NO01G03770, NO01G03770 (gene) Nannochloropsis oceanica

Overview
NameNO01G03770
Unique NameNO01G03770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3301
Alignment locationchr1:1013437..1016737 -

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Properties
Property NameValue
DescriptionTranscription initiation factor iib
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1013437..1016737 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013137Znf_TFIIB
IPR036915Cyclin-like_sf
IPR013150TFIIB_cyclin
IPR000812TFIIB
Vocabulary: Molecular Function
TermDefinition
GO:0017025TBP-class protein binding
Vocabulary: Biological Process
TermDefinition
GO:0070897transcription preinitiation complex assembly
GO:0006355regulation of transcription, DNA-templated
GO:0009987cellular process
GO:0009058biosynthetic process
Homology
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: EGT41143.1 (hypothetical protein CAEBREN_12544, partial [Caenorhabditis brenneri])

HSP 1 Score: 99.8 bits (247), Expect = 2.400e-17
Identity = 73/280 (26.07%), Postives = 122/280 (43.57%), Query Frame = 0 
Query:  104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLS 370
            P  C     + +I DHR+GD++C  CG V  +RLVD G EW  + +     DPSRV         GG+L  T +  +GGS                              +   LAN + ++    ++       L+ +    +HL   + +    I          +GK      AA LY+AC+  GV ++  E+C+    +K E+GR    I R ++  LE +  +  + + ++ G L LP  ++AAA  + K A +++   G  P ++A AA+ + S
Sbjct:    4 PVQCPVHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNERSGNDPSRVGAPENPLLSGGDLSTTIAVGFGGSD-----------------------------SDNSLANAQRKSMNNTDRQMTAAMSLIREMSERIHLPRNIQENASRIFKDVLDSRALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKEIGRCFKIIIRNLETNLEQI--TSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMAS 252
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: EPB86427.1 (transcription initiation factor TFIIB [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 99.8 bits (247), Expect = 2.400e-17
Identity = 81/343 (23.62%), Postives = 143/343 (41.69%), Query Frame = 0 
Query:  109 KCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRVGG---------ELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEKVCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPL 443
            K R  +I  +  SGD++C  CG V  +R+VD  +EW  + +++G  DPSRVG          +L    SR  GGS                             + G  + NK  R    + K    ++  C S+ L   V+     +      E + +GK+  V++A  + +AC+  GV ++  E+C+     K E+GR  N +  K+      +  PE+++ ++   LRLP+ ++   VD+++TA+ +    G  P ++A A + L+S                                      ARS  ++     V   T+K A+ +LY  +E+++ L
Sbjct:   34 KIRPPNIAEEFASGDLVCGDCGLVLGDRIVDTRSEWRTFANDEG-DDPSRVGAASNPLLDGDQLDTIISRKDGGS---------------------GISKTLNKVQGKQVQNKGDRNMAAIYKD---ITAMCDSISLSRLVSDTAKQLYKRIEDEKLLRGKSNDVIIATCICIACRQEGVARTFREICALTRVPKKEIGRCCNALKSKI-FTSTNIMEPEDLMTRFCSNLRLPMHVQKTGVDLVRTAKTLGTLGGKSPISIAAACIYLVS---------------------------------YLCQHARSTKDIANVAGVSEATIKAAYKVLYAEKEKLIDL 317
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: PIC25371.1 (hypothetical protein B9Z55_018329 [Caenorhabditis nigoni])

HSP 1 Score: 99.8 bits (247), Expect = 2.400e-17
Identity = 73/280 (26.07%), Postives = 122/280 (43.57%), Query Frame = 0 
Query:  104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLS 370
            P  C     + +I DHR+GD++C  CG V  +RLVD G EW  + +     DPSRV         GG+L  T +  +GGS                              +   LAN + ++    ++       L+ +    +HL   + +    I          +GK      AA LY+AC+  GV ++  E+C+    +K E+GR    I R ++  LE +  +  + + ++ G L LP  ++AAA  + K A +++   G  P ++A AA+ + S
Sbjct:    4 PVQCPVHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNERSGNDPSRVGAPENPLLSGGDLSTTIAVGFGGSD-----------------------------SDNSLANAQRKSMNNTDRQMTAAMSLIREMSERIHLPRNIQENASRIFKDVLDSRALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKEIGRCFKIIIRNLETNLEQI--TSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMAS 252
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: XP_003115733.1 (CRE-TTB-1 protein [Caenorhabditis remanei] >EFP00221.1 CRE-TTB-1 protein [Caenorhabditis remanei] >OZF90366.1 hypothetical protein FL82_13384, partial [Caenorhabditis remanei])

HSP 1 Score: 99.4 bits (246), Expect = 3.200e-17
Identity = 73/280 (26.07%), Postives = 122/280 (43.57%), Query Frame = 0 
Query:  104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLS 370
            P  C     + +I DHR+GD++C  CG V  +RLVD G EW  + +     DPSRV         GG+L  T +  +GGS                              +   LAN + ++    ++       L+ +    +HL   + +    I          +GK      AA LY+AC+  GV ++  E+C+    +K E+GR    I R ++  LE +  +  + + ++ G L LP  ++AAA  + K A +++   G  P ++A AA+ + S
Sbjct:    4 PVQCPIHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNERSGNDPSRVGAPENPLLSGGDLSTTIAVGFGGSD-----------------------------SDNSLANAQRKSMNNTDRQMTAAMSLIREMSERIHLPRNIQENASRIFKDVLDSRALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKEIGRCFKIIIRNLETNLEQI--TSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMAS 252
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: NP_503146.1 (Transcription initiation factor IIB [Caenorhabditis elegans] >O16991.2 RecName: Full=Transcription initiation factor IIB; AltName: Full=General transcription factor TFIIB >CCD74279.1 Transcription initiation factor IIB [Caenorhabditis elegans])

HSP 1 Score: 99.4 bits (246), Expect = 3.200e-17
Identity = 73/280 (26.07%), Postives = 121/280 (43.21%), Query Frame = 0 
Query:  104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLS 370
            P  C     + +I DHR+GD++C  CG V  +RLVD G EW  + +     DPSRV         GG+L  T +  +GGS                              +   LAN + ++    ++       L+ +    +HL   +      I          +GK      AA LY+AC+  GV ++  E+C+    +K E+GR    I R ++  LE +  +  + + ++ G L LP  ++AAA  + K A +++   G  P ++A AA+ + S
Sbjct:    4 PVQCPIHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNERSGNDPSRVGAPENPLLSGGDLSTTIAVGFGGSD-----------------------------SDNSLANAQRKSMNNTDRQMTAAMSLIREMSERIHLPRNIQDSASRIFKDVLESKALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKEIGRCFKIIVRSLETNLEQI--TSADFMSRFCGNLSLPNSIQAAATRIAKCAVDMDLVAGRTPISIAAAAIYMAS 252
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: POM39317.1 (hypothetical protein FL81_20401 [Caenorhabditis remanei])

HSP 1 Score: 99.4 bits (246), Expect = 3.200e-17
Identity = 73/280 (26.07%), Postives = 122/280 (43.57%), Query Frame = 0 
Query:  104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLS 370
            P  C     + +I DHR+GD++C  CG V  +RLVD G EW  + +     DPSRV         GG+L  T +  +GGS                              +   LAN + ++    ++       L+ +    +HL   + +    I          +GK      AA LY+AC+  GV ++  E+C+    +K E+GR    I R ++  LE +  +  + + ++ G L LP  ++AAA  + K A +++   G  P ++A AA+ + S
Sbjct:    4 PVQCPIHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNERSGNDPSRVGAPENPLLSGGDLSTTIAVGFGGSD-----------------------------SDNSLANAQRKSMNNTDRQMTAAMSLIREMSERIHLPRNIQENASRIFKDVLDSRALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKEIGRCFKIIIRNLETNLEQI--TSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMAS 252
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: XP_002647378.1 (C. briggsae CBR-TTB-1 protein [Caenorhabditis briggsae] >CAP26742.1 Protein CBR-TTB-1 [Caenorhabditis briggsae])

HSP 1 Score: 99.0 bits (245), Expect = 4.100e-17
Identity = 73/280 (26.07%), Postives = 121/280 (43.21%), Query Frame = 0 
Query:  104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLS 370
            P  C     + +I DHR+GD++C  CG V  +RLVD G EW  + +     DPSRV         GG+L  T +  +GGS                              +   LAN + ++    ++       L+ +    +HL   +      I          +GK      AA LY+AC+  GV ++  E+C+    +K E+GR    I R ++  LE +  +  + + ++ G L LP  ++AAA  + K A +++   G  P ++A AA+ + S
Sbjct:    4 PVQCPVHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNERSGNDPSRVGAPENPLLTGGDLSTTIAVGFGGSD-----------------------------SDNSLANAQRKSMNNTDRQMTAAMSLIREMSERIHLPRNIQDNASRIFKDVLDSRALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKEIGRCFKIIIRNLETNLEQI--TSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMAS 252
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: XP_018292234.1 (hypothetical protein PHYBLDRAFT_181146 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD74194.1 hypothetical protein PHYBLDRAFT_181146 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 97.8 bits (242), Expect = 9.200e-17
Identity = 88/368 (23.91%), Postives = 158/368 (42.93%), Query Frame = 0 
Query:  107 CTKCR--SLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGA--DLANKKSRA-----QGKLEKVCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPL--VYAAEMASHLLE 455
            C  CR     I+ +  SGD++C  CG V  +R++D  +EW  + +++G  DPSRV         G +L    SRI GG                               TGA  DL     RA     +  L ++   +S  C S+ L + V+     +      E + +GK+   +VAA +++AC+   V ++  E+C+     K E+GR    +  K++     + + E+++ ++   L+LP  ++ + VD++K A+E+    G  P ++A A + L+S   + P+                               AR +  V G + V   T+K A+  LY  +ER++ L  +Y++++     E
Sbjct:   32 CPDCRVDPPQIVEEFASGDLVCGECGLVLGDRIIDTRSEWRTFANDEG-DDPSRVGAAANPLLDGNQLDTIISRIDGG-------------------------------TGAARDLNRVHGRATAVRGERNLVQIYKEISAMCDSISLSKLVSDTAKQLYKRVEDEKLLRGKSSDAIVAACIFIACRQENVGRTYREICALTRVTKKEIGRCYKALQSKLQT-NTTIMNSEDLMSRFCSNLQLPNYVQKSGVDLVKRAKELGTLAGKSPISVAAACIYLVSYLFRQPK------------------------------TARDIAHVAGVSEV---TIKTAYKSLYAEKERLINLETLYSSQITDITFE 333
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: KRY77964.1 (Transcription initiation factor IIB, partial [Trichinella pseudospiralis] >KRZ44521.1 Transcription initiation factor IIB, partial [Trichinella pseudospiralis])

HSP 1 Score: 96.7 bits (239), Expect = 2.100e-16
Identity = 71/279 (25.45%), Postives = 122/279 (43.73%), Query Frame = 0 
Query:  102 MNPETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRVGGEL------GGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLAN-KKSRAQGKLEKVCM----LLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLS 370
            M+  +C      ++I DHR+GD+IC  CG V  +R+VD  +EW  + ++    DPSRVG         GG A+ I GG                                   L+N +K +A    ++V M    ++ +    +HL + +      +          KGK    + +A LY+AC+  GV ++  E+C+    +K EVGR    I R ++     + +  + + ++ G L LP  ++ AA  + + A E +   G  P ++A AA+ + S
Sbjct:    3 MSNVSCPAHPDAELIEDHRAGDMICMECGLVVGDRIVDVSSEWRSFSNDSNSKDPSRVGSPENNLMTGGGLATSIAGGGSD----------------------------ESRSLSNLQKRQASNSQDRVLMHAFGIIREMADRIHLTKSIQDQANLLFKQVQETKALKGKNNDAVASACLYIACRKDGVPRTFKEICAVSKLSKKEVGRCFKLILRALET-NLNLITTSDFMSRFCGNLNLPQYVQTAATHIARAAVENDLVSGRSPVSIAAAAIYMAS 252
[Close]
BLAST of NO01G03770 vs. NCBI_GenBank
Match: KRY91740.1 (Transcription initiation factor IIB [Trichinella pseudospiralis])

HSP 1 Score: 96.7 bits (239), Expect = 2.100e-16
Identity = 71/279 (25.45%), Postives = 122/279 (43.73%), Query Frame = 0 
Query:  102 MNPETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRVGGEL------GGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLAN-KKSRAQGKLEKVCM----LLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLS 370
            M+  +C      ++I DHR+GD+IC  CG V  +R+VD  +EW  + ++    DPSRVG         GG A+ I GG                                   L+N +K +A    ++V M    ++ +    +HL + +      +          KGK    + +A LY+AC+  GV ++  E+C+    +K EVGR    I R ++     + +  + + ++ G L LP  ++ AA  + + A E +   G  P ++A AA+ + S
Sbjct:    1 MSNVSCPAHPDAELIEDHRAGDMICMECGLVVGDRIVDVSSEWRSFSNDSNSKDPSRVGSPENNLMTGGGLATSIAGGGSD----------------------------ESRSLSNLQKRQASNSQDRVLMHAFGIIREMADRIHLTKSIQDQANLLFKQVQETKALKGKNNDAVASACLYIACRKDGVPRTFKEICAVSKLSKKEVGRCFKLILRALET-NLNLITTSDFMSRFCGNLNLPQYVQTAATHIARAAVENDLVSGRSPVSIAAAAIYMAS 250
The following BLAST results are available for this feature:
BLAST of NO01G03770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EGT41143.12.400e-1726.07hypothetical protein CAEBREN_12544, partial [Caeno... [more]
EPB86427.12.400e-1723.62transcription initiation factor TFIIB [Mucor circi... [more]
PIC25371.12.400e-1726.07hypothetical protein B9Z55_018329 [Caenorhabditis ... [more]
XP_003115733.13.200e-1726.07CRE-TTB-1 protein [Caenorhabditis remanei] >EFP002... [more]
NP_503146.13.200e-1726.07Transcription initiation factor IIB [Caenorhabditi... [more]
POM39317.13.200e-1726.07hypothetical protein FL81_20401 [Caenorhabditis re... [more]
XP_002647378.14.100e-1726.07C. briggsae CBR-TTB-1 protein [Caenorhabditis brig... [more]
XP_018292234.19.200e-1723.91hypothetical protein PHYBLDRAFT_181146 [Phycomyces... [more]
KRY77964.12.100e-1625.45Transcription initiation factor IIB, partial [Tric... [more]
KRY91740.12.100e-1625.45Transcription initiation factor IIB [Trichinella p... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007921NSK007921Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03770.2NO01G03770.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G03770.1NO01G03770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577178gene_387Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100152g3gene1318Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03770.2NO01G03770.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G03770.1NO01G03770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03770 ID=NO01G03770|Name=NO01G03770|organism=Nannochloropsis oceanica|type=gene|length=3301bp
TTTGTCTGTGGACCCGAAATCTGAAGGCTCCCTCTGCATTGTCTTGTTTT
GGTAAGGAGTGTCACAACCACACTCCCGACATCTGCTCCACATATCCTCC
GAGTCCACCCACACCCCATACACTTCCTTGACATGTTGGTGGGAAGGACT
ATGGGTGGTGGTCTCTGTGGTATTTCTTTTGTGACGCCTCGCTCCCGCAC
CCCTCACGTCCACGTTTTCCCTCCGTTCGGGTTAGGGTTAGGCTCCATCT
CCTCCTTCCCCAACTCACACAAACCCGCACACATGCACACACCCATTACA
GCTGCTCACACCAGCGCATACGCCCGACACTGTCAGTACCGCCGCTTATT
CACAACCAACAACCGTGGCCCCGTATTATCCCCTTTTCCCTCAACTTGGC
TCTTCCACCACCACGTCCTCGTTAATATTAGCGCCATGAATCCCGAGACG
TGCACCAAGTGCAGGAGCCTCGACATAATCACAGgttcgttttctttgtc
tcgtcatcttgcgtccttgagttgcggtcagaaacccgtttcccccctcg
agttccctcaattcccacccttccaaccagggataagatagacagcacaa
caacccacccagacgcggaaacaataacttcggtgcgcttcttcttggac
ggtgtaggtgtgtgacgcaggctatgggaagagaaagatgagtagggggg
gaaggcgatccattcgtcgtagccgccctacctctctccctaggcctctc
cctcgcaagcctgccgaccgactcccactcctccaaagagagacgcaatc
gaaaaaaatacccccactccccccggcctagcccgtccctctctccctct
ctcgcgcaagcgagcggcgggagccgtgaagaccaccaacagatacaaaa
gagaagcaaacttccctctccctcgttctcctccccctcaaacgtaaccc
gtcaaattgatacgatcaatctaaccttattccctgtgtggcatatttac
atcccaacgtaaccctttttcgctctccggcgtcatgcgagaacggcatg
cgctgaccatcccaccccagttcctgtgttggtgcccctgttggtgctgc
tgctccccttccttctgcatgccttgttgtcgagcccagtgctcattttc
ggaacgggtgaccaagcggcttgcagcccacctttccttccaccatccca
cgtgatactcaggggttcagggcgtattgtaatgttattgttatggtcgt
tgcaggcgaacattcatgtgtgtctgtacctcttgctacaagcccagcct
cttatttgagcaattcagcagggaccacaaattgtactacagccggaagt
gtttccagcaactttcaaaattgatcatttgcgggtcattcatgtgaaat
tcgtgacttaacctcgggtctgcaatgacgagcaagttttgtcttgtctc
tgttagcagcctttctctcgtcctggacgtcgtggtggttgtcgtcgctg
cgagaggcttcgtttcaagcgatgtgaccggccagccaccccttcacttt
gcttgtatgtagtaaatatacgtttgtgggagttcattgtacggtagcca
agacgctaggttcttggatggaatttgtcgttattggagctgacctttgc
agcgacgcgacggggatgcagcgagatgagactgaagttttattttggct
tgaatgaggcgaagaaatcagctcttgtcgacactttccgcccgcttgct
ccactcgttggaagatggagcctcttgtcttgcaacaagggagggccttt
atcctttttgtgtcgccgtggttgcggtagttaacggtgtgtgcttttag
atcgtgattgttggcgagacgacagcacactctgccagtaccgtcatcct
ctcgcgcatgccccagctcctgtgctgctgctgccgcagagcaaggcctt
cgattacaccgccgacaattaccgccgccaccactatgaagcgagggagt
cttataatatattgccagtctagatgccttccttcctcgccccttttcct
cttttccacccgccctcgctttcaacccctccactcaccatatcctcgat
ccctccctcctctttcttcttccttcaaatcaaaacagATCACCGGTCCG
GCGACGTGATCTGCCGCGGCTGTGGAGAAGTCCAAGCTGAGCGCCTTGTG
GACGAAGGAGCCGAGTGGAACCGCTATGATGACAATGATGGAAAAGGAGA
CCCTTCCCGGGTGGGGGGTGAGCTGGGAGGAACGGCCTCTCGTATATGGG
GGGGCTCATCGGCAAGTATGCCAGGGGCAGGACGAGGGGGAGGAAGCGGG
GGAGGGAGCAGTAAGAAAAGGAAGGCGCAGCAAGGGGCGGCCGCTTTGAC
GGGGGCAGATCTAGCAAATAAGAAAAGTCGGGCACAGGGGAAATTGGAGA
AGGTGTGTATGCTCTTATCGGACTCGTGCCGGTCGTTGCACTTGGACGAG
AGGGTCGCTCAGGTTGGTTTTACAATCGCCGACAGCGCAAGCACGGAGGG
GGTCTTTAAGGGAAAGGCTGAAAGTGTATTGGTTGCGGCCGTATTATACT
TGGCGTGCAAGCACTGTGGGGTCCTCAAGAGCATTGCCGAGGTCTGCTCG
GAGTTGGGGACGAACAAATTTGAGGTAGGGCGAGTGATCAACGATATCTC
CCGGAAGGTCAAGGCATTGGAAGCCGTCGTTTTCTCTCCCGAGGAAGTAG
TGGATAAATATGGGGGCCAGTTGCGGCTCCCGTTGGGTTTGCGCGCGGCG
GCGGTCGATGTAATGAAAACTGCGAGGGAAGTGGAGGGGTTTCAGGGCAT
GCACCCGCAAACGCTTGCGGGGGCGGCCTTGTTGTTGTTGAGCAACACGA
AAAAGATGCCGCAGTTGGTGGTGGCAGATGGAGTCGTAAAGAAGGAAGAA
GGGATAAAAAGCGGGGGGCAGAGGGAGGCGTTGGCCGGGACTGTTTTCCC
ACCTCCTGCGCGGTCGGTGGGAGAGGTGACGGGTGCAACGCTTGTGGGGG
TAGGGACGATGAAGAAAGCGCATGCCCTTTTGTATGAGCATCGAGAGAGG
GTTGTTCCGTTGGTGTACGCGGCGGAGATGGCGAGTCATTTACTGGAGTT
GAGTCCTCCGACGGAGTTGGATTCGTAGAAAGCGAGGGAGCGAAAGAGGT
GCAGGATGTACAAAATCAAAAGGAACAGAGAAAGGAGCGAGCCGTGTGTG
TACAACTAACAAACGAAACATCGAACAAATAGACAGCGAGAAACTCAAAG
C
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protein sequence of NO01G03770.2

>NO01G03770.2-protein ID=NO01G03770.2-protein|Name=NO01G03770.2|organism=Nannochloropsis oceanica|type=polypeptide|length=385bp
MPSFLAPFPLFHPPSLSTPPLTISSIPPSSFFFLQIKTDHRSGDVICRGC
GEVQAERLVDEGAEWNRYDDNDGKGDPSRVGGELGGTASRIWGGSSASMP
GAGRGGGSGGGSSKKRKAQQGAAALTGADLANKKSRAQGKLEKVCMLLSD
SCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGV
LKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQL
RLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVV
ADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAH
ALLYEHRERVVPLVYAAEMASHLLELSPPTELDS*
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protein sequence of NO01G03770.1

>NO01G03770.1-protein ID=NO01G03770.1-protein|Name=NO01G03770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bp
MLVGRTMGGGLCGISFVTPRSRTPHVHVFPPFGLGLGSISSFPNSHKPAH
MHTPITAAHTSAYARHCQYRRLFTTNNRGPVLSPFPSTWLFHHHVLVNIS
AMNPETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDN
DGKGDPSRVGGELGGTASRIWGGSSASMPGAGRGGGSGGGSSKKRKAQQG
AAALTGADLANKKSRAQGKLEKVCMLLSDSCRSLHLDERVAQVGFTIADS
ASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRV
INDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVE
GFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALA
GTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPLVYAAEMAS
HLLELSPPTELDS*
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Synonyms
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