NO01G03940, NO01G03940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03940 vs. NCBI_GenBank
Match: EWM29330.1 (pyruvate dehydrogenase e1 component alpha subunit [Nannochloropsis gaditana]) HSP 1 Score: 729.2 bits (1881), Expect = 7.300e-207 Identity = 360/410 (87.80%), Postives = 376/410 (91.71%), Query Frame = 0 Query: 6 MFTMRCGLRVLGHKVCSGSSVTAAAAARGMAPKAAFSSAASITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQPPLEELFRDIYSADEKGTNQYPPYIRMPDRTKSREFA 416 M TMR GL++LG K S P AAFSS +SITVDLSKAFD HNL++APPT ATATKEELVEYLRLMYTMRRMEITCDTEYK RTIRGFCHLYDGQEAVAVGVNSALD NDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSK HNFYGGQGIVGAQVPVGTGLAFAN+Y TPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNT+Y+TMGN+IPGIRMDGMNVVAVREGMKFVK+FVGSGNGP+FVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNL++HS+LS D VKEMEK IRKEVQDALKKAKAGSQPPLEELF+DIY D+KG NQYPPYIRMPDRTKSR FA Sbjct: 637 MLTMRRGLQLLGRKASRSSGGGLGGKVNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIY-CDDKGGNQYPPYIRMPDRTKSRTFA 1045
BLAST of NO01G03940 vs. NCBI_GenBank
Match: GAX27155.1 (pyruvate dehydrogenase E1 component alpha subunit [Fistulifera solaris]) HSP 1 Score: 542.0 bits (1395), Expect = 1.700e-150 Identity = 258/381 (67.72%), Postives = 307/381 (80.58%), Query Frame = 0 Query: 33 RGMAPKAAFSSAASITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQPPLEELFRDIYSAD--EKGTNQYPPYIRMPDRTKS 412 R + FS+ ++ DLS +F HNLE AP +K+EL LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVA G+ ALD DS+ITSYRCHC+AL+RG +V+Q+++ELFGF++G KGKGGSMHFY+KKHNFYGGQGIVGAQVPVG GLAFANKYNTPPGE MPVAI YGDGAANQGQIWEAANMA+LWKLPMIFCIENNQYGMGTSI+R SS++ YY MGN IPG+R+DGMNV+AVREGM+FVKD+ SG GP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VKK LVD + D +KE EK IRK+VQ + +AK ++P ++ LF DI++ D + +++PP+IRMPD KS Sbjct: 15 RAATSRYYFSTGPAVVFDLSGSFQTHNLETAPNETTECSKDELWNMFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILQALDEKDSYITSYRCHCIALARGGSVKQVVAELFGFEDGMTKGKGGSMHFYNKKHNFYGGQGIVGAQVPVGAGLAFANKYNTPPGERMPVAIGCYGDGAANQGQIWEAANMASLWKLPMIFCIENNQYGMGTSIDRHSSHSDYYKMGNHIPGVRIDGMNVLAVREGMRFVKDYCASGQGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLVDAEFATPDELKEAEKRIRKDVQQQVMEAKESAKPSMDSLFEDIFAKDLVSRSGSEFPPHIRMPDYAKS 395
BLAST of NO01G03940 vs. NCBI_GenBank
Match: EJK55386.1 (hypothetical protein THAOC_24894 [Thalassiosira oceanica]) HSP 1 Score: 535.4 bits (1378), Expect = 1.600e-148 Identity = 265/410 (64.63%), Postives = 314/410 (76.59%), Query Frame = 0 Query: 6 MFTMRCGLRVLGHK-VCSGSSVTAAAAARGMAPKAAFSSAASITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQPPLE-ELFRDIYSAD-EKGTNQYPPYIRMPDRTKSR 413 MF R +L V S +S A + RG SS+ +T DL+ +F+ HNLE AP T TK+EL+ + LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVA G+N+A D DSWITSYRCHC AL+RG TVE ++ ELFG G KGKGGSMHFY+K HNF+GGQGIVGAQVPVG GLAF N YN PGE M VAIA YGDGAANQGQIWEAANMA+LWKLPM+FCIENN YGMGTS+ER SS++ YY MGN IPG+R+DGMNV+AV+EGM+FVKDFVGSGNGP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VKK L+D ++ +KE EK IRK+V +K AKA +P +E LF ++++D K N++PP+IRMPD KS+ Sbjct: 1 MFASRAASLLLRRSAVPSAASNAACNSLRGGLSVRQMSSSDEVTFDLTGSFETHNLETAPSDTITMTKDELLSHFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAAFDLEDSWITSYRCHCTALARGGTVESVLGELFGNAGGQTKGKGGSMHFYNKAHNFFGGQGIVGAQVPVGLGLAFTNHYNAKPGETMNVAIACYGDGAANQGQIWEAANMASLWKLPMVFCIENNHYGMGTSMERHSSHSDYYKMGNHIPGVRIDGMNVLAVKEGMRFVKDFVGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPLEFVKKTLIDAGFADAEQIKETEKRIRKDVASQVKAAKASPKPTVEPHLFEYVFTSDGGKEQNEFPPHIRMPDFAKSK 410
BLAST of NO01G03940 vs. NCBI_GenBank
Match: GAX27614.1 (pyruvate dehydrogenase E1 component alpha subunit [Fistulifera solaris]) HSP 1 Score: 534.6 bits (1376), Expect = 2.600e-148 Identity = 264/399 (66.17%), Postives = 313/399 (78.45%), Query Frame = 0 Query: 15 VLGHKVCSGSSVTAAAAARGMAPKAAFSSAASITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQPPLEELFRDIYSAD--EKGTNQYPPYIRMPDRTKS 412 +L V S+ AA +R FS+ ++ DLS +F HNLE AP TK+EL LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVA G+ ALD DS+ITSYRCHC+AL+RG +V+Q+++ELFGF+EG KGKGGSMHFY+KK+NFYGGQGIVGAQVPVG GLAFANKYNTPPGE MPVAI YGDGAANQGQIWEAANMA+LWKLPMIFCIENNQYGMGTSI+R SS++ YY MGN IPG+R+DGMNV+AVREGM+FVKD SG GP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VKK LVD + D +KE EK IRK+VQ + +AK ++P ++ LF DI++ D + +++PP+IRMPD KS Sbjct: 1 MLSTVVKGNRSIVRAATSR------CFSTGPAV-FDLSGSFQTHNLETAPNETTECTKDELWNMFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILQALDEKDSYITSYRCHCIALARGGSVKQVVAELFGFEEGMTKGKGGSMHFYNKKNNFYGGQGIVGAQVPVGAGLAFANKYNTPPGERMPVAIGCYGDGAANQGQIWEAANMASLWKLPMIFCIENNQYGMGTSIDRHSSHSDYYKMGNHIPGVRIDGMNVLAVREGMRFVKDHCASGQGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLVDAEFATPDELKEAEKRIRKDVQQQVMEAKESAKPSMDSLFEDIFAKDLVSRSGSEFPPHIRMPDYAKS 392
BLAST of NO01G03940 vs. NCBI_GenBank
Match: XP_009035434.1 (hypothetical protein AURANDRAFT_53060 [Aureococcus anophagefferens] >EGB09355.1 hypothetical protein AURANDRAFT_53060 [Aureococcus anophagefferens]) HSP 1 Score: 531.9 bits (1369), Expect = 1.700e-147 Identity = 266/384 (69.27%), Postives = 306/384 (79.69%), Query Frame = 0 Query: 30 AAARGMAPKAAFS-SAASITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQP-PLEELFRDIYSADEKGTNQYPPYIRMPDRTKS 412 A +R P A+ + S +++T++ A+ H E AP A +KEEL+EY + MYTMRRMEITCD EYKARTIRGFCHLYDGQEA+ G+N+ALD DSWITSYRCHC+ L+RG TVE +++EL G G GKGGSMHFY+K+ NFYGGQGIVGAQVPVGTGLAFANKY TP GE MPVAI YGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSI RSSSN YYTMGN IPGI+MDGMNV++VREGMK VKD+VGSGNGP++VEM+TYRYHGHSMSDPGTTYRNRDEI RSTRDPIE VKK LVDH+ + + +K MEK IRKEV DA +AKAG+ P + +L +IY E G ++ YIRMPD TKS Sbjct: 6 ALSRAARPAASSARSMSAVTIEFPGAYATHRCE-APDAVAETSKEELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGINAALDLEDSWITSYRCHCIMLARGGTVEGVLAELMGNAHGETGGKGGSMHFYNKEQNFYGGQGIVGAQVPVGTGLAFANKYKTPLGEKMPVAIGCYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSISRSSSNNDYYTMGNLIPGIKMDGMNVLSVREGMKHVKDYVGSGNGPMYVEMSTYRYHGHSMSDPGTTYRNRDEIAAMRSTRDPIEHVKKMLVDHTDATEEELKAMEKVIRKEVADACDRAKAGAPPDSIADLTNNIY-LTEDGKSEPQAYIRMPDYTKS 387
BLAST of NO01G03940 vs. NCBI_GenBank
Match: XP_002184042.1 (precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit [Phaeodactylum tricornutum CCAP 1055/1] >EEC44711.1 precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 524.6 bits (1350), Expect = 2.700e-145 Identity = 255/384 (66.41%), Postives = 307/384 (79.95%), Query Frame = 0 Query: 30 AAARGMAPKAAFSSAASITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQPPLEELFRDIY--SADEKGTNQYPPYIRMPDRTKS 412 AAA+ + +FS++ T DL+ F HNL++AP TATK+ELV+ LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVA G+ +A + DSWITSYRCHC+AL+RG +V Q++ ELFG +G +GKGGSMHFY+KKHNF+GGQGIVGAQVPVG GLAFANKYN PGE M VAIA YGDGAANQGQIWE+ANM+ALWKLPMIFCIENN YGMGTSI+R SS + YY MGN IPG+R+DGMNV+AVREGM+F K+F GSGNGP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VKK L+D+ + +K EK IRK VQ+ + KAK + PPL+EL + I+ S + + ++YPP+IRMP+ KS Sbjct: 23 AAAKTSSLFRSFSTSDG-TFDLTGCFQTHNLDSAPSESVTATKQELVDIFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILNAFEPEDSWITSYRCHCIALARGGSVRQVVGELFGVIDGMSRGKGGSMHFYNKKHNFFGGQGIVGAQVPVGAGLAFANKYNAKPGEKMNVAIACYGDGAANQGQIWESANMSALWKLPMIFCIENNHYGMGTSIDRHSSISDYYKMGNSIPGLRIDGMNVLAVREGMRFAKEFCGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLLDNEFIDEAEIKSTEKRIRKSVQEEVMKAKESTSPPLDELTKHIFATSLEPQCDSEYPPHIRMPNYEKS 405
BLAST of NO01G03940 vs. NCBI_GenBank
Match: XP_002287523.1 (pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335] >EED94966.1 pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 523.9 bits (1348), Expect = 4.700e-145 Identity = 248/374 (66.31%), Postives = 303/374 (81.02%), Query Frame = 0 Query: 43 SAASITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQPPLE-ELFRDIYSAD-EKGTNQYPPYIRMPDRTKSREF 415 S + T DL+ +F+ +NL+ P TK+EL+ + LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVA G+N+A D DSWITSYRCHC AL+RG +V ++ ELFG +G KGKGGSMHFY+K HNF+GGQGIVGAQVPVG GLAFAN YN PG+ M VAIA YGDGAANQGQIWE+ANMA+LWKLPMIFCIENN YGMGTS++R SS++ YY MGN IPG+R+DGMNV+AV+EGM+FVKD+VG+GNGP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VK+ LVD ++ +KE+EK IRK+V + +K+AKA S+P +E LF +YS+D K N++PP+IRMPD KS+ + Sbjct: 2 STDTATFDLTGSFETYNLDTQPNNTIEMTKDELLSHFELMYTMRRMEITCDNEYKARAIRGFCHLYDGQEAVATGINAAFDPEDSWITSYRCHCTALARGGSVASVLGELFGHVDGQTKGKGGSMHFYNKAHNFFGGQGIVGAQVPVGLGLAFANHYNATPGKPMQVAIACYGDGAANQGQIWESANMASLWKLPMIFCIENNHYGMGTSMDRHSSHSDYYKMGNHIPGVRIDGMNVLAVKEGMRFVKDYVGNGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPLEFVKRTLVDAGFTDAEEIKEIEKRIRKDVANQVKQAKASSKPTVEPHLFEYVYSSDGGKEQNEFPPHIRMPDFAKSKNY 375
BLAST of NO01G03940 vs. NCBI_GenBank
Match: GAX92888.1 (pyruvate dehydrogenase E1 alpha subunit [Pythium insidiosum]) HSP 1 Score: 510.8 bits (1314), Expect = 4.100e-141 Identity = 253/390 (64.87%), Postives = 304/390 (77.95%), Query Frame = 0 Query: 24 SSVTAAAAARGMAPKAAFSSAAS--ITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQPPLEELFRDIYSADEKGTNQYPPYIRMPDRTKS 412 ++ T A A AFS+AA+ I+ +L+ F LH LE P T A ++EEL+ + RLMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVA GV +ALD DSWITSYR HC L+RG TV++I+ ELFG G +KGKGGSMHFY K++NF+GGQGIVGAQVPVG GLAFA+KYN MP AI M+GDGAANQGQIWEAANMAALWKLP IFCIENN YGMGTS ERSSSNT YYTMGNKIPG+ DGM+V+AVRE +KF+K + G GNGPI+VEM+TYRYHGHSMSDPG TYRNR+EI Q R++RDPIE VKK L+D+++ +++ +KE+EK +R EV A K+AKA +P F D+Y+ D KG ++YPP+IR+PD KS Sbjct: 7 AAATRQALRASPAAARAFSAAANGEISFELANPFKLHRLEKGPETVAKTSREELLGFYRLMYTMRRMEITCDNEYKARQIRGFCHLYDGQEAVATGVEAALDRTDSWITSYRNHCTMLARGGTVKEILGELFGMSAGAIKGKGGSMHFYKKENNFFGGQGIVGAQVPVGVGLAFASKYNHKGDGLMPCAITMFGDGAANQGQIWEAANMAALWKLPAIFCIENNHYGMGTSAERSSSNTEYYTMGNKIPGVWCDGMDVLAVRECVKFLKQWCGEGNGPIYVEMSTYRYHGHSMSDPGVTYRNREEISQMRASRDPIESVKKRLLDNNLATAEEIKEIEKEVRAEVVKAAKEAKASGRPAEHTAFEDVYT-DGKGGSEYPPFIRLPDYAKS 395
BLAST of NO01G03940 vs. NCBI_GenBank
Match: XP_024584093.1 (pyruvate dehydrogenase (acetyl-transferring) e1 alpha subunit [Plasmopara halstedii] >CEG47724.1 pyruvate dehydrogenase (acetyl-transferring) e1 alpha subunit [Plasmopara halstedii]) HSP 1 Score: 506.5 bits (1303), Expect = 7.700e-140 Identity = 251/387 (64.86%), Postives = 297/387 (76.74%), Query Frame = 0 Query: 25 SVTAAAAARGMAPKAAFSSAASITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQPPLEELFRDIYSADEKGTNQYPPYIRMPDRTKS 412 ++T +A A AA +S+ + S F+LH LE PP A +EE+++Y LMYTMRRMEIT D EYKARTIRGFCHLYDGQEAVA GV +ALD NDSWITSYR HC+ L+RG TV+ I++ELFG G GKGGSMHFY+KK NFYGGQGIVGAQVPVG GLAFA+KYN MP AI M+GDGAANQGQ++EAANMAALWKLP+IFCIENNQYGMGTS +RSS+NT YYT+GNKIPGI+ DG +V+AVRE KF+K + G GNGPIFVEMNTYRYHGHSMSDPG TYRNRDEI Q R++RDPIE VKK +++ + ++D +KE+EK +R EV A K AKA +P F D+Y+ D KG N YPP+IR PD TKS Sbjct: 7 ALTRSATKATRAFSAATNSSNEAKFEFSMPFELHRLEQGPPEFAVTNREEMLDYYNLMYTMRRMEITNDNEYKARTIRGFCHLYDGQEAVATGVEAALDRNDSWITSYRNHCIMLARGGTVKDILAELFGMASGATGGKGGSMHFYNKKANFYGGQGIVGAQVPVGAGLAFASKYNHKGDGPMPCAITMFGDGAANQGQVFEAANMAALWKLPVIFCIENNQYGMGTSTKRSSNNTDYYTLGNKIPGIKCDGNDVLAVRECTKFMKKWCGEGNGPIFVEMNTYRYHGHSMSDPGVTYRNRDEISQMRASRDPIEMVKKRMIEAELATADEIKEIEKKVRAEVVKATKDAKAAGKPHESAAFTDVYT-DGKGNNAYPPFIRFPDYTKS 392
BLAST of NO01G03940 vs. NCBI_GenBank
Match: POM65406.1 (Pyruvate dehydrogenase E1 component subunit alpha [Phytophthora palmivora var. palmivora]) HSP 1 Score: 501.5 bits (1290), Expect = 2.500e-138 Identity = 247/384 (64.32%), Postives = 296/384 (77.08%), Query Frame = 0 Query: 28 AAAAARGMAPKAAFSSAASITVDLSKAFDLHNLEAAPPTEATATKEELVEYLRLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVAVGVNSALDFNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKKHNFYGGQGIVGAQVPVGTGLAFANKYNTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTRYYTMGNKIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPIFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLVDHSMLSSDGVKEMEKGIRKEVQDALKKAKAGSQPPLEELFRDIYSADEKGTNQYPPYIRMPDRTKS 412 AA A R + AA +++ + S F+LH L+ P A ++E++EY LMYTMRRMEIT D EYKAR IRGFCHLYDGQEAVA GV +ALD DSWITSYR HC+ L+RG+TV+ +++ELFG K+G GKGGSMHFY K NFYGGQGIVGAQVPVG GLAFA+KYN MP AI M+GDGA+NQGQ++EAANMAALWKLP+IFCIENN YGMGTSI+RSS+NT YYTMGNKIPGI+ DG +V+AVRE KF+K + G GNGPIFVEMNTYRYHGHSMSDPG TYRNRDEI Q R+TRDPIE VKK +++ + ++D +KE+EK +R EV A K+AKA +P L F D+Y+ D KG N+YPP+IR PD KS Sbjct: 62 AAPATRAFS--AAANASGEAKFEFSTPFELHRLDQGPAEFAVTNRKEMLEYYELMYTMRRMEITNDNEYKARNIRGFCHLYDGQEAVATGVEAALDRKDSWITSYRNHCIMLARGATVKDVLAELFGMKDGATGGKGGSMHFYKKDTNFYGGQGIVGAQVPVGAGLAFASKYNHNGEGLMPCAITMFGDGASNQGQVFEAANMAALWKLPVIFCIENNHYGMGTSIQRSSNNTDYYTMGNKIPGIKCDGNDVLAVRECTKFLKQWCGEGNGPIFVEMNTYRYHGHSMSDPGVTYRNRDEISQMRATRDPIELVKKRMIEAELATADEIKELEKKVRAEVVKATKEAKASGKPDLSAAFTDVYT-DGKGKNEYPPFIRFPDNAKS 442 The following BLAST results are available for this feature:
BLAST of NO01G03940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03940 ID=NO01G03940|Name=NO01G03940|organism=Nannochloropsis oceanica|type=gene|length=1473bpback to top protein sequence of NO01G03940.1 >NO01G03940.1-protein ID=NO01G03940.1-protein|Name=NO01G03940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=416bpback to top Synonyms
Publications
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