Naga_100136g4, gene1301 (gene) Nannochloropsis gaditana

Overview
NameNaga_100136g4
Unique Namegene1301
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:406348..411056 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100136g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:406348..411056 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006091generation of precursor metabolites and energy
GO:0009058biosynthetic process
GO:0005975carbohydrate metabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03940NO01G03940Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1347rna1347-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1347rna1347Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1347

>rna1347-protein ID=rna1347-protein|Name=rna1347|organism=Nannochloropsis gaditana|type=polypeptide|length=1079bp
MSARKINPFKDTNVLHRLRAKARTGFKSPGWVMAAVTAIPPCTPPPQPRT
VPNLVLPTDRLLVGYERKFPEAMQDVVRSVDGRLVNRSMVFVQKQYAFIQ
EGHSEAEAFKLTEAALAEEEGKALKQLEEVTAQARATGAIPALSAMERQK
DGRWDRLQFWRKELSSSPYETWSHGKQASLDRWLTKDMLEWEPHQTRYLG
QQRFQDSLKAARETIFADIVKPLREKLRTAESAAGTALTPEDLYSFQLEQ
AVGEYQEWEEKMLARQAGTWGSEEIAALQEWLERNHALVMPGFQDPRPQV
AGGFADQARRHARGQVLQYIAFPLLRPEFQSIPYLSRYLARAFAEVAKQE
AGRGLRPILISGPLGRREADFAAGEAMLNDALPKLVVKTFVTVAVERPFA
WELMRCLLTERIRTAASAADLETLPELRGLGGREAMAQHVEGLIQHLTEV
LMTLAADEDTSGLGQDIDVAYGAVNELHRVAQELLHAGEAGAEGGAEGGA
EAGHAYDAAIDAYKQEHHGWVAEDLAIGEALRKFDPKVEAMFGVGVPEAH
KAQEAAVERKQSQVLEEAGRDFAFRKREAGRWAWERSVGLGEVDEYDKRW
LRRPQKGRVAAERGEEAVANPNTFSQTPHSRSLPYRMLTMRRGLQLLGRK
ASRSSGGGLGGKVNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSAT
ATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVN
SALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHF
YSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAA
NQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRI
PGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGT
TYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDA
LKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKSRTFAMGRPR
RTGTARGTRGEIRGELNNGEKDERLFRLH
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Synonyms
Publications