NO01G03570, NO01G03570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03570 vs. NCBI_GenBank
Match: XP_019038879.1 (hypothetical protein WICANDRAFT_41867 [Wickerhamomyces anomalus NRRL Y-366-8] >ODQ59672.1 hypothetical protein WICANDRAFT_41867 [Wickerhamomyces anomalus NRRL Y-366-8]) HSP 1 Score: 87.8 bits (216), Expect = 6.100e-14 Identity = 65/212 (30.66%), Postives = 108/212 (50.94%), Query Frame = 0 Query: 19 QVIAQVADCFIVIRCD---DMLCIWDQHALHERIRVESFLRNVNLPQQQIIRQSMKPFKPLVFP------NYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTR--PIIVEEPLPDVTELLPALLRDLRDIQ--------SRPGADPMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLL 212 +V++QV FI+++ + L I DQHA ERI+VE +L+ + I + PF L + ++LE +A LN + + + L +V T +++ + D+ L L + L D+ S+ +QA+P + D+++SKACR AIMF KL+ C++++ E+S PF CAHGRPS++P+C L Sbjct: 431 EVVSQVDTKFILVKMNKPRSRLFIIDQHACDERIKVERYLK-------EFIEAAQDPFHDLSIKLGENQFDLKFNNLETELLHQYKAQLNTWGIRYVLNTENVATITHLPDLLIPKLDSDLAFLKKCLAQHLYDLHNKSKLKSLSKDWWSSLQAVPTILIDLINSKACRSAIMFGKKLTVNECEQMIKELSKCKSPFQCAHGRPSIIPICEL 635
BLAST of NO01G03570 vs. NCBI_GenBank
Match: EEQ41827.1 (conserved hypothetical protein [Candida albicans WO-1]) HSP 1 Score: 87.4 bits (215), Expect = 7.900e-14 Identity = 70/207 (33.82%), Postives = 105/207 (50.72%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTRPIIVEEPLPDVTELL-PALLR---DLRDIQSR--PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPL 209 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + V++ P+I+ + D E L +LL+ DL D R P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ Sbjct: 409 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFDVHAS---ELMLFDQYAANFNSFGICYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPI 607
BLAST of NO01G03570 vs. NCBI_GenBank
Match: XP_715055.1 (mismatch repair protein [Candida albicans SC5314] >KGQ97584.1 DNA mismatch repair protein MLH3 [Candida albicans P37005] >KGR14650.1 DNA mismatch repair protein MLH3 [Candida albicans P57072] >KGR16716.1 DNA mismatch repair protein MLH3 [Candida albicans P78048] >KGT71877.1 DNA mismatch repair protein MLH3 [Candida albicans 12C] >KGU16994.1 DNA mismatch repair protein MLH3 [Candida albicans 19F] >KGU17360.1 DNA mismatch repair protein MLH3 [Candida albicans L26] >KHC41426.1 DNA mismatch repair protein MLH3 [Candida albicans P76055] >KHC60726.1 DNA mismatch repair protein MLH3 [Candida albicans P37039] >KHC66977.1 DNA mismatch repair protein MLH3 [Candida albicans P75010] >KHC84167.1 DNA mismatch repair protein MLH3 [Candida albicans SC5314] >KHC88855.1 DNA mismatch repair protein MLH3 [Candida albicans SC5314] >AOW27039.1 mismatch repair protein [Candida albicans SC5314]) HSP 1 Score: 87.4 bits (215), Expect = 7.900e-14 Identity = 71/210 (33.81%), Postives = 106/210 (50.48%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTRPIIVEEPLPDVTELL-PALLR---DLRDIQSR--PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLL 212 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + V++ P+I+ + D E L +LL+ DL D R P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ L Sbjct: 434 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFGVHAS---ELMLFDQYAANFNSFGICYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPIANL 635
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KGR23061.1 (DNA mismatch repair protein MLH3 [Candida albicans P37037]) HSP 1 Score: 87.4 bits (215), Expect = 7.900e-14 Identity = 71/210 (33.81%), Postives = 106/210 (50.48%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTRPIIVEEPLPDVTELL-PALLR---DLRDIQSR--PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLL 212 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + V++ P+I+ + D E L +LL+ DL D R P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ L Sbjct: 434 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFGVHAS---ELMLFDQYAANFNSFGICYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPIANL 635
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KGU30641.1 (DNA mismatch repair protein MLH3 [Candida albicans P34048] >KHC84819.1 DNA mismatch repair protein MLH3 [Candida albicans P78042]) HSP 1 Score: 87.4 bits (215), Expect = 7.900e-14 Identity = 70/207 (33.82%), Postives = 105/207 (50.72%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTRPIIVEEPLPDVTELL-PALLR---DLRDIQSR--PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPL 209 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + V++ P+I+ + D E L +LL+ DL D R P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ Sbjct: 409 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFDVHAS---ELMLFDQYAANFNSFGICYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPI 607
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KGU37215.1 (DNA mismatch repair protein MLH3 [Candida albicans P57055]) HSP 1 Score: 87.4 bits (215), Expect = 7.900e-14 Identity = 70/207 (33.82%), Postives = 105/207 (50.72%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTRPIIVEEPLPDVTELL-PALLR---DLRDIQSR--PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPL 209 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + V++ P+I+ + D E L +LL+ DL D R P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ Sbjct: 409 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFDVHAS---ELMLFDQYAANFNSFGICYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPI 607
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KGQ91076.1 (DNA mismatch repair protein MLH3 [Candida albicans P94015]) HSP 1 Score: 87.0 bits (214), Expect = 1.000e-13 Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTR-PIIVEEPLPDVTELL-PALLR---DLRDIQSR--PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLL 212 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + T+ +V T P+I+ + D E L +LL+ DL D R P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ L Sbjct: 409 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFDVHAS---ELMLFDQYAANFNSFGICYYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPIANL 611
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KGR02192.1 (DNA mismatch repair protein MLH3 [Candida albicans GC75] >KGU34787.1 DNA mismatch repair protein MLH3 [Candida albicans P75063] >KHC47439.1 DNA mismatch repair protein MLH3 [Candida albicans Ca6]) HSP 1 Score: 87.0 bits (214), Expect = 1.000e-13 Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTR-PIIVEEPLPDVTELL-PALLR---DLRDIQSR--PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLL 212 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + T+ +V T P+I+ + D E L +LL+ DL D R P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ L Sbjct: 409 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFDVHAS---ELMLFDQYAANFNSFGICYYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPIANL 611
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KGU13664.1 (DNA mismatch repair protein MLH3 [Candida albicans P87] >KHC74720.1 DNA mismatch repair protein MLH3 [Candida albicans P75016]) HSP 1 Score: 87.0 bits (214), Expect = 1.000e-13 Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTR-PIIVEEPLPDVTELL-PALLR---DLRDIQSR--PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLL 212 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + T+ +V T P+I+ + D E L +LL+ DL D R P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ L Sbjct: 409 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFDVHAS---ELMLFDQYAANFNSFGICYYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPIANL 611
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KHC56388.1 (DNA mismatch repair protein MLH3 [Candida albicans P60002]) HSP 1 Score: 86.7 bits (213), Expect = 1.400e-13 Identity = 70/211 (33.18%), Postives = 106/211 (50.24%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTR-PIIVEEPLPDVTELL-PALLRDLRDIQSR-----PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLL 212 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + T+ +V T P+I+ + D E L +LL+ D+ P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ L Sbjct: 409 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFDVHAS---ELMLFDQYAANFNSFGICYYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKSISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPIANL 611 The following BLAST results are available for this feature:
BLAST of NO01G03570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03570 ID=NO01G03570|Name=NO01G03570|organism=Nannochloropsis oceanica|type=gene|length=1221bpback to top protein sequence of NO01G03570.1 >NO01G03570.1-protein ID=NO01G03570.1-protein|Name=NO01G03570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=295bpback to top Synonyms
Publications
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