NO01G03570, NO01G03570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03570 vs. NCBI_GenBank
Match: XP_023019553.1 (uncharacterized protein LOC111508326 [Leptinotarsa decemlineata]) HSP 1 Score: 92.8 bits (229), Expect = 1.900e-15 Identity = 58/202 (28.71%), Postives = 106/202 (52.48%), Query Frame = 0 Query: 19 QVIAQVADCFIVI--RCDDMLCIWDQHALHERIRVESFLRNVNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTRPIIVEEPLP------DVTELLPALLRDLRDIQSRPGADPMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLLD 213 +VI QV FI + R ++L ++DQHA+HERIR+E L+ I +++ + P +DL+LL+K ++LN L + + V P+ + + + +++ L++++ D+ + LP +++I++ +ACRG+I F L++ C LL ++S+ PF CAHGRP++ P+ LD Sbjct: 1186 EVIGQVDKKFIAVLDRESNLLILFDQHAVHERIRLEKLLK--------IYKEAKSELAEKLLFFIPENDLQLLKK--RESYLNFLGLSVEFFTNGINVIQVPLSLYSKIKHNNFSGTLNKMIHQLVKEIIDLLKSTRGASISTLPKLLQNIINMEACRGSIKFGDVLTKNKCAELLEKLSTCDLPFQCAHGRPTLTPVLALD 1377
BLAST of NO01G03570 vs. NCBI_GenBank
Match: ODN04018.1 (DNA mismatch repair protein Mlh3 [Orchesella cincta]) HSP 1 Score: 92.0 bits (227), Expect = 3.200e-15 Identity = 70/202 (34.65%), Postives = 103/202 (50.99%), Query Frame = 0 Query: 36 MLCIWDQHALHERIRVESFLRN--VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLI-KTSVLVRTRP-----IIVEEPLPDVTELLPALLRDLRDIQ------SRPGADPMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLLDHAAGGSPLSSS 224 M+ +DQHA+HERIR+E F+ VN + +SM P F N ++ LL+ T F N+ L FQ I T + ++ P EPL +L L+ +L Q ++ G+ +P + ++L S+AC GAI F +L TCK+L+ ++ PF CAHGRPSVVPL +D+ + PLS S Sbjct: 997 MIVAFDQHAVHERIRLEKFVEESFVNPKGVKKYLKSMGIMPPYKF-NMSETEVRLLQ--TFEDFFNQNGLKFQPISSTCIKIKGVPKCFGERAATEPLASREQLFRGLIFNLIQEQIHHIRETKKGS--FTTMPKAVFEVLCSQACHGAIKFGDELDMDTCKQLISDLKQCKTPFQCAHGRPSVVPLTYVDNFSKTHPLSHS 1193
BLAST of NO01G03570 vs. NCBI_GenBank
Match: XP_023310542.1 (LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3-like [Anoplophora glabripennis]) HSP 1 Score: 91.7 bits (226), Expect = 4.200e-15 Identity = 63/195 (32.31%), Postives = 106/195 (54.36%), Query Frame = 0 Query: 20 VIAQVADCFIVI--RCDDMLCIWDQHALHERIRVESFLRNVNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTRPIIVEEPLPDVTELLPALLRDLRDIQSRPGADPMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLLD 213 VI Q+ FIV+ ++ ++DQHA+HERIR+E L++ + + R K +VF + +DL LLRK +LN L + + + + P+ + D + ++ L++++ ++ + LP I++IL+ +ACRGAI F KLS C+ +L ++S PF CAHGRP++VPL L+ Sbjct: 554 VIGQLDKKFIVVVEETKHLVILFDQHAVHERIRLEDLLKSYSNAKISCHRD-----KFIVFLSC--NDLSLLRK--HEEYLNFLGLFVEFFEDGINIVDIPLCLHNKFKD-SVMIQLLIKEIIELVKDTRGVTFKNLPKIIQNILNLEACRGAIKFGDKLSNNDCEEVLKKLSICDLPFQCAHGRPTLVPLITLN 738
BLAST of NO01G03570 vs. NCBI_GenBank
Match: CEP22496.1 (MLH3 [Cyberlindnera jadinii]) HSP 1 Score: 90.5 bits (223), Expect = 9.400e-15 Identity = 70/208 (33.65%), Postives = 104/208 (50.00%), Query Frame = 0 Query: 20 VIAQVADCFIVI--RCDDMLCIWDQHALHERIRVESFLRNVNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKT-----SVLVRTRPIIVEEPLPDVTE-LLPALLRDLRDIQSRPGADP----------MQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLC 210 VIAQV D FI+I + + L I DQHA ERIRVE + + Q + P K V + P LELL T L + + F ++ +V P ++ + D ++ ++++ D+Q + MQA+P + +L+SKACR AIMF LS+F C+ L+ +++ PF CAHGRPSV+PLC Sbjct: 486 VIAQVDDKFILIKSKVEPKLYIVDQHACDERIRVEELYKQLIEMASQSTQSLAVPLKTNVSADAPLGALELLN--TYSKELENWGIKFTTARSNNESGNVTFTHLPELMHCKVDDDNSFVVRSIMQYAHDLQDKVKLTSLNRHQDWFLNMQAMPTILTLLLNSKACRSAIMFGQTLSKFECQLLVQKLAQCKQPFQCAHGRPSVIPLC 691
BLAST of NO01G03570 vs. NCBI_GenBank
Match: XP_020072391.1 (hypothetical protein CYBJADRAFT_166096 [Cyberlindnera jadinii NRRL Y-1542] >ODV75352.1 hypothetical protein CYBJADRAFT_166096 [Cyberlindnera jadinii NRRL Y-1542]) HSP 1 Score: 90.5 bits (223), Expect = 9.400e-15 Identity = 70/208 (33.65%), Postives = 104/208 (50.00%), Query Frame = 0 Query: 20 VIAQVADCFIVI--RCDDMLCIWDQHALHERIRVESFLRNVNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKT-----SVLVRTRPIIVEEPLPDVTE-LLPALLRDLRDIQSRPGADP----------MQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLC 210 VIAQV D FI+I + + L I DQHA ERIRVE + + Q + P K V + P LELL T L + + F ++ +V P ++ + D ++ ++++ D+Q + MQA+P + +L+SKACR AIMF LS+F C+ L+ +++ PF CAHGRPSV+PLC Sbjct: 446 VIAQVDDKFILIKSKVEPKLYIVDQHACDERIRVEELYKQLIEMASQSTQSLAVPLKTNVSADAPLGALELLN--TYSKELENWGIKFTTARSNNESGNVTFTHLPELMHCKVDDDNSFVVRSIMQYAHDLQDKVKLTSLNRHQDWFLNMQAMPTILTLLLNSKACRSAIMFGQTLSKFECQLLVQKLAQCKQPFQCAHGRPSVIPLC 651
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KHJ32947.1 (putative dna mismatch repair protein [Erysiphe necator]) HSP 1 Score: 90.1 bits (222), Expect = 1.200e-14 Identity = 77/251 (30.68%), Postives = 119/251 (47.41%), Query Frame = 0 Query: 7 RIHKNMLSQGRTQVIAQVADCFIVI------------RCDDMLCIWDQHALHERIRVESFLRNVNLPQQQIIRQSMKPF--------KPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQL-----------IKTSVLVRTRPIIVEEPLPDVTELLPALLR-------DLRD--------IQSRPGADPMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLL 212 RI K L + I+QV + FI + R +D+L + DQHA ERIR+ES L + P +I + P+ +PL+ + PP+++ELL T R + + ++L +++V + P ++ E LL +LLR D D S D + P + D+L+++ACR AIMF+ +LS C+ L+ ++ SFPF CAHGRPS+VPL L Sbjct: 702 RISKRALKDAK--FISQVDNKFIFVKVFTTDCKELAQRSEDLLVMIDQHAADERIRIESLLEELCTP--AMITEVDSPYRVKSYILMRPLII-SLPPNEIELLF--TYRNYFLSWGFSYKLPAHGSVSNQTNNNQTLIVLSLPPVIAERCQQQPHLLSSLLRKEICKLQDSNDNLQVLSTFSSSTSWLDRIHTCPVGVLDLLNTRACRSAIMFNDELSEEQCRILVKRLAECSFPFMCAHGRPSMVPLAKL 945
BLAST of NO01G03570 vs. NCBI_GenBank
Match: XP_002417975.1 (DNA mismatch repair protein (mutL homologue), putative [Candida dubliniensis CD36] >CAX45694.1 DNA mismatch repair protein (mutL homologue), putative [Candida dubliniensis CD36]) HSP 1 Score: 88.6 bits (218), Expect = 3.600e-14 Identity = 67/219 (30.59%), Postives = 106/219 (48.40%), Query Frame = 0 Query: 5 SLRIHKNMLSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFL------RNVNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTRPIIVEEPLPDVTELLPALLR---DLRDIQSRPGAD------PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPL 209 +L + L+ GR +VI Q+ FI++ D + + DQHA ERIRVE +L R+ L Q + + P + ++F Y P+ N F + F V++ P ++ + D+ L +LL+ DL D R D LP I ++++SKACR AIMF L++ +++ ++S PF CAHGRPS+VP+ Sbjct: 388 NLSFSREDLAPGRFKVINQIDRKFILLTIADQIVVLDQHASDERIRVEQYLQEFVEQRHPGLRLQNPVTFILHPSETVLFDQYAPN-------------FNTFGIHFATQSDRVVITHLPFLLTKIENDL--LKDSLLQHCYDLADHVKRVHIDCNNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMYQIVTKLSQCKLPFQCAHGRPSIVPI 591
BLAST of NO01G03570 vs. NCBI_GenBank
Match: AEH59228.1 (MLH3, partial [Oidiodendron maius]) HSP 1 Score: 87.8 bits (216), Expect = 6.100e-14 Identity = 76/256 (29.69%), Postives = 119/256 (46.48%), Query Frame = 0 Query: 1 MSGRSLRIHKNMLSQGRTQVIAQVADCFIVIRCDD--------------MLCIWDQHALHERIRVESFLRNVNLPQQQIIR-----QSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLI------------KTSVLVRTRPIIVEEPLPDVTELLPALLRD----LRDIQSRPGADPM-------------QALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPL 209 +SG S RI K L +VI+QV +I+I+ + +L + DQHA ERIR+E ++ + PQQ I Q + KPL +Y E+ R + + + + + +V+++ P ++ E +LL L+R L D P A M ++ P I D+L+S+ACR AIMF+ +LS+ C+RL+ ++ +FPF CAHGRPS+VPL Sbjct: 16 VSGTSWRISKGALR--NAEVISQVDKKYILIKLNSLNYEAEAGENIQGPLLVVIDQHAADERIRIERLMQELCSPQQPNISGDSGVQGIHLEKPL---SYIVSKKEINLLQNHRNHFSDWGISYDISAKVTTTNGEDHGSQTVIIKCLPPVISERCKANPKLLIDLIRTEIWRLHDHGDTPRAATMLDAQENHSWVAKIRSCPQGIIDMLNSRACRSAIMFNDELSKEQCQRLISRLAECAFPFQCAHGRPSIVPL 266
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KHC42098.1 (DNA mismatch repair protein MLH3 [Candida albicans P76067]) HSP 1 Score: 87.8 bits (216), Expect = 6.100e-14 Identity = 71/210 (33.81%), Postives = 106/210 (50.48%), Query Frame = 0 Query: 13 LSQGRTQVIAQVADCFIVIRCDDMLCIWDQHALHERIRVESFLRN-VNLPQQQIIRQSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLIKTSVLVRTRPIIVEEPLPDVTELL-PALLR---DLRDIQSR--PGAD----PMQALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPLCLL 212 L+ + +VI QV FI++ DD L + DQHA ERIRVE +L+ V+ P ++ P+ F + EL+ A N F + + V++ P+I+ + D E L +LL+ DL D R P D LP I ++++SKACR AIMF L++ + L+ ++S PF CAHGRPS+VP+ L Sbjct: 409 LAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQP-----NPGLRLHSPIAFDVHAS---ELMLFDQYAANFNSFGICYTTDTAQVVITHLPLILLTKVEDDAEFLKDSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPFQCAHGRPSIVPIANL 610
BLAST of NO01G03570 vs. NCBI_GenBank
Match: KIM95242.1 (hypothetical protein OIDMADRAFT_134029 [Oidiodendron maius Zn]) HSP 1 Score: 87.8 bits (216), Expect = 6.100e-14 Identity = 76/256 (29.69%), Postives = 119/256 (46.48%), Query Frame = 0 Query: 1 MSGRSLRIHKNMLSQGRTQVIAQVADCFIVIRCDD--------------MLCIWDQHALHERIRVESFLRNVNLPQQQIIR-----QSMKPFKPLVFPNYPPDDLELLRKPTTRAFLNRFCLDFQLI------------KTSVLVRTRPIIVEEPLPDVTELLPALLRD----LRDIQSRPGADPM-------------QALPPCIRDILSSKACRGAIMFHTKLSRFTCKRLLIEISSTSFPFNCAHGRPSVVPL 209 +SG S RI K L +VI+QV +I+I+ + +L + DQHA ERIR+E ++ + PQQ I Q + KPL +Y E+ R + + + + + +V+++ P ++ E +LL L+R L D P A M ++ P I D+L+S+ACR AIMF+ +LS+ C+RL+ ++ +FPF CAHGRPS+VPL Sbjct: 654 VSGTSWRISKGALR--NAEVISQVDKKYILIKLNSLNYEAEAGENIQGPLLVVIDQHAADERIRIERLMQELCSPQQPNISGDSGVQGIHLEKPL---SYIVSKKEINLLQNHRNHFSDWGISYDISAKVTTTNGEDHGSQTVIIKCLPPVISERCKANPKLLIDLIRTEIWRLHDHGDTPRAATMLDAQENHSWVAKIRSCPQGIIDMLNSRACRSAIMFNDELSKEQCQRLISRLAECAFPFQCAHGRPSIVPL 904 The following BLAST results are available for this feature:
BLAST of NO01G03570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03570 ID=NO01G03570|Name=NO01G03570|organism=Nannochloropsis oceanica|type=gene|length=1221bpback to top protein sequence of NO01G03570.1 >NO01G03570.1-protein ID=NO01G03570.1-protein|Name=NO01G03570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=295bpback to top Synonyms
Publications
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