
Query:    1 MAQMLSPRPGVELQEHTTFKPIAPIHKLAQYKEMHRHSLDKPDEFWREQAHQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRTGATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLITAIALKVKRA 659
            M  M+SPRPG+ +QEHT  KPIAP+H+LAQYKE+H++SL+  DEFWR +AH+YL+WFSDFDRV QGSF EGDVAWFLNG+LNASVCCIDQHLPHRQDQ AILWEGDEPG  R+ITYKELY++VCRLANAMKA+GVR+GDVVMLYLPMVPEVV AMLACARIGAPHSVVFAGFSAEALRDRIND +SKW+MTTDEGKRGGKTLPLK IVDKAL+ AP V+HCF+F+RTGA V WV GRDVKM EVM QQRPY PAE MDSEDLLFILYTSGSTGKPKGVAHTTAGYLL+AAMTHKTVFD+QEGDVYACVADCGWITGHSYIVYGPLVNG TT+LFESIPTYPNHCRYWDLIQRH+VTQFYTAPTAIRALMR+GTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVG +RCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPF+GVELAL+DP++G+EL GNDVEGVLCVKRPWPS+TRTVFGDH RY TVY++PYKG+YFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGH AVSEAAVVGFPH VKGEGICCFVT+REGV ESP LEKELKQAVRDAIGAFATPD++C TPSLPKTRSGKIMRR+LRKIASGESDSLGD+STLADPSVV YLITAIALKVK A
Sbjct:    1 MQAMVSPRPGIHVQEHTIVKPIAPVHQLAQYKELHQYSLENSDEFWRREAHKYLKWFSDFDRVSQGSFIEGDVAWFLNGKLNASVCCIDQHLPHRQDQVAILWEGDEPGHCRSITYKELYRDVCRLANAMKAMGVRRGDVVMLYLPMVPEVVMAMLACARIGAPHSVVFAGFSAEALRDRINDTNSKWVMTTDEGKRGGKTLPLKQIVDKALKEAPSVQHCFVFERTGAPVDWVPGRDVKMSEVMAQQRPYSPAETMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLFAAMTHKTVFDLQEGDVYACVADCGWITGHSYIVYGPLVNGATTLLFESIPTYPNHCRYWDLIQRHRVTQFYTAPTAIRALMRYGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGNARCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFYGVELALIDPSTGQELAGNDVEGVLCVKRPWPSMTRTVFGDHARYLTVYMQPYKGYYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHAAVSEAAVVGFPHAVKGEGICCFVTLREGVFESPALEKELKQAVRDAIGAFATPDIVCPTPSLPKTRSGKIMRRVLRKIASGESDSLGDVSTLADPSVVPYLITAIALKVKTA 658          
BLAST of NO01G04110 vs. NCBI_GenBank
Match: XP_005854118.1 (acyl-CoA synthetase [Nannochloropsis gaditana CCMP526] >EKU22239.1 acyl-CoA synthetase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1157.9 bits (2994), Expect = 0.000e+0
Identity = 543/603 (90.05%), Postives = 575/603 (95.36%), Query Frame = 0
Query:   56 WFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRTGATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLITAIALKVKRA 659
            WFSDFDRV QGSF EGDVAWFLNG+LNASVCCIDQHLPHRQDQ AILWEGDEPG  R+ITYKELY++VCRLANAMKA+GVR+GDVVMLYLPMVPEVV AMLACARIGAPHSVVFAGFSAEALRDRIND +SKW+MTTDEGKRGGKTLPLK IVDKAL+ AP V+HCF+F+RTGA V WV GRDVKM EVM QQRPYCPAE MDSEDLLFILYTSGSTGKPKGVAHTTAGYLL+AAMTHKTVFD+QEGDVYACVADCGWITGHSYIVYGPLVNG TT+LFESIPTYPNHCRYWDLIQRH+VTQFYTAPTAIRALMR+GTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVG +RCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPF+GVELAL+DP++G+EL GNDVEGVLCVKRPWPS+TRTVFGDH RY TVY++PYKG+YFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGH AVSEAAVVGFPH VKGEGICCFVT+REGV ESP LEKELKQAVRDAIGAFATPD++C TPSLPKTRSGKIMRR+LRKIASGESDSLGD+STLADPSVV YLITAIALKVK A
Sbjct:    5 WFSDFDRVSQGSFIEGDVAWFLNGKLNASVCCIDQHLPHRQDQVAILWEGDEPGHCRSITYKELYRDVCRLANAMKAMGVRRGDVVMLYLPMVPEVVMAMLACARIGAPHSVVFAGFSAEALRDRINDTNSKWVMTTDEGKRGGKTLPLKQIVDKALKEAPSVQHCFVFERTGAPVDWVPGRDVKMSEVMAQQRPYCPAETMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLFAAMTHKTVFDLQEGDVYACVADCGWITGHSYIVYGPLVNGATTLLFESIPTYPNHCRYWDLIQRHRVTQFYTAPTAIRALMRYGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGNARCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFYGVELALIDPSTGQELAGNDVEGVLCVKRPWPSMTRTVFGDHARYLTVYMQPYKGYYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHAAVSEAAVVGFPHAVKGEGICCFVTLREGVFESPALEKELKQAVRDAIGAFATPDIVCPTPSLPKTRSGKIMRRVLRKIASGESDSLGDVSTLADPSVVPYLITAIALKVKTA 607          
BLAST of NO01G04110 vs. NCBI_GenBank
Match: CBN79823.1 (Acetyl-coenzyme A synthetase [Ectocarpus siliculosus])

HSP 1 Score: 911.0 bits (2353), Expect = 2.200e-261
Identity = 438/630 (69.52%), Postives = 503/630 (79.84%), Query Frame = 0
Query:   31 YKEMHRHSLDKPDEFWREQAHQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRTGATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLI---TAIALKVKR 658
            Y+ MH+ SL++PD FW + A   L+WF DFDRV QG F+ GDVAWF  G+LNA   CIDQHLP R  Q AIL EGDEPG    ITY++L  +VCR+ANAMK LGV+KGD V LY+PMVPE   AMLACAR+GAPHSVVFAGFSAEALRDRI DA+SKW+ TTDEG+RGGKTL LKSIVDKA+E A  V    +   TGA V  +  RDV+M E++ + RPYCP E MDSEDLLFILYTSGSTG+PKGVAHTTAGYLLY  MT K  F ++EGDV+ACVAD GWITGHSYIVYGPLVNG T+++FES P YPNH RYWD++QRHKVTQFYTAPTAIRALM  G E I+ +D SSLRVLGSVGEPINPEAW+WY EHVG+ +C IVDT+WQTETGGH+  PL  VTP KPGSC+ PFFG+E A+++  +G+E+ GNDVEGVL  KRPWPS+ RTV+GDH+RY  VYL PYKG+YFTGDG  RD+DG+YWITGRVDDVLN SGHRIGTAEVESALV H AVSEAAVVGFP P+KG+ ICC+VT   G  ESPEL KEL + V   IG FA P +I GTP LPKTRSGKIMRRILRKIA GE+D LGD STLADPS+V  L+    A+  K+KR
Sbjct:   60 YEAMHKQSLEEPDTFWGDAARSTLKWFRDFDRVSQGGFDTGDVAWFTGGQLNACYNCIDQHLPQRAKQVAILHEGDEPGVVTKITYEDLLGQVCRMANAMKELGVKKGDFVTLYMPMVPEAAVAMLACARLGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGAKVP-MGKRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISDYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIVGTPGLPKTRSGKIMRRILRKIAEGEADKLGDTSTLADPSIVEGLVEKANALLGKMKR 688          
BLAST of NO01G04110 vs. NCBI_GenBank
Match: OQR98792.1 (acetyl-coenzyme A synthetase [Achlya hypogyna])

HSP 1 Score: 892.5 bits (2305), Expect = 7.900e-256
Identity = 420/627 (66.99%), Postives = 496/627 (79.11%), Query Frame = 0
Query:   23 APIHKLAQYKEMHRHSLDKPDEFWREQAHQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRT-GATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLI 649
            A +  +A Y+ M++ S++ P+ FW E+A + L WF DFD    G F +GDVAWFLNG+LN S  CID+H+  R D+TAILWE DEPG  R ITYKEL  E C++ANAM A GVRKGD V +Y+PM+PE +  MLAC RIGA HS+VFAGFSAEALRDRI DA SKW+ T DEGKRGG+TLPLK  VD+A+ G   V++ F+F+RT    V +    DV M +V+   RPYCPAE MDSEDL+FILYTSGSTGKPKGVAHTT GYL YAA T K  FD+QE DVYACVADCGWITGHSYIVYGPL NG TT++FES P YP+  RYWDL+QR+K+T+FYTAPTAIRALM  G E +  +DRSSL+VLG+VGEPINPEAWKWYFE VG+ +C I DT+WQTETGGH+   LPG TPMK GSC LPFFG++ A++D A GKEL GN VEG LC+K PWP + RTV+GDH RY +VY+ P+ G+YFTGDGARRDADGYYWITGR+DDVL+TSGHRIGTAEVESALV H+ V+EAAVVGFPH VKGEGICC++T+  GV  S  ++KEL Q VR  IGAFATPD+I   P LPKTRSGKIMRRILRKIA GE +S+GD+STLA+P VV  +I
Sbjct:   26 AHVQGMAAYQAMYKKSIEDPETFWGEKARECLTWFHDFDLAHYGGFNKGDVAWFLNGKLNVSTNCIDRHIASRGDKTAILWESDEPGVHRRITYKELLAETCQIANAMLAHGVRKGDTVAIYMPMIPECIMVMLACTRIGAVHSIVFAGFSAEALRDRIIDAQSKWVFTADEGKRGGRTLPLKKTVDEAIHGVHVVKNVFVFKRTNNPKVPFHPKIDVDMTKVLPLMRPYCPAEWMDSEDLMFILYTSGSTGKPKGVAHTTGGYLAYAATTAKYTFDLQEDDVYACVADCGWITGHSYIVYGPLANGATTLMFESTPMYPDCGRYWDLVQRYKITKFYTAPTAIRALMAHGEEFVKKYDRSSLKVLGTVGEPINPEAWKWYFEVVGDKQCMIADTYWQTETGGHIGVGLPGATPMKAGSCGLPFFGIDFAILDDA-GKELQGNSVEGRLCIKSPWPGLARTVYGDHHRYLSVYMMPHPGYYFTGDGARRDADGYYWITGRIDDVLSTSGHRIGTAEVESALVAHNVVTEAAVVGFPHRVKGEGICCYITLIHGVDGSASVQKELAQQVRAHIGAFATPDIIVFVPGLPKTRSGKIMRRILRKIAHGEEESIGDVSTLAEPDVVEQII 651          
BLAST of NO01G04110 vs. NCBI_GenBank
Match: XP_008607286.1 (acetyl-CoA synthetase [Saprolegnia diclina VS20] >EQC39225.1 acetyl-CoA synthetase [Saprolegnia diclina VS20])

HSP 1 Score: 888.3 bits (2294), Expect = 1.500e-254
Identity = 420/627 (66.99%), Postives = 495/627 (78.95%), Query Frame = 0
Query:   23 APIHKLAQYKEMHRHSLDKPDEFWREQAHQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRT-GATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLI 649
            A +  +A Y++ ++ S++ P+ FW E+A + L WF DFD    G FE+GDVAWFLNG+LN S  CID+H+  R D+TAILWE DEPG  R ITYKEL  E C++ANAM A GVRKGD V +Y+PM+PE +  MLAC RIGA HS+VFAGFSAEALRDRI DA SKW+ T DEGKRGG+TLPLK  VD+A+ G   V++ F+F+RT    V +    DV M +V+   RPYCPAE MDSEDL+FILYTSGSTGKPKGVAHTT GYL YAA T K  FD+QE DVYACVADCGWITGHSYIVYGPLVNG TTV+FES P YP+  RYWDL++R+K+T+FYTAPTAIRALM  GTE +  +DRSSL+VLG+VGEPINPEAWKWYFE VG+ +C I DT+WQTETGGH+   LPG  PMK GSC LPFFG++ A++D A GKEL+G +VEG LC+K  WP + RTV+GDH RY +VY  P+ G YFTGDGARRDADGYYWITGR+DDVL+TSGHRIGTAEVESALV H+ V+EAAVVGFPH VKGEGICC++T+  GV  S  + KEL Q VR  IGAFATPD+I   P LPKTRSGKIMRRILRKIA GE DS+GD+STLA+P VV  +I
Sbjct:   53 AHVQGMAAYEKEYKRSIENPEAFWGEKAREALTWFHDFDMAKYGGFEKGDVAWFLNGKLNVSTNCIDRHIATRGDKTAILWESDEPGVHRRITYKELLAETCQIANAMLAHGVRKGDTVAIYMPMIPECIMVMLACTRIGAVHSIVFAGFSAEALRDRIIDAQSKWVFTADEGKRGGRTLPLKKTVDEAIHGVHVVKNVFVFKRTNNPKVPFHPKIDVDMTKVLPLMRPYCPAEWMDSEDLMFILYTSGSTGKPKGVAHTTGGYLTYAATTCKYTFDLQEDDVYACVADCGWITGHSYIVYGPLVNGATTVMFESTPMYPDCGRYWDLVERYKITKFYTAPTAIRALMAHGTEFVTKYDRSSLKVLGTVGEPINPEAWKWYFEVVGDKQCMIADTYWQTETGGHIGVGLPGAAPMKAGSCGLPFFGIDFAILDDA-GKELVGANVEGRLCIKDSWPGLARTVYGDHHRYLSVYTMPHPGHYFTGDGARRDADGYYWITGRIDDVLSTSGHRIGTAEVESALVAHNVVTEAAVVGFPHRVKGEGICCYITLIHGVDGSASVTKELAQQVRGHIGAFATPDIIVFVPGLPKTRSGKIMRRILRKIAHGEEDSIGDVSTLAEPEVVPAII 678          
BLAST of NO01G04110 vs. NCBI_GenBank
Match: XP_012193951.1 (acetate-CoA ligase [Saprolegnia parasitica CBS 223.65] >KDO35623.1 acetate-CoA ligase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 888.3 bits (2294), Expect = 1.500e-254
Identity = 420/627 (66.99%), Postives = 495/627 (78.95%), Query Frame = 0
Query:   23 APIHKLAQYKEMHRHSLDKPDEFWREQAHQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRT-GATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLI 649
            A +  +A Y++ ++ S++ P+ FW E+A + L WF DFD    G FE+GDVAWFLNG+LN S  CID+H+  R D+TAILWE DEPG  R ITYKEL  E C++ANAM A GVRKGD V +Y+PM+PE +  MLAC RIGA HS+VFAGFSAEALRDRI DA SKW+ T DEGKRGG+TLPLK  VD+A+ G   V++ F+F+RT    V +    DV M +V+   RPYCPAE MDSEDL+FILYTSGSTGKPKGVAHTT GYL YAA T K  FD+QE DVYACVADCGWITGHSYIVYGPLVNG TTV+FES P YP+  RYWDL++R+K+T+FYTAPTAIRALM  GTE +  +DRSSL+VLG+VGEPINPEAWKWYFE VG+ +C I DT+WQTETGGH+   LPG  PMK GSC LPFFG++ A++D A GKEL+G +VEG LC+K  WP + RTV+GDH RY +VY  P+ G YFTGDGARRDADGYYWITGR+DDVL+TSGHRIGTAEVESALV H+ V+EAAVVGFPH VKGEGICC++T+  GV  S  + KEL Q VR  IGAFATPD+I   P LPKTRSGKIMRRILRKIA GE DS+GD+STLA+P VV  +I
Sbjct:   64 AHVQGMAAYEKEYKRSIENPEAFWGEKAREALTWFHDFDMAKYGGFEKGDVAWFLNGKLNVSTNCIDRHIATRGDKTAILWESDEPGVHRRITYKELLAETCQIANAMLAHGVRKGDTVAIYMPMIPECIMVMLACTRIGAVHSIVFAGFSAEALRDRIIDAQSKWVFTADEGKRGGRTLPLKKTVDEAIHGVHVVKNVFVFKRTNNPKVPFHPKIDVDMTKVLPLMRPYCPAEWMDSEDLMFILYTSGSTGKPKGVAHTTGGYLTYAATTCKYTFDLQEDDVYACVADCGWITGHSYIVYGPLVNGATTVMFESTPMYPDCGRYWDLVERYKITKFYTAPTAIRALMAHGTEFVKKYDRSSLKVLGTVGEPINPEAWKWYFEVVGDKQCMIADTYWQTETGGHIGVGLPGAAPMKAGSCGLPFFGIDFAILDDA-GKELVGGNVEGRLCIKDSWPGLARTVYGDHHRYLSVYTMPHPGHYFTGDGARRDADGYYWITGRIDDVLSTSGHRIGTAEVESALVAHNVVTEAAVVGFPHRVKGEGICCYITLIHGVDGSASVMKELAQQVRGHIGAFATPDIIVFVPGLPKTRSGKIMRRILRKIAHGEEDSIGDVSTLAEPEVVPAII 689          
BLAST of NO01G04110 vs. NCBI_GenBank
Match: XP_009518711.1 (acetyl-CoA synthetase [Phytophthora sojae] >EGZ23423.1 acetyl-CoA synthetase [Phytophthora sojae])

HSP 1 Score: 875.9 bits (2262), Expect = 7.700e-251
Identity = 411/630 (65.24%), Postives = 486/630 (77.14%), Query Frame = 0
Query:   23 APIHKLAQYKEMHRHSLDKPDEFWREQAHQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRT-GATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLITAI 652
            A I  L QY+ MH+ SL+ PD FW E A + L WF DFD  + GS  +GDVAWFLNG LN SV CID+H+    D+TAI+WE DE G  R I+Y EL +E CR+ANAMK  GV+KGD V +Y+PM+PE VF MLAC RIGA H+++FAG SAEALR R+ DA ++W+ T DEG+RGG+TLPLK  +D A++G   VR+ F+F+RT  A V    G DV ME+ + + RPYCPAE M+SEDLLFILYTSGSTG PKG+AHTT GYLLYA MT K  FDI + DV+ACVADCGWITGHSY+VYGPL NG TTVLFES PTYP+H RYWDL+QRHKVTQFYTAPTAIRALM  G + +  +D SSLRVLGSVGEPINPEAWKWY+E VG  +C IVDT+WQTETGGH+   LPG  PMKP SC+ PFFG++  L D  +G E+ GNDVEG LC++ PWP + RTV+GDH RY  VY   +KG YFTGDG RRD DGYY+ITGR+DDVL  SGHRI T E+ES L+GH AV+EAAVVG PH +KGEGICC+VT+ +GV  SPELEKEL   +R  IGAFATPD+    P LPKTRSGKIMRRILRKIA GE DSL D+STLA+P+VV  LI+A+
Sbjct:   45 AHIQSLEQYEAMHKRSLEDPDGFWGELARENLLWFRDFDETVVGSVSKGDVAWFLNGLLNVSVNCIDRHVKTHPDKTAIIWEADEVGQGREISYTELLEETCRIANAMKLAGVQKGDTVAMYMPMIPETVFVMLACTRIGAVHNMIFAGLSAEALRSRVVDARAQWVFTADEGRRGGRTLPLKRTLDTAIQGLDFVRNVFVFKRTHNAAVEMHPGIDVDMEKELSRHRPYCPAESMNSEDLLFILYTSGSTGTPKGIAHTTGGYLLYAMMTAKYAFDIHDDDVFACVADCGWITGHSYVVYGPLANGITTVLFESTPTYPDHGRYWDLVQRHKVTQFYTAPTAIRALMARGVDKVREYDLSSLRVLGSVGEPINPEAWKWYYEVVGNRQCYIVDTYWQTETGGHIGVGLPGAIPMKPSSCSKPFFGIDFVLTD-ENGVEIEGNDVEGQLCIRSPWPGLARTVYGDHNRYLQVYTSSHKGLYFTGDGCRRDKDGYYFITGRIDDVLCPSGHRISTTELESTLIGHTAVAEAAVVGIPHRIKGEGICCYVTLMDGVNRSPELEKELTMEIRAKIGAFATPDIFVMAPHLPKTRSGKIMRRILRKIAQGEEDSLNDLSTLAEPTVVPELISAM 673          
BLAST of NO01G04110 vs. NCBI_GenBank
Match: OQS00047.1 (acetyl-coenzyme A synthetase [Thraustotheca clavata])

HSP 1 Score: 872.8 bits (2254), Expect = 6.500e-250
Identity = 414/627 (66.03%), Postives = 492/627 (78.47%), Query Frame = 0
Query:   23 APIHKLAQYKEMHRHSLDKPDEFWREQAHQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRT-GATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLI 649
            A I  + QYK+ ++ S++ P+ FW E+A + L WF DFD    G F+ GDVAWFL G+LNASV CID+H+  R D+TAILWE DEPG  R ITYK+L  E C++ANAM   GVRKGD V +Y+PM+PE++  MLAC RIGA HS+VFAGFSA+ALRDRI DA SKW+ T DEGKRGG+TLPLK  VD+A+ G   V++ F+F+RT    V +    D+ M ++M   RPYCPAE MDSED +FILYTSGSTGKPKGVAHTT GYL YAA T K  FD+QE DVYACVADCGWITGHSYIVYGPL NG TTV+FES P YP+  RYWDL+QR+ +T+FYTAPTAIRALM  G E +  ++RS+L+VLG+VGEPINPEAWKWY+E VGE +C IVDT+WQTETGGH+   LPG  PMK GSC LPFFG++ A++D   GKEL G   EG LC+K PWP + RTV+GDH RY +VY+ P+ G+YFTGDGARRDADGYYWITGR+DDVL+TSGHRIGTAEVESALV H+ V+EAAVVGFPH VKGEGICC++T+  GV  +  + KEL Q VR  IGAFATPD+I   PSLPKTRSGKIMRRILRKIA GE DS+GD+STLADP VV  +I
Sbjct:   23 AHIKGITQYKKEYQRSIEDPEGFWGEKAREALSWFHDFDVAHYGGFDNGDVAWFLGGKLNASVNCIDRHIVTRGDKTAILWESDEPGVHRRITYKDLLTETCKIANAMLTQGVRKGDTVAIYMPMIPELIMTMLACTRIGAIHSIVFAGFSADALRDRIIDAQSKWVFTADEGKRGGRTLPLKKTVDEAIHGVHVVKNVFVFKRTNNPKVPFHPKIDLDMTKIMPLMRPYCPAEWMDSEDYMFILYTSGSTGKPKGVAHTTGGYLTYAATTCKYTFDLQEDDVYACVADCGWITGHSYIVYGPLCNGATTVMFESTPMYPDCGRYWDLVQRYGITKFYTAPTAIRALMAHGKEFVKKYNRSTLKVLGTVGEPINPEAWKWYYEVVGEKKCMIVDTYWQTETGGHIGVGLPGAAPMKAGSCGLPFFGIDFAILDD-QGKELEG-VTEGRLCIKSPWPGLARTVYGDHHRYLSVYMAPHPGYYFTGDGARRDADGYYWITGRIDDVLSTSGHRIGTAEVESALVAHNVVTEAAVVGFPHRVKGEGICCYITLIHGVDGTNAVMKELTQQVRSIIGAFATPDIIVFVPSLPKTRSGKIMRRILRKIAHGEEDSIGDVSTLADPDVVPAII 647          
BLAST of NO01G04110 vs. NCBI_GenBank
Match: POM58064.1 (Acetate-CoA ligase [Phytophthora palmivora var. palmivora] >POM73335.1 Acetate-CoA ligase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 868.2 bits (2242), Expect = 1.600e-248
Identity = 406/628 (64.65%), Postives = 489/628 (77.87%), Query Frame = 0
Query:   23 APIHKLAQYKEMHRHSLDKPDEFWREQAHQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRT-GATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLIT 650
            A I    QY+ M++ SL+ P+ FW E A + L WF DFD+ + G+  +GDVAWFLNG++N SV CID+H+    D+ AI+WE DE G  R ITY EL +E CR+ANAMK  GV+KGD V +Y+PM+PEV F MLAC RIGA HSVVFAGFSA+ALRDR+ DA + W+ T+DEGKRGG+TLPLK IVD A++G   VR+ F+F+RT    V      D+ M+E M++ RPYC AE M++EDL+FILYTSGSTG PKG+AHTTAGYLLYA +T K VFD+Q  D+YACVAD GWITGHSYI+YGPL NG TTV+FES P YP+H RYWDLIQRHKVT+FYTAPTAIRALM  G + I  +D SSL++LGSVGEPINPEAWKWY+E VG  +C I DT+WQTETGGH+   LPG TPMKPGSCT PFFG++  + D   G E+ GND+EG LC+++PWP + RTV+G+H RY   Y+  +KG YFTGDG RRD DGYY+ITGR+DDVL TSGHRIGTAEVE+ LV H  V+EAAV+G PH +KGEGICCFVT+ +GV  S E+EKEL Q VR  IGAFA+PD+I   P LPKTRSGKIMRR+LRKI+ GE DSLGD+STLADPSVV  LIT
Sbjct:   23 AHIKNFEQYEAMYKRSLEDPENFWGELARENLDWFRDFDQSVVGTVNKGDVAWFLNGQINVSVNCIDRHVKKHADKVAIIWEADEVGQGREITYTELLEETCRVANAMKHAGVKKGDTVAIYMPMIPEVAFVMLACTRIGAVHSVVFAGFSADALRDRLIDAKTHWVFTSDEGKRGGRTLPLKQIVDVAVDGLDFVRNVFVFKRTHNPEVKLNPKIDIDMDEEMKRHRPYCAAEFMNAEDLMFILYTSGSTGAPKGIAHTTAGYLLYAMITCKYVFDLQHEDIYACVADAGWITGHSYIIYGPLANGVTTVMFESTPMYPDHGRYWDLIQRHKVTKFYTAPTAIRALMARGNDKIKEYDLSSLKILGSVGEPINPEAWKWYYEVVGNRQCYIADTYWQTETGGHIGVGLPGATPMKPGSCTKPFFGIDFVVTD-EHGTEIKGNDIEGQLCIRKPWPGMARTVYGNHNRYLLTYMATHKGLYFTGDGCRRDKDGYYFITGRIDDVLCTSGHRIGTAEVENTLVAHSVVAEAAVIGIPHRIKGEGICCFVTLVDGVKPSKEVEKELVQQVRAHIGAFASPDLIVLVPGLPKTRSGKIMRRVLRKISHGEEDSLGDVSTLADPSVVPILIT 649          
BLAST of NO01G04110 vs. NCBI_GenBank
Match: ETO81701.1 (acetate-CoA ligase [Phytophthora parasitica P1976])

HSP 1 Score: 867.1 bits (2239), Expect = 3.600e-248
Identity = 404/628 (64.33%), Postives = 490/628 (78.03%), Query Frame = 0
Query:   23 APIHKLAQYKEMHRHSLDKPDEFWREQAHQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALEGAPGVRHCFMFQRT-GATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLIT 650
            A I    QY+ M++ SL+ P+ FW E A + L WF DFD+ + G+  +GDVAWFLNG+LN SV CID+H+    D+ AI+WE DE G  R ITY EL +E CR+ANAMK  GV+KGD V +Y+PM+PE+ F MLAC RIGA HSVVFAGFSA+ALRDR+ DA++ W+ T+DEGKRGG+TLPLK IVD A++G   VR+ F+F+RT    V      DV M+E M++ RPYC AE M++EDL+FILYTSGSTG PKG+AHTTAGYLLYA +T K  FD+Q  D+YACVAD GWITGHSYI+YGPL NG TT++FES P YP+H RYWDLIQR+KVT+FYTAPTAIRALM  G + I  +D SSL++LGSVGEPINPEAWKWY+E VG  +C I DT+WQTETGGH+   LPG TPMKPGSCT PFFG++  + D  +G E+ GND+EG LC+++PWP + RTV+G+H RY   Y+  +KG YFTGDG RRD DGYY+ITGR+DDVL TSGHRIGTAEVE+ LV H  V+EAAV+G PH +KGEGICCFVT+ EGV  S E+EKEL Q VR  IGAFA+PD++   P LPKTRSGKIMRR+LRKI+ GE DSLGD+STLADPSVV  LIT
Sbjct:   23 AHIKNFEQYEAMYKRSLEDPENFWGELARENLDWFRDFDQSVVGTVNKGDVAWFLNGQLNVSVNCIDRHVKKHADKVAIIWEADEIGQGREITYTELLEETCRVANAMKHAGVKKGDTVAIYMPMIPEIAFVMLACTRIGAVHSVVFAGFSADALRDRLIDANTHWVFTSDEGKRGGRTLPLKQIVDVAVDGLDFVRNVFVFKRTHNPEVKMNPKIDVDMDEEMKRHRPYCAAEFMNAEDLMFILYTSGSTGAPKGIAHTTAGYLLYAMITCKYTFDLQPDDIYACVADAGWITGHSYIIYGPLANGVTTLMFESTPMYPDHGRYWDLIQRYKVTKFYTAPTAIRALMARGNDKIKEYDLSSLKILGSVGEPINPEAWKWYYEVVGNRQCYIADTYWQTETGGHIGVGLPGATPMKPGSCTKPFFGIDFVVTD-ENGNEIKGNDIEGQLCIRKPWPGMARTVYGNHNRYLLTYMSTHKGLYFTGDGCRRDKDGYYFITGRIDDVLCTSGHRIGTAEVENTLVAHSVVAEAAVIGIPHRIKGEGICCFVTLVEGVKPSKEVEKELVQQVRAHIGAFASPDLVVLVPGLPKTRSGKIMRRVLRKISHGEEDSLGDVSTLADPSVVPILIT 649          
The following BLAST results are available for this feature:
BLAST of NO01G04110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29348.10.000e+087.69acetyl-coenzyme a synthetase [Nannochloropsis gadi... [more]
XP_005854118.10.000e+090.05acyl-CoA synthetase [Nannochloropsis gaditana CCMP... [more]
CBN79823.12.200e-26169.52Acetyl-coenzyme A synthetase [Ectocarpus siliculos... [more]
OQR98792.17.900e-25666.99acetyl-coenzyme A synthetase [Achlya hypogyna][more]
XP_008607286.11.500e-25466.99acetyl-CoA synthetase [Saprolegnia diclina VS20] >... [more]
XP_012193951.11.500e-25466.99acetate-CoA ligase [Saprolegnia parasitica CBS 223... [more]
XP_009518711.17.700e-25165.24acetyl-CoA synthetase [Phytophthora sojae] >EGZ234... [more]
OQS00047.16.500e-25066.03acetyl-coenzyme A synthetase [Thraustotheca clavat... [more]
POM58064.11.600e-24864.65Acetate-CoA ligase [Phytophthora palmivora var. pa... [more]
ETO81701.13.600e-24864.33acetate-CoA ligase [Phytophthora parasitica P1976][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007877NSK007877Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04110.3NO01G04110.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G04110.2NO01G04110.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G04110.1NO01G04110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577289gene_426Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100028g54gene1285Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04110.3NO01G04110.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G04110.2NO01G04110.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G04110.1NO01G04110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04110 ID=NO01G04110|Name=NO01G04110|organism=Nannochloropsis oceanica|type=gene|length=2377bp
ACACTCCTACAGCTTCCACCTGCTTGCTGGGTTCGGCTGCACCCGCCTGC
CCTCCTTTCCCCCGATAAGCCATGGCGCAGATGCTGTCCCCACGGCCAGG
CGTAGAGTTGCAGGAGCACACTACCTTCAAGCCTATCGCACCCATCCACA
AATTGGCGCAGTACAAGgtactttgggtggtgcttgtaggggactcgtta
tcgcggatcgcggctgaccgtgccctctttccttcacatacccccacacg
acaaaaccagGAGATGCACCGGCACAGTCTTGACAAACCCGACGAGTTCT
GGCGGGAACAGGCTCACCAGTACCTCCAGGTAAGTAGAGACACTCCTTAT
TTGATGTGTGGGCTTGCAGGGTATGTGATCGCTTGTAAGAGTGAGTAGTC
GTGCGCAAGCTGAGAGAGTCGCCTCCGCGAAGGTTTATAAAGTTCAGTGA
ATATTATTAGTTAAAATCTACAGGATGTGGGGAAAAAAAGAACGTGGGGG
CGGGTATTGACACACTTAATCGCCCTCAGTCCCTCCCTCCCATTTTCGTC
CAACCTCACAAATAGTGGTTTTCCGATTTTGACCGCGTCATGCAAGGTTC
CTTCGAAGAAGGCGACGTGGCGTGGTTCCTGAACGGAAGGCTCAATGCAT
CTGTTTGCTGTATTGATCAGCACTTGCCTCACCGTCAGGATCAGACGGCA
ATTCTGTGGGAGGGGGACGAACCGGGAGATAGTCGGGCGATAACATACAA
GGAGCTCTACCAGGAAGTGTGTCGCTTGGCTAATGCCATGAAGGCCTTGG
GAGTGCGAAAAGGAGATGTGGTCATGTTGTATTTGCCCATGGTCCCGGAG
GTGGTGTTTGCCATGCTGGCGTGTGCGAGGATTGGGGCGCCGCATTCGGT
TGTTTTCGCGGGTTTCTCGGCGGAGGCTCTGAGGGATCGGATTAATGATG
CGCATAGTAAGTGGATCATGACGACGGACGAAGGGAAGAGGGGGGGAAAG
ACCTTGCCATTGAAGTCGATCGTGGACAAGGCGTTGGAGGGGGCGCCGGG
CGTGAGGCATTGCTTCATGTTTCAACGGACGGGGGCCACGGTCGGGTGGG
TGGACGGGAGGGATGTGAAGATGGAGGAGGTGATGAGGCAGCAACGGCCT
TATTGTCCGGCAGAGCCTATGGACAGTGAGGATCTGCTCTTTATTTTGTA
TACGAGCGGGTCGACGGGAAAGCCCAAGGGCGTGGCGCACACCACGGCGG
GGTATTTGCTTTATGCGGCTATGACGCATAAAACAGTGTTTGATATCCAG
GAGGGGGACGTGTATGCGTGCGTGGCGGACTGCGGGTGGATCACGGGGCA
TTCGTACATCGTGTATGGGCCACTTGTGAATGGCACGACGACGGTGTTGT
TTGAGAGCATCCCAACGTACCCGAACCACTGCCGTTACTGGGACTTGATC
CAACGGCACAAGGTCACACAGTTCTACACTGCTCCGACGGCTATACGTGC
GTTAATGCGCTTCGGAACCGAGGACATTGCGAGTTTCGATCGCTCCTCCC
TGCGGGTCCTGGGGAGTGTGGGCGAACCCATCAATCCGGAGGCTTGGAAG
TGGTATTTTGAACATGTCGGGGAATCGCGGTGCACGATTGTCGATACGTG
GTGGCAGACTGAAACGGGCGGGCATCTGGCTAGTCCCTTGCCGGGTGTCA
CGCCCATGAAACCAGGTTCGTGTACGTTGCCTTTTTTTGGGGTGGAGCTC
GCCTTGGTAGACCCGGCGTCGGGGAAGGAGCTGTTGGGGAATGACGTGGA
AGGGGTATTGTGCGTCAAGAGGCCTTGGCCGTCGGTGACGAGGACGGTCT
TTGGCGACCATGAGAGGTATTTTACTGTGTATCTGAAGCCGTACAAAGGC
TTTTATTTCACGGGGGATGGCGCCAGGAGGGACGCGGATGGGTATTACTG
GATTACGGGACGAGTGGACGATGTGCTTAATACGTCGGGGCACAGGATTG
GCACTGCGGAGGTGGAGAGTGCGTTGGTGGGTCACCACGCCGTGTCGGAG
GCGGCTGTGGTGGGCTTTCCACACCCGGTGAAGGGGGAGGGGATTTGTTG
CTTCGTGACAATGAGGGAGGGGGTGATGGAGAGCCCGGAGTTGGAGAAGG
AATTGAAGCAGGCGGTGCGGGATGCAATTGGGGCATTTGCCACCCCGGAT
GTAATTTGCGGAACACCGTCTCTGCCCAAGACACGGAGTGGAAAGATCAT
GAGGAGGATTTTGAGGAAGATTGCGAGCGGGGAGAGTGATAGTTTGGGGG
ACATTTCGACCTTGGCCGACCCGAGTGTGGTGACTTACTTGATCACCGCG
ATTGCGTTAAAGGTGAAGAGGGCGTAG
back to top

protein sequence of NO01G04110.3

>NO01G04110.3-protein ID=NO01G04110.3-protein|Name=NO01G04110.3|organism=Nannochloropsis oceanica|type=polypeptide|length=596bp
MQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRA
ITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGA
PHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALE
GAPGVRHCFMFQRTGATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLL
FILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGW
ITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPT
AIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTI
VDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLG
NDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDAD
GYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGE
GICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRS
GKIMRRILRKIASGESDSLGDISTLADPSVVTYLITAIALKVKRA*
back to top

protein sequence of NO01G04110.2

>NO01G04110.2-protein ID=NO01G04110.2-protein|Name=NO01G04110.2|organism=Nannochloropsis oceanica|type=polypeptide|length=659bp
MAQMLSPRPGVELQEHTTFKPIAPIHKLAQYKEMHRHSLDKPDEFWREQA
HQYLQWFSDFDRVMQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTA
ILWEGDEPGDSRAITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPE
VVFAMLACARIGAPHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGK
TLPLKSIVDKALEGAPGVRHCFMFQRTGATVGWVDGRDVKMEEVMRQQRP
YCPAEPMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQ
EGDVYACVADCGWITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLI
QRHKVTQFYTAPTAIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWK
WYFEHVGESRCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVEL
ALVDPASGKELLGNDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKG
FYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSE
AAVVGFPHPVKGEGICCFVTMREGVMESPELEKELKQAVRDAIGAFATPD
VICGTPSLPKTRSGKIMRRILRKIASGESDSLGDISTLADPSVVTYLITA
IALKVKRA*
back to top

protein sequence of NO01G04110.1

>NO01G04110.1-protein ID=NO01G04110.1-protein|Name=NO01G04110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=596bp
MQGSFEEGDVAWFLNGRLNASVCCIDQHLPHRQDQTAILWEGDEPGDSRA
ITYKELYQEVCRLANAMKALGVRKGDVVMLYLPMVPEVVFAMLACARIGA
PHSVVFAGFSAEALRDRINDAHSKWIMTTDEGKRGGKTLPLKSIVDKALE
GAPGVRHCFMFQRTGATVGWVDGRDVKMEEVMRQQRPYCPAEPMDSEDLL
FILYTSGSTGKPKGVAHTTAGYLLYAAMTHKTVFDIQEGDVYACVADCGW
ITGHSYIVYGPLVNGTTTVLFESIPTYPNHCRYWDLIQRHKVTQFYTAPT
AIRALMRFGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGESRCTI
VDTWWQTETGGHLASPLPGVTPMKPGSCTLPFFGVELALVDPASGKELLG
NDVEGVLCVKRPWPSVTRTVFGDHERYFTVYLKPYKGFYFTGDGARRDAD
GYYWITGRVDDVLNTSGHRIGTAEVESALVGHHAVSEAAVVGFPHPVKGE
GICCFVTMREGVMESPELEKELKQAVRDAIGAFATPDVICGTPSLPKTRS
GKIMRRILRKIASGESDSLGDISTLADPSVVTYLITAIALKVKRA*
back to top
Synonyms
Publications