NO01G03770, NO01G03770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03770 vs. NCBI_GenBank
Match: EWM29304.1 (transcription initiation factor iib [Nannochloropsis gaditana]) HSP 1 Score: 454.9 bits (1169), Expect = 3.000e-124 Identity = 240/366 (65.57%), Postives = 282/366 (77.05%), Query Frame = 0 Query: 104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRVGGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEKVCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVV-----ADGVVK---KEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPLVYAAEMASHLLELSPPTEL 462 P C + DHRSGDV+CRGCGEVQAERLVD GAEWNRYDDNDGKGDPSRVGGELGG ASRIWGG+ +TGA+LANKKSRAQ KLEKVCMLLSD+ RSLHLDERV QVGFT+AD+A+TEG F+GK E+ LV A+LYL+CKHCGVLKSIAEVC++LG NKF+VGRVINDISRKVK+LEAVVFSPE+VVDKYGGQLRLPLGLRAAAV+VMK A+E+ G +G+HPQ+LAGAALLLLSNTK P LV+ G++K K+E + S +AL G +FPPP RS+ +VTGATL+ GT+K+AH+LLYEHRE++VP+ YAA+M SH LEL +EL Sbjct: 29 PPPCGRILFFPFPVDHRSGDVVCRGCGEVQAERLVDLGAEWNRYDDNDGKGDPSRVGGELGGVASRIWGGT------SASAPGGRGSQGMGKKRKGQGSAMTGAELANKKSRAQSKLEKVCMLLSDAVRSLHLDERVTQVGFTVADAANTEGAFRGKPENTLVGAILYLSCKHCGVLKSIAEVCAQLGLNKFDVGRVINDISRKVKSLEAVVFSPEDVVDKYGGQLRLPLGLRAAAVEVMKAAKEMPGLEGLHPQSLAGAALLLLSNTKVAPHLVLNSAAQEKGMMKIEVKDEDLAS----QALPG-LFPPPQRSLEDVTGATLMSTGTIKRAHSLLYEHREKLVPVAYAAQMFSHRLELRATSEL 383
BLAST of NO01G03770 vs. NCBI_GenBank
Match: XP_005854827.1 (tfiib zinc-binding family [Nannochloropsis gaditana CCMP526] >EKU21539.1 tfiib zinc-binding family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 357.1 bits (915), Expect = 8.400e-95 Identity = 186/266 (69.92%), Postives = 225/266 (84.59%), Query Frame = 0 Query: 204 LTGADLANKKSRAQGKLEKVCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVV-----ADGVVK---KEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPLVYAAEMASHLLELSPPTEL 462 +TGA+LANKKSRAQ KLEKVCMLLSD+ RSLHLDERV QVGFT+AD+A+TEG F+GKAE+ LV A+LYL+CKHCGVLKSIAEVC++LG NKF+VGRVINDISRKVK+LEAVVFSPE+VVDKYGGQLRLPLGLRAAAV+VMK A+E+ G +G+HPQ+LAGAALLLLSNTK P LV+ G++K K+E + S +AL G +FPPP RS+ +VTGATL+ GT+K+AH+LLYEHRE++VP+ YAA+M SH LEL +EL Sbjct: 1 MTGAELANKKSRAQSKLEKVCMLLSDAVRSLHLDERVTQVGFTVADAANTEGAFRGKAENTLVGAILYLSCKHCGVLKSIAEVCAQLGLNKFDVGRVINDISRKVKSLEAVVFSPEDVVDKYGGQLRLPLGLRAAAVEVMKAAKEMPGLEGLHPQSLAGAALLLLSNTKVAPHLVLNSAAEEKGMMKIEVKDEDLAS----QALPG-LFPPPQRSLEDVTGATLMSTGTIKRAHSLLYEHREKLVPVAYAAQMFSHRLELRATSEL 261
BLAST of NO01G03770 vs. NCBI_GenBank
Match: OAD05774.1 (hypothetical protein MUCCIDRAFT_151817 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 102.8 bits (255), Expect = 2.900e-18 Identity = 80/343 (23.32%), Postives = 145/343 (42.27%), Query Frame = 0 Query: 109 KCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRVGG---------ELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEKVCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPL 443 K R +++ + SGD++C CG V +R+VD +EW + +++G DPSRVG +L SR GGS + G L +K R + K ++ C S+ L V+ + E + +GK+ V++A + +AC+ GV ++ E+C+ K E+GR N + K+ PE++++++ LRLP+ ++ + VD+ +TA+++ G P ++A A + L++ K P RS ++ V T+K A+ LY +E+++ L Sbjct: 34 KIRPPNLVEEFASGDLVCGDCGLVLGDRIVDTRSEWRTFANDEG-DDPSRVGAASNPLLDGDQLDTIISRKDGGS---------------------GISKTLNKVQGKQLQHKGDRNMAAIYKD---ITAMCDSISLSRLVSDTAKQLYKRIEDEKLLRGKSNDVIIATCICIACRQEGVARTFREICALTRVPKKEIGRCCNALKTKIILTTTKGVVPEDLMNRFCSNLRLPMYVQKSGVDLARTAKDLGTLGGKSPISIAAACIYLVAYLCKQP---------------------------------RSTKDIANVAGVSEATIKAAYKALYAEKEKLIDL 318
BLAST of NO01G03770 vs. NCBI_GenBank
Match: XP_003115540.1 (hypothetical protein CRE_18811 [Caenorhabditis remanei] >EFP00028.1 hypothetical protein CRE_18811 [Caenorhabditis remanei] >POM31520.1 hypothetical protein FL81_16339, partial [Caenorhabditis remanei]) HSP 1 Score: 102.1 bits (253), Expect = 4.900e-18 Identity = 89/360 (24.72%), Postives = 147/360 (40.83%), Query Frame = 0 Query: 104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPLVYAAEMA 450 P C + +I DHR+GD++C CG V +RLVD G EW + + DPSRV GG+L + + +GGS + LAN + + ++ L+ + +HL + + F + GV +GK AA LY+AC+ GV ++ E+C+ +K E+GR I R LE V + + + ++ G L LP ++AAA + K A +++ G P ++A AA+ + S S +R A+ +G++ GA V T+++ + LLY + P + E A Sbjct: 4 PVQCPHHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNEKSGNDPSRVGAPESPYLSGGDLSTSIAVGFGGSD-----------------------------SDNTLANAQRKTMNNTDRQMTTAMNLIREMSERVHLPRNIQESAFRMFKEVLDSGVLRGKNIEAQAAACLYIACRQDGVPRTFKEICAISRVSKKEIGRCFKIIVRNSSTNLEHV--TSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRSPISIAAAAIYMASQA--------------------SAEKR----------TAKEIGDIAGAAEV---TIRQTYKLLYPKAAELFPEDFKFETA 299
BLAST of NO01G03770 vs. NCBI_GenBank
Match: ORY03902.1 (TFIIB-domain-containing protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 102.1 bits (253), Expect = 4.900e-18 Identity = 83/352 (23.58%), Postives = 152/352 (43.18%), Query Frame = 0 Query: 107 CTKCRS--LDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRA-----QGKLEKVCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPL 443 C +C++ +I+ + SGD++C CG V +R++D +EW + ++DG DPSRV G +L S+ GGS T DL+ + R+ + L + +S C ++ L + + + + E + +GK ++AA +++AC+ V ++ E+C+ K E+GR ++R V E+++ ++ L LP+ ++ AAVD+ K A+EV G P ++A A + L+SN ++P+ R + VTG + V T+K A+ LY +E+++ L Sbjct: 25 CKECKNPVPNIVEEFASGDLVCGDCGLVLGDRIIDTRSEWRTFANDDG-DDPSRVGAAANPLLSGSQLDTVISKTDGGSG-----------------------------TARDLSKIQGRSSAVKGERNLVQAYKEISAMCDAIGLPKLIGDIAKQLYKRVEDEKLLRGKPNESIIAACIFIACRQENVPRTFKEICALTQVPKKEIGRCFKALAR-VLETNVNTMGSEDLMSRFCSNLSLPMEVQKAAVDLTKKAKEVGTLAGKSPVSIAAACIYLISNLYQIPK------------------------------TTRDIAPVTGVSEV---TIKNAYRYLYNAKEQLIDL 312
BLAST of NO01G03770 vs. NCBI_GenBank
Match: GAN05796.1 (cyclin-like protein [Mucor ambiguus]) HSP 1 Score: 101.7 bits (252), Expect = 6.400e-18 Identity = 83/343 (24.20%), Postives = 145/343 (42.27%), Query Frame = 0 Query: 109 KCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRVGG---------ELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEKVCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPL 443 K R +++ + SGD++C CG V +R+VD +EW + +++G DPSRVG +L SR GGS + G L +K R + K ++ C S+ L V+ + E + +GK+ V++A + +AC+ GV ++ E+C+ K E+GR N + K+ VV PE++++++ LRLP ++ + VD+ +TA+ + G P ++A A + L+S K P RS ++ V T+K A+ LY +E+++ L Sbjct: 34 KIRPPNLVEEFASGDLVCGDCGLVLGDRIVDTRSEWRTFANDEG-DDPSRVGAASNPLLDGDQLDTIISRKDGGS---------------------GISKTLNKVQGKQLQHKGDRNMAAIYKD---ITAMCDSISLSRLVSDTAKQLYKRIEDEKLLRGKSNDVIIATCICIACRQEGVARTFREICALTRVPKKEIGRCCNALKTKILTTTNVV-EPEDLMNRFCSNLRLPNFVQKSGVDLARTAKHLGTLGGKSPISIAAACIYLVSYLCKDP---------------------------------RSTKDIANVAGVSEATIKAAYKALYAEKEKLIDL 317
BLAST of NO01G03770 vs. NCBI_GenBank
Match: ORY05960.1 (cyclin-like protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 101.7 bits (252), Expect = 6.400e-18 Identity = 85/365 (23.29%), Postives = 157/365 (43.01%), Query Frame = 0 Query: 94 HVLVNISAMNPETCTKCRS--LDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRA-----QGKLEKVCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKALEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPL 443 H +N+ M C +C++ +I+ + SGD++C CG V +R++D +EW + ++DG DPSRV G +L S+ GGS T DL+ + R+ + L + +S C ++ L + + + + E + +GK ++AA +++AC+ V ++ E+C+ K E+GR ++R V E+++ ++ L LP+ ++ AAVD+ K A+EV G P ++A A + L+SN ++P+ + + VTG + V T+K A+ LY +E+++ L Sbjct: 16 HPDLNVKIM----CKECKNPVPNIVEEFASGDLVCGDCGLVLGDRIIDTRSEWRTFANDDG-DDPSRVGAAANPLLSGSQLDTVISKTDGGSG-----------------------------TARDLSKIQGRSSAVKGERNLVQAYKEISAMCDAIGLPKLIGDIAKQLYKRVEDEKLLRGKPNESIIAACIFIACRQENVPRTFKEICALTQVPKKEIGRCFKALAR-VLETNVNTMGSEDLMSRFCSNLSLPMEVQRAAVDLTKRAKEVGTLAGKSPVSIAAACIYLISNLYQIPK------------------------------TTKDIAPVTGVSEV---TIKNAYKYLYNTKEQLIDL 312
BLAST of NO01G03770 vs. NCBI_GenBank
Match: OZF90080.1 (hypothetical protein FL82_13332, partial [Caenorhabditis remanei]) HSP 1 Score: 101.7 bits (252), Expect = 6.400e-18 Identity = 89/360 (24.72%), Postives = 148/360 (41.11%), Query Frame = 0 Query: 104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPLVYAAEMA 450 P C + +I DHR+GD++C CG V +RLVD G EW + + DPSRV GG+L + + +GGS + LAN + + ++ L+ + +HL + + F + GV +GK AA LY+AC+ GV ++ E+C+ +K E+GR I R LE V + + + ++ G L LP ++AAA + K A +++ G P ++A AA+ + S S +R A+ +G++ GA V T+++ + LLY + P + E+A Sbjct: 4 PVQCPHHPYVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNEKSGNDPSRVGAPESPYLSGGDLSTSIAVGFGGSD-----------------------------SDNTLANAQRKTMNNTDRQMTTAMNLIREMSERVHLPRNIQESAFRMFKEVHDSGVLRGKNIEAQAAACLYIACRQDGVPRTFKEICAISRVSKKEIGRCFKIIVRNSSTNLEHV--TSADFMSRFCGNLYLPNTIQAAATRIAKRAVDMDLVAGRSPISIAAAAIYMASQA--------------------SAEKR----------TAKEIGDIAGAAEV---TIRQTYKLLYPKAAELFPEDFKFEIA 299
BLAST of NO01G03770 vs. NCBI_GenBank
Match: EGT57002.1 (hypothetical protein CAEBREN_14440 [Caenorhabditis brenneri]) HSP 1 Score: 100.5 bits (249), Expect = 1.400e-17 Identity = 83/352 (23.58%), Postives = 143/352 (40.62%), Query Frame = 0 Query: 104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVP 442 P C + +I DHR+GD++C CG V +RLVD G EW + + DPSRV GG+L T + +GGS + LAN + ++ ++ L+ + +HL + + I +GK AA LY+AC+ GV ++ E+C+ +K E+GR I R ++ LE + + + + ++ G L LP ++AAA + K A +++ G P ++A AA+ + S + A+ +G+V GA + T+++ + LLY + + P Sbjct: 4 PVQCPVHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNERSGNDPSRVGAPENPLLSGGDLSTTIAVGFGGSD-----------------------------SDNSLANAQRKSMNNTDRQMTAAMSLIREMSERIHLPRNIQENASRIFKDVLDSRALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKEIGRCFKIIIRNLETNLEQI--TSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMASQASSEKR------------------------------SAKEIGDVAGAAEI---TVRQTYKLLYPKADELFP 291
BLAST of NO01G03770 vs. NCBI_GenBank
Match: OZG10380.1 (hypothetical protein FL83_15245, partial [Caenorhabditis latens]) HSP 1 Score: 100.5 bits (249), Expect = 1.400e-17 Identity = 88/360 (24.44%), Postives = 146/360 (40.56%), Query Frame = 0 Query: 104 PETCTKCRSLDIITDHRSGDVICRGCGEVQAERLVDEGAEWNRYDDNDGKGDPSRV---------GGELGGTASRIWGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGADLANKKSRAQGKLEK----VCMLLSDSCRSLHLDERVAQVGFTIADSASTEGVFKGKAESVLVAAVLYLACKHCGVLKSIAEVCSELGTNKFEVGRVINDISRKVKA-LEAVVFSPEEVVDKYGGQLRLPLGLRAAAVDVMKTAREVEGFQGMHPQTLAGAALLLLSNTKKMPQLVVADGVVKKEEGIKSGGQREALAGTVFPPPARSVGEVTGATLVGVGTMKKAHALLYEHRERVVPLVYAAEMA 450 P C + +I DHR+GD++C CG V +RLVD G EW + + DPSRV GG+L + + +GGS + LAN + + ++ L+ + +HL + + F + GV +GK AA LY+ C+ GV ++ E+C+ +K E+GR I R LE V + + + ++ G L LP ++AAA + K A +++ G P ++A AA+ + S S +R A+ +G++ GA V T+++ + LLY + P + E A Sbjct: 4 PVQCPHHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNEKSGNDPSRVGAPESPYLSGGDLSTSIAVGFGGSD-----------------------------SDNTLANAQRKTMNNTDRQMTTAMNLIREMSERVHLPRNIQESAFRMFKEVLDSGVLRGKNIEAQAAACLYIVCRQDGVPRTFKEICAISRVSKKEIGRCFKIIVRNSSTNLEHV--TSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRSPISIAAAAIYMASQA--------------------SAEKR----------TAKEIGDIAGAAEV---TIRQTYKLLYPKAAELFPEDFKFETA 299 The following BLAST results are available for this feature:
BLAST of NO01G03770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03770 ID=NO01G03770|Name=NO01G03770|organism=Nannochloropsis oceanica|type=gene|length=3301bpback to top protein sequence of NO01G03770.2 >NO01G03770.2-protein ID=NO01G03770.2-protein|Name=NO01G03770.2|organism=Nannochloropsis oceanica|type=polypeptide|length=385bpback to top protein sequence of NO01G03770.1 >NO01G03770.1-protein ID=NO01G03770.1-protein|Name=NO01G03770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bpback to top Synonyms
Publications
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