NO01G04050, NO01G04050 (gene) Nannochloropsis oceanica

Overview
NameNO01G04050
Unique NameNO01G04050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2634
Alignment locationchr1:1081937..1084570 +

Link to JBrowse

Properties
Property NameValue
DescriptionCellulase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1081937..1084570 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
GO:0016787hydrolase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0008152metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001547Glyco_hydro_5
Homology
BLAST of NO01G04050 vs. NCBI_GenBank
Match: WP_030838129.1 (1,4-beta-glucanase [Streptomyces hygroscopicus])

HSP 1 Score: 181.0 bits (458), Expect = 1.000e-41
Identity = 106/345 (30.72%), Postives = 173/345 (50.14%), Query Frame = 0
Query:  226 ANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIPVSTTMALDMDGAPRKAP--DDADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAWVCLLNKV---PRVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSERVVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFGDSNESAKG--RIWSNCIVDYLTQTGLTNAFYS-------SGSVMGGDFKSPDTQRLENLQRLQ 557
            A+G+   L GVNW G ETE    +GL + +  + LD +A  GFN +++P S  M       P       + DL GL+   ++ K+V+ A  RG+  +L+  R D+   + +LWY    S +     WV L  +     RV+G ++   P G A WGD NP  DW  AA +  N I  +    + L  VEG     +           W+GG+LQGV KHP++L+     +VVY+   +GP  +NQ +F   DFP+ M  +W  H+ ++K    + V++ EFG    + K    +W N ++DYL +  ++  +++       +G V+  D+K+ D  +++ L + Q
Sbjct:   85 ADGKKVVLTGVNWFGFETETFAPHGLWTRSWESMLDQMAKQGFNTLRLPYSNEM-FKSSSKPNGIDFHKNPDLKGLTPQQIMDKIVKGATDRGMRVILDQHRPDQYSQS-ELWYSQNLSEKQWLDDWVKLAKRYQNNDRVIGADLHNEPRGQATWGDGNPKTDWQLAATKAGNAI--HKVNKNWLIFVEGTDRFKDEQ--------FWWGGDLQGVKKHPVKLK--EPNKVVYSAHDYGPGVYNQNWFMAKDFPKNMPAIWEKHWAYIKKQNIAPVLLGEFGGKKTAGKSSEAVWQNALMDYLKKNQISYTYWTWNPDSGDTGGVLKNDWKTIDKNKMKMLSKYQ 415          
BLAST of NO01G04050 vs. NCBI_GenBank
Match: XP_012752413.1 (hypothetical protein SAMD00019534_079190 [Acytostelium subglobosum LB1] >GAM24744.1 hypothetical protein SAMD00019534_079190 [Acytostelium subglobosum LB1])

HSP 1 Score: 181.0 bits (458), Expect = 1.000e-41
Identity = 121/385 (31.43%), Postives = 190/385 (49.35%), Query Frame = 0
Query:  204 TVSGSPSGAAAIAWKSTDGQLLANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIPVSTTMALDMDGAPR--KAPD---DADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWY--------DGR---HSVEDVQTAWVCLLNKVPR---VMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSERVVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFGDSNESAKGRIWSNCIVDYLTQTGLTNAFYSS--------GSVMGGDFKSPDTQRLENLQRLQENPTK 562
            +V+     +++I + ++  QL  NGQT  ++G+ W GLET      GL ST+  A LD+L +  FN ++IP S  M L     PR   A D   + +LAG +   V+  + +    RGI  V+E+ R D      +LWY        DG+   ++ + V   W+ + N++ +      V++K  PHG A WG  N + DWN A   IAN  I +   ++G++ +EG++N  N  +        W+GGNL      P+ L      +VV+    +  S  +Q YFN  ++P  M  VW   FGFL+  + S +VV E+G + ++ K   W N   +YL  TG TN  Y S         S++G D+K+ ++     L  +  NPTK
Sbjct:    7 SVTSQCYSSSSIKYATSGKQLTVNGQTMAVQGIAWFGLETNTFSPGGLRSTSVEALLDILVAQKFNVLRIPFSVDMIL----KPRMPTAIDYNLNPNLAGKTGFQVIEYITKACGDRGILVVMELHRFDPNDYISELWYTTSCLNNIDGQCINYTTQMVIDTWITVTNQLKKYWNFWAVDVKNEPHGAATWGTGNTNTDWNTAFINIAN-SIQSATSFNGVYFIEGIEN--NAGSLCSPSSGNWWGGNLSPQQCFPVFLA--TPNKVVFTPHTYCSSVSDQPYFNDANYPNNMPAVWDASFGFLR-NRNSPMVVGEWGCATKNNKNVQWVNAFTNYLKSTGQTNHIYFSLNPDSADTDSILGLDWKTVNSNVASYLSNIGTNPTK 381          
BLAST of NO01G04050 vs. NCBI_GenBank
Match: EWM23139.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 181.0 bits (458), Expect = 1.000e-41
Identity = 108/360 (30.00%), Postives = 175/360 (48.61%), Query Frame = 0
Query:  217 WKSTDGQLLANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIPVSTT-MALDMDGAPRKA-PDDADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAWVCLLNKVP---RVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRL-QGDGSERVVYATRAFGPSAF-NQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFGDS-NESAKGRIWSNCIVDYLTQTGLTNAFY--------SSGSVMGGDFKSPDTQRLENLQRLQENPT 561
            + S +G ++ NG    LKG+NW G E E  +L+GL   +   ++  LAS+ FN +++P S   +A  +D           D+ GL+ G V+ ++ + A  +GI  +L++  I   +   DLWYD       V   W  LL +      ++G+++K  PHG A WG  +P  DWN  A +    +   VP +HG+F VEG++          +    W+GGNL+GV K+PI     D   RVVY+   +GP  F    YF    FP  M  +W   FG+++ + G AVV+ E+G S     K       + ++L    + + F+         +G ++  D+++ D   L+ L  +Q  PT
Sbjct:  177 YTSENGSVMLNGNPLYLKGLNWYGFEGELFVLDGLAVWSPERFMSFLASHRFNALRLPFSLEWLARGLDSPLANIYVVQEDMRGLTQGQVMDRIFDAAAAQGILILLDLHVISVEKGITDLWYDETADGALVLDLWTLLLRRFAGRWNLLGIDLKNEPHGIASWGHGHPKTDWNAFATKSIQTLATRVPDFHGVFFVEGIER-----PRWNSPHAYWWGGNLEGVRKYPISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWIEKSTGRAVVLGEWGGSIVGDRKAAANQQKLAEWLVHACIPDNFWWCLNPATEFNGGLLARDYQAVDKNVLQMLHYVQPKPT 531          
BLAST of NO01G04050 vs. NCBI_GenBank
Match: WP_060942803.1 (1,4-beta-glucanase [Streptomyces hygroscopicus])

HSP 1 Score: 181.0 bits (458), Expect = 1.000e-41
Identity = 106/345 (30.72%), Postives = 173/345 (50.14%), Query Frame = 0
Query:  226 ANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIPVSTTMALDMDGAPRKAP--DDADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAWVCLLNKV---PRVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSERVVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFGDSNESAKG--RIWSNCIVDYLTQTGLTNAFYS-------SGSVMGGDFKSPDTQRLENLQRLQ 557
            A+G+   L GVNW G ETE    +GL + +  + LD +A  GFN +++P S  M       P       + DL GL+   ++ K+V+ A  RG+  +L+  R D+   + +LWY    S +     WV L  +     RV+G ++   P G A WGD NP  DW  AA +  N I  +    + L  VEG     +           W+GG+LQGV KHP++L+     +VVY+   +GP  +NQ +F   DFP+ M  +W  H+ ++K    + V++ EFG    + K    +W N ++DYL +  ++  +++       +G V+  D+K+ D  +++ L + Q
Sbjct:   85 ADGKKVVLTGVNWFGFETETFAPHGLWTRSWESMLDQMAKQGFNTLRLPYSNEM-FKSSSKPNGIDFHKNPDLKGLTPQQIMDKIVKGATDRGMRVILDQHRPDQYSQS-ELWYSQNLSEKQWLDDWVKLAKRYQNNDRVIGADLHNEPRGQATWGDGNPKTDWQLAATKAGNAI--HKVNKNWLIFVEGTDRFKDEQ--------FWWGGDLQGVKKHPVKLK--EPNKVVYSAHDYGPGVYNQNWFMAKDFPKNMPAIWEKHWAYIKKQNIAPVLLGEFGGKKTAGKSSEAVWQNALMDYLKKNQISYTYWTWNPDSGDTGGVLKNDWKTIDKNKMKMLSKYQ 415          
BLAST of NO01G04050 vs. NCBI_GenBank
Match: WP_065961431.1 (1,4-beta-glucanase [Streptomyces sparsogenes] >OMI38490.1 glycoside hydrolase [Streptomyces sparsogenes DSM 40356])

HSP 1 Score: 179.1 bits (453), Expect = 3.800e-41
Identity = 107/349 (30.66%), Postives = 176/349 (50.43%), Query Frame = 0
Query:  226 ANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIPVSTTMALDMDGAPRKAPD------DADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAWVCLLNKV---PRVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSERVVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFGDSNESAKG--RIWSNCIVDYLTQTGLTNAFYS-------SGSVMGGDFKSPDTQRLENLQRLQ 557
            + G    L G+NW G+ET +   +GL +    + LD +A  GFN I++P S  +      A +  P+      + DL GL+   ++ K+V+ A  RG+  +L+  R D+   + +LWY    + +     W  L  +    PRV+G ++   P G A WGD NP  DW  AAE+  N I  +    + L  VEG         D       W+GG+LQGV K+P++L+   S +VVY+   +GP  +NQ +F   DFP+ M  +W  H+ ++K    + V++ EFG    + K    +W N ++DYL +  ++  ++S       +G V+  D+KS D  +++ L + Q
Sbjct:   86 SKGHKVVLTGINWFGMETGSFAPHGLWARNWKSMLDQIAHNGFNTIRLPYSNEIF-----AAKSKPNGIDYKQNPDLKGLTGQQIMDKIVKGATDRGMMVILDQHRPDQYGQS-ELWYSQNLTEKQWLDDWKQLAKRYKDNPRVIGADLHNEPRGQATWGDGNPKTDWRLAAEKAGNAI--HSVNKNWLIFVEG--------TDRHGDEQFWWGGDLQGVKKYPVKLK--ESNKVVYSAHDYGPGVYNQNWFMAKDFPKNMPAIWKKHWAYIKQDNIAPVLLGEFGGRKTAGKSSEAVWQNALMDYLKKNQISYTYWSLNPNSGDTGGVLKNDWKSVDKNKMKMLSKYQ 416          
BLAST of NO01G04050 vs. NCBI_GenBank
Match: WP_015184298.1 (endoglucanase [Microcoleus sp. PCC 7113] >AFZ20162.1 endoglucanase [Microcoleus sp. PCC 7113])

HSP 1 Score: 178.7 bits (452), Expect = 5.000e-41
Identity = 109/353 (30.88%), Postives = 182/353 (51.56%), Query Frame = 0
Query:  219 STDGQLL--ANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIP--VSTTMALDMDGAPRKAPDDADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAWVCLLNK---VPRVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSERVVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFG--DSNESAKGRIWSNCIVDYLTQTGLTNAFYS-------SGSVMGGDFKSPDTQRLENLQRL 556
            ST G  +  A+G++  L+GVNW G+ETE    +GL S      L  + S G+N I++P  V +  + ++ G   +   + +L G S  +V+  V++ + + G+  +L+  R+++ Q  P+LWY    +  D    W  L  +    P ++G ++K  PHG A WG +N   DW  AAE+  N I+A  P +  L +VEGV+     +   + +   W G NL+GV K P+RL    S ++VY+   +G   +NQ +FN   FP  +   W   + ++ T   + ++V EFG    + S+K  IW    VDY+ Q  L+ A++S       +G ++  D++S    + E LQ L
Sbjct:   43 STQGSKIVDASGKSVLLRGVNWFGIETELHAPDGLSSRDYKDMLAQIKSLGYNLIRLPYSVQSLRSQNVQGINYQLGSNQELQGKSPLEVMDAVIQESNRLGLLVLLDSHRLND-QRIPELWYGDGFTETDWIDTWKMLATRYKNYPNIIGADLKNEPHGRASWGTNNSETDWRLAAERAGNAILAINPNW--LIVVEGVEK----NVPGQKLAAHWMGANLEGVEKFPVRL--SKSNKLVYSPHEYGAGVYNQPWFNEPSFPNNLESRWETGWNYIATKGIAPILVGEFGGRQVDTSSKEGIWQRKFVDYIRQKDLSFAYWSWNPNSADTGGILQDDWQSVQAAKQELLQGL 386          
BLAST of NO01G04050 vs. NCBI_GenBank
Match: WP_078642203.1 (1,4-beta-glucanase [Streptomyces hygroscopicus] >AQW51743.1 endo-1,4-beta-glucanase [Streptomyces hygroscopicus])

HSP 1 Score: 178.3 bits (451), Expect = 6.500e-41
Identity = 106/345 (30.72%), Postives = 171/345 (49.57%), Query Frame = 0
Query:  226 ANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIPVSTTMALDMDGAPRKAP--DDADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAWVCLLNKV---PRVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSERVVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFGDSNESAKG--RIWSNCIVDYLTQTGLTNAFYS-------SGSVMGGDFKSPDTQRLENLQRLQ 557
            ANG+   L GVNW G ET     +GL +    + LD +A  GFN +++P +  M       P       + DL GL+   ++ K+V+ A  RGI  +L+  R D+   + +LWY    S +     WV L  +     RV+G ++   P G A WGD NP  DW  AA +  N I  +    + L  VEG     N           W+GG+LQGV KHP++L+     +VVY+   +GP  +NQ +F   DFP+ M  +W  H+ ++K    + +++ EFG    + K    +W N ++DYL +  ++  +++       +G V+  D+K+ D  +++ L + Q
Sbjct:   84 ANGKKVVLTGVNWFGFETGTYAPHGLWTRNWESMLDQMAKQGFNTMRLPYANEM-FKSSAKPNGIDWHKNPDLKGLTPQQIMDKIVKGATDRGIRVILDQHRPDQYGQS-ELWYSQSLSEKQWMDDWVKLAKRYKNNDRVIGADLHNEPRGQATWGDGNPKTDWQLAATKAGNAI--HKVNKNWLIFVEGTDRHKNEQ--------FWWGGDLQGVKKHPVKLK--EPNKVVYSAHDYGPGVYNQNWFMAKDFPKNMPAIWEKHWAYIKKQNIAPLLLGEFGGKKTAGKSSEAVWQNALMDYLKKHQISYTYWTWNPDSGDTGGVLKNDWKTIDQNKMKMLAKYQ 414          
BLAST of NO01G04050 vs. NCBI_GenBank
Match: EWM26661.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 177.9 bits (450), Expect = 8.500e-41
Identity = 110/365 (30.14%), Postives = 179/365 (49.04%), Query Frame = 0
Query:  215 IAWKS-TDGQLLANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIPVSTTMAL-DMDGAPRKAPDDADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAWVCLLNKVP---RVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQ-GDGSERVVYATRAFGPSAFNQEYFN--RGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFGDSNESAKGR--IWSNCIVDYLTQTGLTNAFY--------SSGSVMGGDFKSPDTQRLENLQRLQENPTK 562
            +AW S  DGQ+ AN   F +KG++W G E       GL+ TT    L+    + FN ++IPVS    L   D  P +      L G +  ++L +V++ A  RG+  +L+M  +   + T DLWYD ++   D+  AW  ++        V  +++K  PHG A WG S P  D+NK  E+    I    P + GL++VEGVQ   N + D  T +P W+GGN  G  +HPI +   +   RVVY+   +GP  ++  Y N    +    + +VW    G+L       +++ E+G    S KGR  I    +  +L +  + N  +         +G +M  ++K+ D +RL+ +  +  +PT+
Sbjct:   75 LAWSSGKDGQIYANTAPFFVKGISWFGCEGHGYTFTGLNFTTVDTILNFFLQHKFNTVRIPVSVAFGLAPKDFKPNQRFVGKGLKGKTIWEILDEVIDQAALRGLMVMLDMHTLGPQEAT-DLWYDEQYKEADILQAWSNIMAAYSIKWNVFALDLKNEPHGIATWGVSAPQTDYNKFYERAIAHIHTQFPNWKGLYMVEGVQ--YNKETDKVTDYPFWWGGNFGGAIQHPIYVPVPEVMNRVVYSPHVYGPDVYDHPYMNVPAAELANELVKVWDSQMGWLIPKLQKGMIIGEWGG---SLKGRDEIVQTELAKWLVKNCMANNVWWAINPESSDTGGIMAWNWKTYDKRRLDLVDSIFPDPTQ 433          
BLAST of NO01G04050 vs. NCBI_GenBank
Match: ADI09009.1 (glycoside hydrolase family protein [Streptomyces bingchenggensis BCW-1])

HSP 1 Score: 177.6 bits (449), Expect = 1.100e-40
Identity = 111/366 (30.33%), Postives = 182/366 (49.73%), Query Frame = 0
Query:  211 GAAAIAWKSTDGQLL--ANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIPVSTTMALDMDGAPRKAPD------DADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAWVCLLNKV---PRVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSERVVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFGDSNESAKG--RIWSNCIVDYLTQTGLTNAFYS-------SGSVMGGDFKSPDTQRLENLQRLQ 557
            GAA     ST G  +  + G    L GVNW G+ET +   +GL +    + LD +A  GFN I++P S  M      A +  P+      + DL GL+   ++ K+V+ A  RG+  +L+  R D+   + +LWY    + +     W  L  +    PRV+G ++   P G A WGD NP  DW  AAE+  N I  +    + L  VEG     N           W+GG+LQGV K+P++L+     +VVY+   +GP  +NQ +F   DFP+ M  +W  H+ ++K    + +++ EFG    + K    +W N ++DYL +  ++  +++       +G V+  D+K+ D  +++ L + Q
Sbjct:   65 GAAVDGPLSTRGGDIVDSKGHKVVLTGVNWFGMETGSFAPHGLWTRNWKSMLDQIAHNGFNTIRLPYSNEMF-----AAKSKPNGIDFKQNPDLKGLTGQQIMDKIVKGATDRGMMVLLDQHRPDQYGQS-ELWYSQNLTEKQWVDDWTQLAKRYKDNPRVIGADLHNEPRGQATWGDGNPKTDWRLAAEKAGNAI--HAVNKNWLIFVEGTDRHKNEQ--------FWWGGDLQGVKKYPVKLK--EPNKVVYSAHDYGPGVYNQNWFMAKDFPKNMPAIWQKHWAYIKKQNIAPLLLGEFGGRKTAGKSSEAVWQNALMDYLKKNQISYTYWALNPNSGDTGGVLNNDWKTVDKNKMKMLSKYQ 412          
BLAST of NO01G04050 vs. NCBI_GenBank
Match: WP_106436405.1 (MULTISPECIES: 1,4-beta-glucanase [Streptomyces])

HSP 1 Score: 177.6 bits (449), Expect = 1.100e-40
Identity = 111/366 (30.33%), Postives = 182/366 (49.73%), Query Frame = 0
Query:  211 GAAAIAWKSTDGQLL--ANGQTFRLKGVNWTGLETEARMLNGLDSTTGAAYLDLLASYGFNGIKIPVSTTMALDMDGAPRKAPD------DADLAGLSAGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAWVCLLNKV---PRVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVPGYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSERVVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSEFGDSNESAKG--RIWSNCIVDYLTQTGLTNAFYS-------SGSVMGGDFKSPDTQRLENLQRLQ 557
            GAA     ST G  +  + G    L GVNW G+ET +   +GL +    + LD +A  GFN I++P S  M      A +  P+      + DL GL+   ++ K+V+ A  RG+  +L+  R D+   + +LWY    + +     W  L  +    PRV+G ++   P G A WGD NP  DW  AAE+  N I  +    + L  VEG     N           W+GG+LQGV K+P++L+     +VVY+   +GP  +NQ +F   DFP+ M  +W  H+ ++K    + +++ EFG    + K    +W N ++DYL +  ++  +++       +G V+  D+K+ D  +++ L + Q
Sbjct:   69 GAAVDGPLSTRGGDIVDSKGHKVVLTGVNWFGMETGSFAPHGLWTRNWKSMLDQIAHNGFNTIRLPYSNEMF-----AAKSKPNGIDFKQNPDLKGLTGQQIMDKIVKGATDRGMMVLLDQHRPDQYGQS-ELWYSQNLTEKQWVDDWTQLAKRYKDNPRVIGADLHNEPRGQATWGDGNPKTDWRLAAEKAGNAI--HAVNKNWLIFVEGTDRHKNEQ--------FWWGGDLQGVKKYPVKLK--EPNKVVYSAHDYGPGVYNQNWFMAKDFPKNMPAIWQKHWAYIKKQNIAPLLLGEFGGRKTAGKSSEAVWQNALMDYLKKNQISYTYWALNPNSGDTGGVLNNDWKTVDKNKMKMLSKYQ 416          
The following BLAST results are available for this feature:
BLAST of NO01G04050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_030838129.11.000e-4130.721,4-beta-glucanase [Streptomyces hygroscopicus][more]
XP_012752413.11.000e-4131.43hypothetical protein SAMD00019534_079190 [Acytoste... [more]
EWM23139.11.000e-4130.00cellulase 2 [Nannochloropsis gaditana][more]
WP_060942803.11.000e-4130.721,4-beta-glucanase [Streptomyces hygroscopicus][more]
WP_065961431.13.800e-4130.661,4-beta-glucanase [Streptomyces sparsogenes] >OMI... [more]
WP_015184298.15.000e-4130.88endoglucanase [Microcoleus sp. PCC 7113] >AFZ20162... [more]
WP_078642203.16.500e-4130.721,4-beta-glucanase [Streptomyces hygroscopicus] >A... [more]
EWM26661.18.500e-4130.14cellulase 2 [Nannochloropsis gaditana][more]
ADI09009.11.100e-4030.33glycoside hydrolase family protein [Streptomyces b... [more]
WP_106436405.11.100e-4030.33MULTISPECIES: 1,4-beta-glucanase [Streptomyces][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04050.1NO01G04050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537539gene_418Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04050.1NO01G04050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04050 ID=NO01G04050|Name=NO01G04050|organism=Nannochloropsis oceanica|type=gene|length=2634bp
ACCACAGCATTTAAATTAGCCACTACATCTCTCGAACGACCATGGTTCTT
AAGGTTATTTCCGCCACTTACGGCCACCCCGAGGACGCCACCAAGTCCCT
GGATGTGACAGCGCAGCTTGCCGGCGCCATCATCGACACCAACGCCGGGG
GCAAGCTCCGCGTGGATGTGAACGCCAAAACATTCGGTAACATTGATCCT
GCGGAGGGTGTGGTTAAGGTTTTAAAAGTCACCTACTCTGTCGCGGAGGG
CGGGGCTGTAGAAGAGGTGGTGACGGAGGAGGGCGCTGCCTTGGAGCTGG
CTGGCAAGGCGCCTCCCCAGGGGACGTTGATGATTCTTGAGGCCAAGTAC
GGCGTGTTGGATGATGCGGAGAAATGTATTGATGTCACAGCGCTGGTGCG
TGATGCGGCCGCGGCCGAAAACAACGAGAAAGTAGCAGTCAAGGTCGATA
ATAACACGATGAAGAGGGACCCGGCTCCCCAAAAGCCCAAGCAGCTCAAG
ATATTTTACCAGGACGGGCCTAGTGGCCCAGTGCGGGAGGTGCTGAGGAA
CGAGGGGGAGACCGCAAGCTTTGCTATGGGTGAGACCACCGCTCCTGTAC
ATGCAGATAAATCTTCGGAAGTAGCGGCTCACGAGGCAGCGACAGGCACC
ACCGTGTCAGGCTCCCCTTCGGGCGCGGCTGCGATCGCCTGGAAGTCGAC
TGATGGGCAACTGTTGGCCAATGGTCAGACATTTCGCTTGAAGGGGGTGA
ACTGGACGGGGCTCGAAACGGAAGCACGCATGTTAAACGGTCTTGACTCA
ACAACGGGGGCGGCTTATCTTGACCTGTTGGCAAGCTACGGGTTTAATGG
GATCAAGATTCCAGTCTCGACCACTATGGCGTTGGACATGGACGGGGCGC
CTCGCAAGGCGCCGGATGATGCGGATCTTGCGGGGCTGTCGGCGGGAGAC
GTACTGGCCAAGGTGGTGGAGATGGCGCGTCAACGTGGGATTCACACGGT
GTTGGAGATGGGGAGGATTGACGAGACCCAGCCGACGCCTGATTTGTGGT
ATGATGGCCGGCATTCGGTGGAAGACGTGCAGACTGCCTGGGTCTGCCTC
TTGAATAAGGTCCCGAGGGTGATGGGTGTGAATATTAAGGGGTCTCCGCA
TGGGTGTGCTTGCTGGGGGGATTCGAACCCGAGCCAGGATTGGAATAAAG
CGGCGGAGCAGATTGCAAATTTTATCATCGCTAATGTGCCTGGGTATCAC
GGGCTGTTTTTGGTAGAGGGCGTTCAAAATGTGGCGAATGTGGATGCAGA
CAATAAAACTATTTTTCCTGCGTGGTATGGTGGGAATTTGCAGGGAGTGA
CGAAGCACCCGATTCGGCTGCAGGGGGATGGGAGTGAAAGGGTGGTATAT
GCCACACGGGCGTTTGGGCCCTCGGCGTTTAATCAAGAGTATTTTAACCG
AGGGGACTTCCCGCAATGCATGTGGCAGGTCTGGAGCGATCATTTTGGGT
TTTTGAAGACGACTCAGGGGTCGGCCGTGGTGGTGAGTGAGTTCGGGGAT
AGCAATGAGAGCGCGAAGGGGCGAATCTGGTCGAATTGCATAGTAGATTA
CCTTACCCAGACCGGCTTGACGAACGCTTTCTATTCGTCAGGGAGTGTGA
TGGGAGGGGATTTTAAGAGTCCTGATACCCAGCGGTTAGAGAATTTACAG
CGGCTGCAGGAGAACCCGACCAAGCTGTAAAGCGGCAGCAGAGAGAGGGG
ATGGGAGGAGGACGAGAGAGTCAAGGCGAGATGAAACTTGTCATTTTCTT
CCTCTAGTATAACTGTATTGTCCTCCTATCTTTCTGTCGGTATATGTATG
TGTGGATCGATTCTGTCTTCGATCCGTTTTTTTTCTGGGAAATCCTAAAT
ATTTCGATTGTGAGCGTGCTTTGAAATCTACTTGAATTCCGCGGGTGATA
ACAAGGGATGCTAGGTCAAACAAGTGAATGTGAGAGAGGGGAGATAAAAA
GAATAACAATACATGCGACAGGTAAACATGGTCGAGACGATGAGAGGAGA
GCAGGAGAAATGGATACTCGCCGAAAACAAGAAAGGCGCTGAGAGCACGC
GAGTATGTTGAAAGATGGTCTTTGGCGCAAAGGGCATGGGTCACAACAAT
GTATGGGATACTCTCTATACATGCAATTTCACTGGGACACAATAATGACG
GGACATACCACAGAGGCACGGAGGGGCATGCAGCTGCCATTATTAGATAG
CAATAAGATTATAAACGCAACGGGAGTCGATTACAAAAAGACCGTGAACC
ACAATCACGATAAGACATACCACAGCATGACGTTGGTGCATGCCACCGTC
AGGGATCATGGGATAACCAAAAGTATAAAGGAAGAATGGCACGAAAAACG
ATGGAGGTAATGTGTGTCTGTGTGTACGCGTTTGAATCAAGGAATAGCTG
AAGCAGAGAGGAGCTGTACCTCTAGTGTTTCCTAGTTTTCTTTTAGTTCA
TGCTTACACGCAAATTATGGAAGACGTGTGTCTGTAAGGGAAGAAGAGAG
TGAAAATTTTCGGGGCGAGACAACGGGGCGAGACAACGCTTGAATTACAT
ACGGGCAAACTTCGCCTCCGAGCGTCAAAATCAT
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protein sequence of NO01G04050.1

>NO01G04050.1-protein ID=NO01G04050.1-protein|Name=NO01G04050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=563bp
MVLKVISATYGHPEDATKSLDVTAQLAGAIIDTNAGGKLRVDVNAKTFGN
IDPAEGVVKVLKVTYSVAEGGAVEEVVTEEGAALELAGKAPPQGTLMILE
AKYGVLDDAEKCIDVTALVRDAAAAENNEKVAVKVDNNTMKRDPAPQKPK
QLKIFYQDGPSGPVREVLRNEGETASFAMGETTAPVHADKSSEVAAHEAA
TGTTVSGSPSGAAAIAWKSTDGQLLANGQTFRLKGVNWTGLETEARMLNG
LDSTTGAAYLDLLASYGFNGIKIPVSTTMALDMDGAPRKAPDDADLAGLS
AGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAW
VCLLNKVPRVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVP
GYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSER
VVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSE
FGDSNESAKGRIWSNCIVDYLTQTGLTNAFYSSGSVMGGDFKSPDTQRLE
NLQRLQENPTKL*
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Synonyms
Publications