NO01G03210, NO01G03210 (gene) Nannochloropsis oceanica

Overview
NameNO01G03210
Unique NameNO01G03210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1457
Alignment locationchr1:844131..845587 +

Link to JBrowse

Properties
Property NameValue
DescriptionAcyl-CoA N-acyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:844131..845587 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016407acetyltransferase activity
GO:0016746transferase activity, transferring acyl groups
GO:0016740transferase activity
GO:0016407acetyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0007062sister chromatid cohesion
GO:0000070mitotic sister chromatid segregation
GO:0045132meiotic chromosome segregation
GO:0045132meiotic chromosome segregation
GO:0007062sister chromatid cohesion
GO:0000070mitotic sister chromatid segregation
Vocabulary: INTERPRO
TermDefinition
IPR033257Eco1/CTF7
IPR028009ESCO_Acetyltransf_dom
IPR028005AcTrfase_ESCO_Znf_dom
Homology
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: EWM29255.1 (Acyl-CoA N-acyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 313.9 bits (803), Expect = 6.600e-82
Identity = 190/393 (48.35%), Postives = 229/393 (58.27%), Query Frame = 0 
Query:    3 RGSSSVFGSLTGCLRNGNKAKKRPPSSSSA--------SFANRAVAASKKAPTQTFLDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKGQRLVWGAEGKD-RVIEVRPGDGGPQLLKMGEVKRVMDQEMGFVPLVEGQSALRPTEKAFLYVHDKRVVGCLVAEKIVAAHPVLEAMPSEEW-----------EGRETTAEELVHGAK----DGRLQECGGKKACKDHAGAENDKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKGKALAPPSSQFRQGRKGKEEAAASLLPKGVAYSLHDMAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQLSNAGYSFARSYTEGGGALLVY 372
            R + S FG L  C    +  K RP  ++S+        S +  +  A KK  TQT+LD GQ+S GKRTLCG CGLLYVNG+ EDEKDH  FCRS++AGLV  GW+ QRLVWG EG D RVIEVRPGDG   L KM EVKRVMDQEMGFVPL EG   L+ TEKAFLYVH +RVVGC++AEKI  AHPV   +PS+E            + R +   + +HG +    +GR+    G+    D                                            GK  A      R   K +     S+LP+GV Y LH+  EA +G+KQVWVS+N RR+GIA+ MLEVARARF+YGFVVPR KVAFSQLS AGYSFAR+Y +  G LLVY
Sbjct:    2 RDAMSAFGILKDCFSGRHTKKIRPAYAASSDSRVSSWTSTSKASPHAPKKTLTQTYLDLGQRSHGKRTLCGTCGLLYVNGQEEDEKDHVKFCRSVAAGLVCPGWRDQRLVWGQEGVDGRVIEVRPGDGAAPLTKMREVKRVMDQEMGFVPLREGDIVLKTTEKAFLYVHGRRVVGCVIAEKINVAHPVSGTIPSKEGSHVCGMQKRSRDSRVSGIADSLHGGEGEGPEGRVPAASGQNEHTDSMQT--------------------------------------ATGKMAASTGGVLRHADKSR--VGLSMLPQGVEY-LHEKVEAAIGIKQVWVSQNMRRQGIAKRMLEVARARFFYGFVVPRGKVAFSQLSTAGYSFARAYVK-PGKLLVY 352
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: XP_005852573.1 (hypothetical protein NGA_0369920, partial [Nannochloropsis gaditana CCMP526] >EKU23258.1 hypothetical protein NGA_0369920, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 164.9 bits (416), Expect = 4.900e-37
Identity = 88/149 (59.06%), Postives = 101/149 (67.79%), Query Frame = 0 
Query:    3 RGSSSVFGSLTGCLRNGNKAKKRPPSSSSA--------SFANRAVAASKKAPTQTFLDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKGQRLVWGAEGKD-RVIEVRPGDGGPQLLKMGEVKRVMDQEMGFV 143
            R + S FG L  C    +  K RP  ++S+        S +  +  A KK  TQT+LD GQ+S GKRTLCG CGLLYVNG+ EDEKDH  FCRS++AGLV  GW+ QRLVWG EG D RVIEVRPGDG   L KM EVKRVMDQEMGFV
Sbjct:    2 RDAMSAFGILKDCFSGRHTKKIRPAYAASSDSRVSSWTSTSKASPHAPKKTLTQTYLDLGQRSHGKRTLCGTCGLLYVNGQEEDEKDHVKFCRSVAAGLVCPGWRDQRLVWGQEGVDGRVIEVRPGDGAAPLTKMREVKRVMDQEMGFV 150
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: XP_002902720.1 (N-acetyltransferase, putative [Phytophthora infestans T30-4] >EEY56646.1 N-acetyltransferase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 124.4 bits (311), Expect = 7.400e-25
Identity = 96/345 (27.83%), Postives = 144/345 (41.74%), Query Frame = 0 
Query:   27 PSSSSASFANRAVAASKKAP-TQTFLDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKGQR-LVWGAEGKDRVIEVRPGDGGPQLLKMGEVKRVMDQEMGFVPLVEGQSALRPTEKAFLYVHDKRVVGCLVAEKIVAAHPVLEAMPSEEWEGRETTAEELVHGAKDGRLQECGGKKACKDHAGAENDKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKGKALAPPSSQFRQGRKGKEEAAASLLPKGVAYSLHDMAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQLSNAGYSFARSYTEGGGALL 370
            P   +A+     ++ SK  P TQ+++D GQ+S GK   C  CGLLY  GE EDEK+H  FC+ +  G+ F  WK +R L   ++ K R++E+R  D    + K+ E+K V+D  +GFV   E     RPT   F+Y+ D++VVGC+  E+I  A  +            + TA  LV                                                                              K  E + AS   +G   +  D   A +G+ Q+WV  + RRK IA  M++V R +  YG  V + ++AF+Q +  G  FA+ Y E    L+
Sbjct:   63 PEPKAATCVKELMSPSKALPSTQSYIDVGQRSFGKLVTCSKCGLLYTAGEEEDEKEHQKFCKRMKRGVTFSKWKKERVLKTVSDTKARILEIRGEDPSSHVKKLLEIKEVLDDALGFVE--EKVFLQRPT---FVYIQDRQVVGCINTERISEAFTL------------DKTASNLV-----------------------------------------------------------------------------TKDDENSVAS---EGAVTASIDSRSAVVGICQLWVHPSFRRKNIATRMVDVVREKSIYGMHVAKDQIAFAQPTRNGLQFAQKYMEPAEVLI 310
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: POM73226.1 (N-acetyltransferase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 118.2 bits (295), Expect = 5.300e-23
Identity = 90/345 (26.09%), Postives = 143/345 (41.45%), Query Frame = 0 
Query:   27 PSSSSASFANRAVAASK-KAPTQTFLDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKGQR-LVWGAEGKDRVIEVRPGDGGPQLLKMGEVKRVMDQEMGFVPLVEGQSALRPTEKAFLYVHDKRVVGCLVAEKIVAAHPVLEAMPSEEWEGRETTAEELVHGAKDGRLQECGGKKACKDHAGAENDKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKGKALAPPSSQFRQGRKGKEEAAASLLPKGVAYSLHDMAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQLSNAGYSFARSYTEGGGALL 370
            P   + +FA + ++ SK  A TQ+++D GQ+S GK   C  CGLLY  GE EDEK+H  FCR +  G+ F  WK +R L   ++ + R++E+R  D    + K+ E+K V+D  +GF   VE ++ L+     F+Y+   +VVGC+  E+I  A  +            + +A  LV                                                                              +   E  +S+   G   +  D   A +G+ Q+WV  + RRK IA  M+++ R +  YG  V +  VAF+Q +  G  FA+ Y +    L+
Sbjct:   62 PEPKATTFAKKLMSPSKAHASTQSYIDVGQRSFGKHVTCSKCGLLYTAGEEEDEKEHQKFCRRMKRGVTFSKWKTERVLKTFSDTRARILEIRGDDPTAHVKKLLEIKAVLDDALGF---VEKETFLQ--RNNFIYIQYHQVVGCVNIERITKAFTL------------DKSASNLV-----------------------------------------------------------------------------AQTNSEEESSVAADGAVTASSDSKPAVIGICQLWVHPSFRRKSIATRMVDLVREKSIYGMFVTKNLVAFAQPTRNGLQFAQKYMQPSEVLI 312
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: XP_005852574.1 (n-acetyltransferase esco2 [Nannochloropsis gaditana CCMP526] >EKU23259.1 n-acetyltransferase esco2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 117.9 bits (294), Expect = 6.900e-23
Identity = 65/107 (60.75%), Postives = 77/107 (71.96%), Query Frame = 0 
Query:  265 GKALAPPSSQFRQGRKGKEEAAASLLPKGVAYSLHDMAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQLSNAGYSFARSYTEGGGALLVY 372
            GK  A      R   K +     S+LP+GV Y LH+  EA +G+KQVWVS+N RR+GIA+ MLEVARARF+YGFVVPR KVAFSQLS AGYSFAR+Y +  G LLVY
Sbjct:    6 GKMAASTGGVLRHADKSR--VGLSMLPQGVEY-LHEKVEAAIGIKQVWVSQNMRRQGIAKRMLEVARARFFYGFVVPRGKVAFSQLSTAGYSFARAYVK-PGKLLVY 108
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: XP_009531392.1 (hypothetical protein PHYSODRAFT_511827 [Phytophthora sojae] >EGZ13963.1 hypothetical protein PHYSODRAFT_511827 [Phytophthora sojae])

HSP 1 Score: 117.5 bits (293), Expect = 9.000e-23
Identity = 93/338 (27.51%), Postives = 144/338 (42.60%), Query Frame = 0 
Query:   28 SSSSASFANRAVAASKKAP-TQTFLDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKGQRLVWG-AEGKDRVIEVRPGDGGPQLLKMGEVKRVMDQEMGFVPLVEGQSALRPTEKAFLYVHDKRVVGCLVAEKIVAAHPVLEAMPSEEWEGRETTAEELVHGAKDGRLQECGGKKACKDHAGAENDKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKGKALAPPSSQFRQGRKGKEEAAASLLPKGVAYSLHDMAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQLSNAGYSFARSYTE 364
            +++S+   N  ++ SK  P TQ+++D GQ+S GK   C  CGLLY  GE EDEK+H  FC+ +  G+ F  WK +R++    +   R++E+R  D    + K+ EVK V+D  +GF   VE ++ LR +   F+Y+   +VVGC+  E+I  A  +            + +A  LV                        +DK+                               G  +G   A  +SQ                             A +G+ Q+WV  + RRK IA  M++V R +  YG  V +  VAF+Q +  G  FA+ Y E
Sbjct:   69 AAASSKCTNALLSPSKSLPSTQSYIDVGQRSFGKHVTCPTCGLLYTAGEEEDEKEHQKFCKRMKRGITFSKWKTERMLRSFPDTGARILEIRGDDPTSHVKKLLEVKAVLDDALGF---VEEEAFLRRSH--FVYIQKHKVVGCVNTERITEAFTL------------DKSASNLVVQTN-------------------SDDKE-----------------------------SSGSVEGAITASATSQ----------------------------PALVGICQLWVHPSVRRKSIATRMVDVVREKSIYGMCVAKNLVAFAQPTRNGLQFAQQYME 313
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: EJK62222.1 (hypothetical protein THAOC_17173, partial [Thalassiosira oceanica])

HSP 1 Score: 115.9 bits (289), Expect = 2.600e-22
Identity = 95/354 (26.84%), Postives = 141/354 (39.83%), Query Frame = 0 
Query:   20 NKAKKRPPSSSSASFANRAVAASK--KAPTQTFLDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKGQRLVWGAEGKDRVIEVRPGDGGPQLLKMGEVKRVMDQEMGFVPLVEGQSALRPTEKAFLYVHDKRVVGCLVAEKIVAAHPVLEAMPSEEWEGRETTAEELVHGAKDGRLQECGGKKACKDHAGAENDKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKGKALAPPSSQFRQGRKGKEEAAASLLPKGVAYSLHDMAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQLSNAGYSFARSYTEGGGALLVY 372
            NK K R P+SS     +    A+K  K   Q FLDFGQKS GK+++C  CG+L++    ED K H   C+    G+V  GWK +R V      +R++E+RPGD      K+ +VK ++D+ MGF      +         +LY+  +RVVG LV ++I  A+                            RL E  G    + +    +DK+                                                               G++ SL    +A LGV Q+W   + R +GIA  ++  AR    +G +VP   VAFS  ++ G  FA+ Y  G    L+Y
Sbjct:  235 NKPKVRRPASSEGQKQDVCKPANKKHKQSNQLFLDFGQKSFGKQSVCRECGMLFMESSEEDVKQHDVICKDYKEGVVCLGWKNERSVSTLGTDERILEIRPGDAPSHWRKVEQVKAIVDKSMGFAQSGRKKEEDDAGMTCYLYIAKRRVVGLLVVKRIHRAY----------------------------RLHEPPGANKPEKNKNTIDDKRG------------------------------------------------------------DDGISRSLKS-TKAILGVHQIWSHGSHRGRGIASSLVTAARDNLVFGMMVPAELVAFSSPTDEGLRFAKRYV-GTDRPLIY 498
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: XP_007203671.1 (protein CHROMOSOME TRANSMISSION FIDELITY 7 [Prunus persica] >ONH95908.1 hypothetical protein PRUPE_7G095100 [Prunus persica])

HSP 1 Score: 114.8 bits (286), Expect = 5.800e-22
Identity = 96/346 (27.75%), Postives = 147/346 (42.49%), Query Frame = 0 
Query:   31 SASFANRAVAASKKAPTQTFLDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKGQRLVW--GAEGKDRVIEVRPGDGGPQLLKMGEVKRVMDQEMGFVPLVEGQSALRPTEKAFLYVHDKRVVGCLVAEKIVAAHPVLEAMPSEEWEGRETTAEELVHGAKDGRLQECGGKKACKDHAGAENDKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKGKALAPPSSQFRQGRKGKEEAAASLLPK---GVAYSLHDMAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQLSNAGYSFARSYTEGGGALLVY 372
            S +     V   K++  Q +L+FGQ      T C  CG+ Y  G+ EDEK H +F +  + G+ F+GW  +R+V    AEG  R++ V   D   Q  K+GEV ++M+ E+G          L    K +L++  +R+VGCLVAE I  AH VL                  V+G+ DG                                                       TK   L     +F++    K  +    L +   G  +   +   A  G++ +WV++ +RRK IA  +L+  R  F  GFV+  +++AFSQ ++AG + A +Y  GGG  LVY
Sbjct:   83 SFTLGRTVVKNKKRSYAQFYLEFGQSDFNLHT-CSTCGVKYTAGDEEDEKAHKAFHKDYTRGIQFKGWYNERVVHTPSAEG-GRIVLVLDCDPAAQRNKVGEVVKMMESELG------SGWILHKLCKVYLFILSQRIVGCLVAEPIKEAHKVLSC---------------AVNGSSDG--------------------------------------------------TTTNETKLTTLQFGDIRFQREVMRKAPSVPEALNENLNGAIFCEEEAVPAVCGIRAIWVTQANRRKHIATQLLDALRKSFCMGFVLEHSQLAFSQPTSAGKALASNYI-GGGYFLVY 354
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: ETI44793.1 (hypothetical protein F443_10548 [Phytophthora parasitica P1569] >ETK84764.1 hypothetical protein L915_10307 [Phytophthora parasitica] >ETL38182.1 hypothetical protein L916_10210 [Phytophthora parasitica] >ETO73403.1 hypothetical protein F444_10647 [Phytophthora parasitica P1976] >ETP14578.1 hypothetical protein F441_10487 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 114.8 bits (286), Expect = 5.800e-22
Identity = 88/345 (25.51%), Postives = 138/345 (40.00%), Query Frame = 0 
Query:   27 PSSSSASFANRAVAASKKAP-TQTFLDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKGQR-LVWGAEGKDRVIEVRPGDGGPQLLKMGEVKRVMDQEMGFVPLVEGQSALRPTEKAFLYVHDKRVVGCLVAEKIVAAHPVLEAMPSEEWEGRETTAEELVHGAKDGRLQECGGKKACKDHAGAENDKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKGKALAPPSSQFRQGRKGKEEAAASLLPKGVAYSLHDMAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQLSNAGYSFARSYTEGGGALL 370
            P   +A+ +   ++ S   P TQ+++D GQ+S GK   C  CGLLY  GE EDE++H  FC+ +  G+ F  WK +R L    +   R++E+R  D    + K+ E+K+V+D  +GF   VE +  L+ +   F+Y+ D +VVGC+  E+I  A  +            + T   LV                                                                                  +   S+   G   +  D   A +G+ Q+WV  + RRK IA  M++V R +  YG  V +  VAF+Q +  G  FA+ Y E    L+
Sbjct:   64 PEPKAATCSRELLSPSAVCPSTQSYIDVGQRSFGKHVTCAACGLLYTAGEEEDEREHLKFCKRMKRGITFSKWKKERVLKTFPDTSARILEIRRDDPSAHVKKLLEIKKVLDDALGF---VEAEVFLQRSN--FVYIQDHQVVGCVNTERITKAFTL------------DKTTSNLV--------------------------------------------------------------------------------VSDEETSVSADGAVTASTDSKPAVIGICQLWVHPSFRRKSIATRMVDVVREKSIYGMHVTKNLVAFAQPTRNGLRFAQKYMEPAEVLI 311
[Close]
BLAST of NO01G03210 vs. NCBI_GenBank
Match: ETL91317.1 (hypothetical protein L917_10146 [Phytophthora parasitica] >KUF94533.1 Bidirectional sugar transporter SWEET3 [Phytophthora nicotianae])

HSP 1 Score: 114.8 bits (286), Expect = 5.800e-22
Identity = 88/345 (25.51%), Postives = 138/345 (40.00%), Query Frame = 0 
Query:   27 PSSSSASFANRAVAASKKAP-TQTFLDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKGQR-LVWGAEGKDRVIEVRPGDGGPQLLKMGEVKRVMDQEMGFVPLVEGQSALRPTEKAFLYVHDKRVVGCLVAEKIVAAHPVLEAMPSEEWEGRETTAEELVHGAKDGRLQECGGKKACKDHAGAENDKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKGKALAPPSSQFRQGRKGKEEAAASLLPKGVAYSLHDMAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQLSNAGYSFARSYTEGGGALL 370
            P   +A+ +   ++ S   P TQ+++D GQ+S GK   C  CGLLY  GE EDE++H  FC+ +  G+ F  WK +R L    +   R++E+R  D    + K+ E+K+V+D  +GF   VE +  L+ +   F+Y+ D +VVGC+  E+I  A  +            + T   LV                                                                                  +   S+   G   +  D   A +G+ Q+WV  + RRK IA  M++V R +  YG  V +  VAF+Q +  G  FA+ Y E    L+
Sbjct:   64 PEPKAATCSRELLSPSAVCPSTQSYIDVGQRSFGKHVTCAACGLLYTAGEEEDEREHLKFCKRMKRGITFSKWKKERVLKTFPDTSARILEIRRDDPSAHVKKLLEIKKVLDDALGF---VEAEVFLQRSN--FVYIQDHQVVGCVNTERITKAFTL------------DKTTSNLV--------------------------------------------------------------------------------VSDEETSVSADGAVTASTDSKPAVIGICQLWVHPSFRRKSIATRMVDVVREKSIYGMHVTKNLVAFAQPTRNGLRFAQKYMEPAEVLI 311
The following BLAST results are available for this feature:
BLAST of NO01G03210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29255.16.600e-8248.35Acyl-CoA N-acyltransferase [Nannochloropsis gadita... [more]
XP_005852573.14.900e-3759.06hypothetical protein NGA_0369920, partial [Nannoch... [more]
XP_002902720.17.400e-2527.83N-acetyltransferase, putative [Phytophthora infest... [more]
POM73226.15.300e-2326.09N-acetyltransferase [Phytophthora palmivora var. p... [more]
XP_005852574.16.900e-2360.75n-acetyltransferase esco2 [Nannochloropsis gaditan... [more]
XP_009531392.19.000e-2327.51hypothetical protein PHYSODRAFT_511827 [Phytophtho... [more]
EJK62222.12.600e-2226.84hypothetical protein THAOC_17173, partial [Thalass... [more]
XP_007203671.15.800e-2227.75protein CHROMOSOME TRANSMISSION FIDELITY 7 [Prunus... [more]
ETI44793.15.800e-2225.51hypothetical protein F443_10548 [Phytophthora para... [more]
ETL91317.15.800e-2225.51hypothetical protein L917_10146 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008000NSK008000Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03210.1NO01G03210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576955gene_322Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100029g3gene1373Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03210.1NO01G03210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03210 ID=NO01G03210|Name=NO01G03210|organism=Nannochloropsis oceanica|type=gene|length=1457bp
CAAAAAGTTGCAACGGCTCTTCGTCACGACGCGCTACGACCTACTCCTCA
GACACCACAACATCGTATACAGGACAACCAGGGGGACCAAAAACAGCCTT
GGAGCGCCAGGGTCATGCCTAGAGgtaagtgcctcaagagattctctcct
catcggcctcaatctcatcaccctttccctcttttccaccctcatcccct
aatcagGCTCCTCATCCGTATTTGGCAGTCTCACGGGTTGCCTTCGCAAC
GGCAATAAGGCCAAAAAGCGACCACCCTCTTCTTCCTCCGCCAGTTTCGC
CAACAGAGCCGTCGCTGCCTCCAAGAAAGCTCCCACCCAAACGTTCTTGG
ACTTTGGGCAAAAATCCCTAGGGAAGCGCACGCTCTGTGGCGTGTGCGGC
CTCCTGTACGTGAACGGTGAGGCCGAGGACGAAAAGGATCACGCCTCGTT
CTGCCGGAGCATAAGCGCGGGCCTGGTTTTTCAGGGCTGGAAGGGGCAAC
GACTGGTGTGGGGCGCCGAGGGCAAGGACAGAGTGATTGAGGTGCGACCT
GGGGACGGGGGTCCGCAGCTGCTCAAGATGGGAGAGGTGAAGCGAGTCAT
GGACCAAGAAATGGGTTTTGTGCCTTTGGTAGAAGGCCAGAGTGCTTTAC
GGCCTACGGAGAAGGCGTTTTTGTATGTGCATGACAAACGGGTGGTGGGG
TGTTTGGTCGCAGAAAAGATTGTGGCGGCGCATCCAGTGTTGGAGGCCAT
GCCATCTGAGGAGTGGGAAGGGAGGGAGACGACGGCGGAAGAGTTGGTAC
ATGGGGCGAAAGATGGGAGGCTCCAGGAGTGTGGTGGAAAGAAGGCATGT
AAGGATCATGCGGGGGCGGAGAATGACAAGCAAGAGCAGAAAGATCAAAA
GCCACCACCGGCCAAGATGCATCGAGTGGACGATAAGGACACCACCAGCA
ATAGCAACAGCAGCAGCAGCAGCATCGGTCGTACAAAAGGAAAAGCACTA
GCACCGCCCTCATCGCAGTTCCGACAAGGTAGAAAGGGGAAGGAGGAAGC
GGCCGCCAGCCTTCTCCCTAAGGGTGTCGCCTACTCCTTACACGACATGG
CAGAGGCCACGTTAGGGGTAAAACAGGTCTGGGTCAGCAAAAACAGTCGC
CGGAAAGGGATAGCGAGACTGATGCTAGAAGTGGCACGGGCTCGCTTTTA
CTATGGCTTTGTCGTGCCAAGAGCTAAAGTGGCATTCTCGCAGTTGAGCA
ATGCGGGGTATTCGTTTGCAAGGTCGTACACGGAGGGAGGGGGGGCGCTG
CTTGTGTATTAGACACCGGGTAAGGAGACTGTGTGGGTTTCGATAGTGAG
GAACCACTGTTATGCAAGGATTCGCACCGCCTTAATGTAGATAGTTGATA
GTTAACGAGAGGGGTGGTGCACACATGCAAGGGACGACAAGTCCGCGACA
GAAATTT
back to top

protein sequence of NO01G03210.1

>NO01G03210.1-protein ID=NO01G03210.1-protein|Name=NO01G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MPRGSSSVFGSLTGCLRNGNKAKKRPPSSSSASFANRAVAASKKAPTQTF
LDFGQKSLGKRTLCGVCGLLYVNGEAEDEKDHASFCRSISAGLVFQGWKG
QRLVWGAEGKDRVIEVRPGDGGPQLLKMGEVKRVMDQEMGFVPLVEGQSA
LRPTEKAFLYVHDKRVVGCLVAEKIVAAHPVLEAMPSEEWEGRETTAEEL
VHGAKDGRLQECGGKKACKDHAGAENDKQEQKDQKPPPAKMHRVDDKDTT
SNSNSSSSSIGRTKGKALAPPSSQFRQGRKGKEEAAASLLPKGVAYSLHD
MAEATLGVKQVWVSKNSRRKGIARLMLEVARARFYYGFVVPRAKVAFSQL
SNAGYSFARSYTEGGGALLVY*
back to top
Synonyms
Publications