NO01G03200, NO01G03200 (gene) Nannochloropsis oceanica

Overview
NameNO01G03200
Unique NameNO01G03200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1796
Alignment locationchr1:842235..844030 -

Link to JBrowse

Properties
Property NameValue
DescriptionDynein regulatory complex subunit 2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:842235..844030 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0070286axonemal dynein complex assembly
Vocabulary: Cellular Component
TermDefinition
GO:0031514motile cilium
GO:0005858axonemal dynein complex
Homology
BLAST of NO01G03200 vs. NCBI_GenBank
Match: KOO33046.1 (coiled-coil domain-containing protein 65-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 146.7 bits (369), Expect = 1.800e-31
Identity = 118/426 (27.70%), Postives = 211/426 (49.53%), Query Frame = 0
Query:   20 KLSAKWAALLRLITTDAATKDGIKALAEMYGRIFKDKDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEA-YEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSLVEGTLFHPPGATTNSI--SNTNNSGEGVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKT 443
            K+  +W  L+RL+  +   K+ I+ +++ + R    KDAL+++L  D + SE++ Q A  AH+   + L+  H +    +E  F RDL+ +++EF +E   + + HA  +  +  +L  +E  + + +   RQE + + RE +K +  E+   LR  L   I+ L +H       + S     T               + K++ I+DQ     IE ++RK+ +   +   W+  + T+G +   RN A+  E+ A+    ++LK  MN+ R+ +   L+ L  ++  A   L+ + E    +L LAEL  K E E++  L   + S+ E        A       S+   S +G        L++F +RYN+ LL  +A+   R+ L  +N  L+  ++QYLDG++VN+ ++N  NPLLVV  KT
Sbjct:  469 KILTQWRKLMRLVKVEDLRKE-IEIISQQHEREVDRKDALIQVLDRDLEDSEEQYQMALRAHLLIVDKLIDLHNSRLRGIEFEFERDLQELRDEFGSERYEMDRSHATHKKEMLDILAQMEMDFTEQENDARQEFE-STREEIKNRNSEEYNVLRFTLEGLIEELERHFDSAHSNYMSTTEQRT--------------QDFKSLTIRDQQSARTIETQMRKLQRLQDQIAHWKQKLATNGAKCEARNAAMKGERDAIARHFQELKARMNRFREREAARLQELTINSQAAITTLTERKERAEHILKLAELTRKLETEREKVLQFYESSVEEEERAASEAAEVRKSLQSSAAASKDGHPIDEWRYLDNFFKRYNKVLLDVMAIERERNRLATQNGDLRSILKQYLDGISVNEDVINNPNPLLVVNHKT 878          
BLAST of NO01G03200 vs. NCBI_GenBank
Match: XP_008617590.1 (hypothetical protein SDRG_13288 [Saprolegnia diclina VS20] >EQC28951.1 hypothetical protein SDRG_13288 [Saprolegnia diclina VS20])

HSP 1 Score: 144.1 bits (362), Expect = 1.200e-30
Identity = 126/454 (27.75%), Postives = 204/454 (44.93%), Query Frame = 0
Query:   56 KDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSLVE--------GTLFH--------------PPGATTNSISNTNNSGEGVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKTKXXXXXXXXXXXXXXXXXXXXXXXXXKGHHPCVIEGNHMLQTGRL 488
            KDA+++ML  D + +E++ Q A  +H+   + L+         LE  F +DL+ ++ EF  E   + KQH  E+  L  +++++EA EK            +RE ++ +  E I  LR  L S I+ L QH +     +       T               + K +  KDQ L+  IE K+RKI++       WR  +  + +E ++RN+AL  EK  +    ++LK  MN  R   +K L  L   A   K  L+ + EL  R+L LAELA K E E++  L     S+ +         +L H              P   T  ++   +    G        L+ F +RYN++LL  +A+ + +D + +EN  LQ  ++QYLDG+TVN+ +++  NPLLVV  +                           K  +  VI+ NHM+ T R+
Sbjct:  120 KDAIIQMLDRDLEEAEEQYQMALRSHLLNVDKLIDLQDGRLLGLENEFEKDLQIIEREFSVEKEKITKQHHLEKHELLNIMRAVEAQEKEXXXXXXXXXXXLREEIRNKNLEDINVLRITLDSNIEELEQHFETAHLNYLQNTDQRT--------------QDFKYLTAKDQELSKDIEIKIRKIERLQANLTHWRTKIAQNVRECNERNRALEEEKGQIATHFQQLKAKMNHMRDEHRKRLTELSHLARATKLKLTEEQELAERILKLAELARKLETEREQVLPFYHSSIEDEETATDAVNSLKHEHQLPSVGLPSDVDPVEQTKLALLQPHGELNGEPVPEWEYLDLFWKRYNKALLDTMAVQKEKDRIEKENIELQAVLKQYLDGITVNEHVMSSVNPLLVVNGR------------------LTLNQPAAVKEKNHAVIDANHMVATHRV 541          
BLAST of NO01G03200 vs. NCBI_GenBank
Match: XP_012205127.1 (hypothetical protein SPRG_10611 [Saprolegnia parasitica CBS 223.65] >KDO24183.1 hypothetical protein SPRG_10611 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 141.7 bits (356), Expect = 5.900e-30
Identity = 118/405 (29.14%), Postives = 191/405 (47.16%), Query Frame = 0
Query:   56 KDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSLVE--------GTLFH--------------PPGATTNSISNTNNSGEGVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVV 439
            KDA+++ML  D + +E++ Q A  +H+   + L+         LE  F +DL+ ++ EF  E   + KQH  E++ L  +++++EA EK            +RE ++ +  E I  LR  L S I+ L QH +     +       T               + K +  KDQ L+  IE K+RKI++       WR  +  + +E ++RN+AL  EK  +    ++LK  MN  R   +K L  L   A   K  L+ + EL  R+L LAELA K E E++  L     S+ +         +L H              P   T  ++   +    G        L+ F +RYN++LL  +A+ + +D +  EN  LQ  ++QYLDG+TVN+ +++  NPLLVV
Sbjct:  120 KDAIIQMLDRDLEEAEEQYQMALRSHLINVDKLIDLQDGRLLGLENEFEKDLQIIEREFSVEKEKITKQHHLEKNELLNIMRAVEAQEKEXXXXXXXXXXXLREEIRNKNLEDINVLRITLDSNIEELEQHFETAHLNYLQNTDQRT--------------QDFKYLTAKDQELSKDIEIKIRKIERLQANLTHWRTKIAQNVRECNERNRALEEEKSQIATHFQQLKAKMNHMRDEHRKRLTELSHLARATKLKLTEEQELAERILKLAELARKLETEREQVLPFYHSSIEDEETATDAVNSLKHEHQLPSVGLPSDVDPVEQTKLALLQPHGELNGEPVPEWEYLDLFWKRYNKALLDTMAVQKEKDRIEMENIELQAVLKQYLDGITVNEHVMSSVNPLLVV 510          
BLAST of NO01G03200 vs. NCBI_GenBank
Match: XP_005090939.1 (PREDICTED: coiled-coil domain-containing protein 65-like isoform X2 [Aplysia californica])

HSP 1 Score: 141.0 bits (354), Expect = 1.000e-29
Identity = 112/430 (26.05%), Postives = 209/430 (48.60%), Query Frame = 0
Query:   20 KLSAKWAALLRLITTDAATKDGIKALAEMYGRIFKDKDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSL-------VEGTLFHPPGATTNSISNTNNSGEGVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKT 443
            KL+ +W  ++R        KD I+ L++ + R+   KDA+++ L  D   +E++   A  +H++  + L+   +     L   ++ +LE +  EF  E A+L  QH  E + ++ +L +++   + ++ E +    ++R+ +K +  E+   LR  L +++D L Q  +     +                     +T  +++ IKD+     IE ++RK+ +   +  + +  M+ + KE  +RN+ L  ++  +     +LK  MN+ R  ++  L  L  ++N A +++  Q E G  +L LAE+  K E E++  L     SL       VE  +  PP      + +   S           L +F +RYN+ LL K+AL + + T+ +EN  L+  ++QYLDG++VND IL+  NPL VV  KT
Sbjct:   61 KLNHQWRNIMREAKAKELKKD-IEILSQTFERVIDRKDAVIKSLSKDIAEAEEQYAMALRSHLQNVDYLMELQKQRLEALTREYSVELEIVCEEFDLERAMLIDQHNIEMNDIADILFAMDQNFQERENEAKSEFQSMRDEIKNKNLEEKHALRVQLETKVDDLWQQFRQALQNYNETT--------------EEKKTVFESLKIKDEKSAKEIELQMRKLQRIGDQIAQLKSKMSANAKECEERNKGLKEDREKMQRHFHELKAEMNQVRDKERDKLTKLTLESNAAIKEIKRQKEKGELILRLAEMCRKMETEEEKVLPFYASSLTKEEQEDVEAAVLEPPSQPLAEVMHDYTS-----------LENFWKRYNKVLLDKLALDKEKQTMAQENHQLRTLLKQYLDGISVNDEILSQVNPLFVVNNKT 464          
BLAST of NO01G03200 vs. NCBI_GenBank
Match: CBJ25505.1 (flagellar associated protein [Ectocarpus siliculosus])

HSP 1 Score: 139.4 bits (350), Expect = 2.900e-29
Identity = 126/493 (25.56%), Postives = 213/493 (43.20%), Query Frame = 0
Query:   20 KLSAKWAALLRLITTDAATKDGIKALAEMYGRIFKDKDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALS------------------RLQGSLVEGT-----LFHPPGATTNSISNTNNSGEGVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKTKXXXXXXXXXXXXXXXXXXXXXXXXXKGHHPCVIEGNHMLQTGRLNT 490
            K+  +W  ++RL   ++  KD I+ L++ + R    KDA+++ML  D + +E + Q A  AH++  + L+    +    LE  F  +                         LS ++ ++EA                    + +  E+I  LR  L +QI+ L QH +     +       T              T+ K +  KDQ L+  IE K+RKI++     + WR  +  + KE+++RN  L+ E+ A+    + LK  MNK R  Q K L  L ++AN  +  L  Q+++  ++L LAELA K E EQ+  L                   + +  L+ G      +        + + ++     G      N L++F +RYN++LL K+A+   ++ L  ENR LQ  ++QYLDG++V + +++  NPLLVV  +                           +      IE NHM+ TGR+NT
Sbjct:  203 KIQNQWRKIMRLAKVESLRKD-IEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQTALRAHLQNMDQLIDLQDSRLLALEQEFEVEXXXXXXXXXXXXXXXXXXXXXXXQELSDIIAAVEAXXXXXXXXXXXXXXXXXXXXRNKNLEEINVLRITLDTQIEDLEQHFETAHINYLQNTDQRT--------------TDFKYLTSKDQELSREIEVKIRKIERLQSSLQHWRTKIAQNVKENAERNSFLMEERNAIQGHFQHLKGRMNKFRAAQAKRLGELTQNANAVQNKLQEQLKMANQILTLAELARKAETEQEKVLPFYVSANTDEVEEEAERILKAERDLIGGKKKPKGVGEEEAVVPSPLQSSAWGKNGQPVPRWNHLDNFHKRYNKALLDKLAVEREQNRLEAENRDLQSIVKQYLDGISVPEDVVSAPNPLLVVNGRVN-------------MAAPDVGAVGGGETRQIAAIEANHMVSTGRVNT 667          
BLAST of NO01G03200 vs. NCBI_GenBank
Match: KOO22712.1 (flagellar associated protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 139.4 bits (350), Expect = 2.900e-29
Identity = 115/424 (27.12%), Postives = 207/424 (48.82%), Query Frame = 0
Query:   20 KLSAKWAALLRLITTDAATKDGIKALAEMYGRIFKDKDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSLV-EGTLFHPPGATTNSISNTNNSGEGVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKT 443
            K+  +W  L+RL+  +   K+ I+ +++ + R    KDA++++L  D + SE + Q A  AH+   + L+  H A    +E  F +DL+ + +EF  E A +   HA  +  +  +L  +E     ++ + +    + RE +K +  E+   LR  L   I+ L +H       F SA      T             + K +   DQ     IE ++R++ +   +   W+  + T+ ++  +RN+A+  EK A+    ++LK  MNK R+ +   L+ L  ++N A   L+ + ++  R+L+ AEL    E E++  L     S+  E           +S+ +   + +G      N L++F +RYN+ LL  +A+   R  L  EN  L+  ++QYLDG++VN+ ++N  NPLLVV  KT
Sbjct:   71 KILTQWRKLMRLVKVEDLRKE-IEIISQQHEREVDRKDAIIQVLDRDLEESEDQYQMALRAHLVMVDRLIDMHNARLRNIEYDFEKDLQELVDEFGAERAEMNASHARHKKEMLDILAQMEMDFTEEEGDARAEFESTREEIKNRNSEEYNILRFTLEGLIEELERH-------FDSAHQNYMAT-------TEVRTQDFKTLTRNDQKSARTIEQQMRRLQRLQDQIAHWKQKLATNARKCEERNKAMKAEKDAIFGHFQELKGRMNKFREREAARLQELSINSNAAISTLTERKKVAERILSHAELCRYLETEREKVLPFYASSVEDEEKASFDADKVRSSLQSAAATKDGQPVEEWNCLDNFFKRYNKVLLDVLAIERERARLRSENGDLRSILKQYLDGISVNEDVINNPNPLLVVNHKT 479          
BLAST of NO01G03200 vs. NCBI_GenBank
Match: ETM44410.1 (hypothetical protein L914_10348 [Phytophthora parasitica] >ETO73193.1 hypothetical protein F444_10841 [Phytophthora parasitica P1976] >ETP42429.1 hypothetical protein F442_10652 [Phytophthora parasitica P10297])

HSP 1 Score: 138.7 bits (348), Expect = 5.000e-29
Identity = 126/485 (25.98%), Postives = 210/485 (43.30%), Query Frame = 0
Query:   20 KLSAKWAALLRLITTDAATKDGIKALAEMYGRIFKDKDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSLVEGTLFHPPGATTNSISNTNNSGE-----------------GVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKTKXXXXXXXXXXXXXXXXXXXXXXXXXKGHHPCVIEGNHMLQTGRL 488
            K+   W  ++RL+  +A  K+ ++  ++ + R    KDAL++ML  D + +E++ Q A  AH+   + L+         LE  F  D                           +++Q+++  EK +          +RE ++ +  E I  LR  L S I+ L QH +     +       T               + K +  KDQ L+  IE K+RKI++  Q    WR  +  + +E S+RN+AL  EK A+    + LK  MN+ R++Q++ L  L + A  A + L   ++L  R+L L EL  K E E++  L   + +L +    +    T      T    E                 GV  S    L+ F +R+N+ LL ++AL   ++ +  ENR LQ  +QQYL G++V+  +L+G+NPLLVV  + +                         K     VI+ NHM+ T R+
Sbjct:  102 KIQNHWRKIMRLVKVEALRKE-VEVRSQNHERDVDRKDALIQMLDRDLEEAEEQFQMALRAHLLNVDELIDLQDERLLGLEKEFETDXXXXXXXXXXXXXXXXXXXXXXXXXXQRIMQAVDQQEKERXXXXXXXHEQLREEIRNKNLEDINVLRITLDSSIEELEQHFETAHLNYLQNTDQRT--------------QDFKYLTAKDQDLSRDIELKIRKIERLQQSLALWRTKIAQNVRECSERNKALEEEKAAISHHFQTLKAKMNRMREDQRRRLADLSQGAREASKKLGTHLQLSERILQLGELVRKLETERERVLPFYKSTLADEQEANELTETVRQAMRTETGREEEEAMQMLDFQPQGLQNGVPVSEWEYLDLFWKRHNKVLLDELALRREKERVANENRELQTILQQYLAGISVSPTVLDGANPLLVVNGRLR---------------LHQPALGEDGKPRAKPVIDANHMVDTNRV 556          
BLAST of NO01G03200 vs. NCBI_GenBank
Match: OWZ20472.1 (Flagellar associated protein [Phytophthora megakarya])

HSP 1 Score: 138.7 bits (348), Expect = 5.000e-29
Identity = 123/486 (25.31%), Postives = 215/486 (44.24%), Query Frame = 0
Query:   20 KLSAKWAALLRLITTDAATKDGIKALAEMYGRIFKDKDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSLVEGTLFHPPGATTNSISNTNNSGE-----------------GVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKTKXXXXXXXXXXXXXXXXXXXXXXXXXKGHHPCVIEGNHMLQTGRLN 489
            K+   W  ++RL+  +A  K+ ++  ++ + R    KDAL++ML  D + +E++ Q A  AH+   + L+         LE  F  D                           +++ +++  EK ++ + ++    +RE ++ +  E I  LR  L S I+ L QH +     +       T               + K +  KDQ L+  IE K+RKI++  Q    WR  +  + +E S+RN+AL  EK A+ +  + LK  MN+ R +Q++ L  L + A  A + L   ++L  R+L L+EL  K E EQ+  L     +L +    +    +        +S E                  V  S    L+ F +R+N+ LL ++AL   ++ +  ENR LQ  +QQYL G++V+  +L+G+NPLLV+  + +                         K     VI+ NHM++T R++
Sbjct:   35 KIQNHWRKIMRLVKVEALRKE-VEVRSQNHERDVDRKDALIQMLDRDLEEAEEQFQMALRAHLLNVDELIDLQDERLLGLEKEFEADXXXXXXXXXXXXXXXXXXXXXXXXXXQRIMHAVDQQEKEREADAKQEHEQLREEIRNKNLEDINVLRITLDSSIEELEQHFETAHLNYLQNTDQRT--------------QDFKYLTAKDQDLSRDIELKIRKIERLQQSLALWRTKIAQNVRECSERNKALEEEKAAISNHFQTLKAKMNRMRDDQRRRLADLSQGARQATKQLDTHLQLSERILQLSELVRKLETEQERVLPFYHSTLADEREANELTESVRLAMRNEHSREEEEALQMLDFQPQGLQNNVLVSEWEYLDLFWKRHNKVLLDELALRREKERVANENRELQTILQQYLAGISVSPTVLDGANPLLVINGRLR---------------LHHPSLGEDGKPRRKPVIDANHMVETNRVS 490          
BLAST of NO01G03200 vs. NCBI_GenBank
Match: ETI44560.1 (hypothetical protein F443_10750 [Phytophthora parasitica P1569] >ETK84546.1 hypothetical protein L915_10496 [Phytophthora parasitica] >ETL37983.1 hypothetical protein L916_10389 [Phytophthora parasitica] >ETL91095.1 hypothetical protein L917_10317 [Phytophthora parasitica] >ETP14380.1 hypothetical protein F441_10683 [Phytophthora parasitica CJ01A1] >KUF95583.1 Interferon-related developmental regulator 1 [Phytophthora nicotianae])

HSP 1 Score: 138.3 bits (347), Expect = 6.600e-29
Identity = 126/485 (25.98%), Postives = 210/485 (43.30%), Query Frame = 0
Query:   20 KLSAKWAALLRLITTDAATKDGIKALAEMYGRIFKDKDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSLVEGTLFHPPGATTNSISNTNNSGE-----------------GVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKTKXXXXXXXXXXXXXXXXXXXXXXXXXKGHHPCVIEGNHMLQTGRL 488
            K+   W  ++RL+  +A  K+ ++  ++ + R    KDAL++ML  D + +E++ Q A  AH+   + L+         LE  F  D                           +++Q+++  EK +          +RE ++ +  E I  LR  L S I+ L QH +     +       T               + K +  KDQ L+  IE K+RKI++  Q    WR  +  + +E S+RN+AL  EK A+    + LK  MN+ R++Q++ L  L + A  A + L   ++L  R+L L EL  K E E++  L   + +L +    +    T      T    E                 GV  S    L+ F +R+N+ LL ++AL   ++ +  ENR LQ  +QQYL G++V+  +L+G+NPLLVV  + +                         K     VI+ NHM+ T R+
Sbjct:  102 KIQNHWRKIMRLVKVEALRKE-VEVRSQNHERDVDRKDALIQMLDRDLEEAEEQFQMALRAHLLNVDELIDLQDERLLGLEKEFETDXXXXXXXXXXXXXXXXXXXXXXXXXXQRIMQAVDQQEKERXXXXXXXHEQLREEIRNKNLEDINVLRITLDSSIEELEQHFETAHLNYLQNTDQRT--------------QDFKYLTAKDQDLSRDIELKIRKIERLQQSLALWRTKIAQNVRECSERNKALEEEKAAISHHFQTLKAKMNRMREDQRRRLADLSQGAREATKKLGTHLQLSERILQLGELVRKLETERERVLPFYKSTLADEQEANELTETVRQAMRTETGREEEEAMQMLDFQPQGLQNGVPVSEWEYLDLFWKRHNKVLLDELALRREKERVANENRELQTILQQYLAGISVSPTVLDGANPLLVVNGRLR---------------LHQPALGEDGKPRAKPVIDANHMVDTNRV 556          
BLAST of NO01G03200 vs. NCBI_GenBank
Match: XP_008906702.1 (hypothetical protein PPTG_12429 [Phytophthora parasitica INRA-310] >ETN07898.1 hypothetical protein PPTG_12429 [Phytophthora parasitica INRA-310])

HSP 1 Score: 138.3 bits (347), Expect = 6.600e-29
Identity = 126/485 (25.98%), Postives = 210/485 (43.30%), Query Frame = 0
Query:   20 KLSAKWAALLRLITTDAATKDGIKALAEMYGRIFKDKDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLEGGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQERQELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATGMTGTXXXXXXXXXXXETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEWRVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKALDEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSLVEGTLFHPPGATTNSISNTNNSGE-----------------GVAASTENPLNSFCRRYNQSLLGKVALHERRDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKTKXXXXXXXXXXXXXXXXXXXXXXXXXKGHHPCVIEGNHMLQTGRL 488
            K+   W  ++RL+  +A  K+ ++  ++ + R    KDAL++ML  D + +E++ Q A  AH+   + L+         LE  F  D                           +++Q+++  EK +          +RE ++ +  E I  LR  L S I+ L QH +     +       T               + K +  KDQ L+  IE K+RKI++  Q    WR  +  + +E S+RN+AL  EK A+    + LK  MN+ R++Q++ L  L + A  A + L   ++L  R+L L EL  K E E++  L   + +L +    +    T      T    E                 GV  S    L+ F +R+N+ LL ++AL   ++ +  ENR LQ  +QQYL G++V+  +L+G+NPLLVV  + +                         K     VI+ NHM+ T R+
Sbjct:  102 KIQNHWRKIMRLVKVEALRKE-VEVRSQNHERDVDRKDALIQMLDRDLEEAEEQFQMALRAHLLNVDELIDLQDERLLGLEKEFETDXXXXXXXXXXXXXXXXXXXXXXXXXXQRIMQAVDQQEKERXXXXXXXHEQLREEIRNKNLEDINVLRITLDSSIEELEQHFETAHLNYLQNTDQRT--------------QDFKYLTAKDQDLSRDIELKIRKIERLQQSLALWRTKIAQNVRECSERNKALEEEKAAISHHFQTLKAKMNRMREDQRRRLADLSQGAREATKKLGTHLQLSERILQLGELVRKLETERERVLPFYKSTLADEQEANELTETVRQAMRTETGREEEEAMQMLDFQPQGLQNGVPVSEWEYLDLFWKRHNKVLLDELALRREKERVANENRELQTILQQYLAGISVSPTVLDGANPLLVVNGRLR---------------LHQPALGEDGKPRAKPVIDANHMVDTNRV 556          
The following BLAST results are available for this feature:
BLAST of NO01G03200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KOO33046.11.800e-3127.70coiled-coil domain-containing protein 65-like prot... [more]
XP_008617590.11.200e-3027.75hypothetical protein SDRG_13288 [Saprolegnia dicli... [more]
XP_012205127.15.900e-3029.14hypothetical protein SPRG_10611 [Saprolegnia paras... [more]
XP_005090939.11.000e-2926.05PREDICTED: coiled-coil domain-containing protein 6... [more]
CBJ25505.12.900e-2925.56flagellar associated protein [Ectocarpus siliculos... [more]
KOO22712.12.900e-2927.12flagellar associated protein [Chrysochromulina sp.... [more]
ETM44410.15.000e-2925.98hypothetical protein L914_10348 [Phytophthora para... [more]
OWZ20472.15.000e-2925.31Flagellar associated protein [Phytophthora megakar... [more]
ETI44560.16.600e-2925.98hypothetical protein F443_10750 [Phytophthora para... [more]
XP_008906702.16.600e-2925.98hypothetical protein PPTG_12429 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008002NSK008002Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03200.1NO01G03200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|236660gene_321Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100029g2gene1374Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03200.1NO01G03200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03200 ID=NO01G03200|Name=NO01G03200|organism=Nannochloropsis oceanica|type=gene|length=1796bp
ATACAACACTGGTGAATCACATAGCTATGGACGGGGAGCAAGATGTGGGG
TCCCTGTCGCTATCGTCTCCATCCGCCCCCGCGAAACTATCAGCTAAATG
GGCCGCCCTTCTGCGCTTGATCACCACCGACGCTGCTACCAAAGATGGCA
TTAAAGCCTTGGCCGAGATGTATGGACGTATATTTAAGGACAAGGATGCT
CTGGTGCGGATGCTGATGGCTGATGCGAAGGCCTCGGAGCAGGAAATGCA
GGCCGCCTACGAGGCGCACGTCCGGCAACGTAATTCTTTGCTCGCATTCC
ACCGTGCGCACACAACTACACTTGAGGGAGGTTTCACCCGCGACCTCGAG
GCCATGAAAAATGAGTTTCAGACGGAAGCTGCGCTTTTAGCAAAACAACA
TGCAGAGGAGCAAAGTGGGCTCAGCCAGCTGCTGCAATCCATCGAGGCCT
ACGAAAAGGGCAAGCAGCAGGAGCGCCAAGAGCTGCAAGCCAACGTGCGG
GAAATTTTGAAGCGACAGGGCCAAGAGCAAATAGTTAAGCTCCGCCAAAA
TCTTACGTCGCAAATCGACGCTTTACTTCAACACTTGCAGGACAAGGCAC
CGGCCTTTACTTCTGCAGCCACGGGAATGACAGGAACGGTGACAACGGCG
ACAGGCACCACTGGCGCCATTGAGACGGAAGCCAAGGCTATGGCGATCAA
GGATCAATCACTGACGACTCTTATCGAGGCGAAAGTACGAAAGATCGACC
AGGAGCTCCAAAGGTGGAAGGAGTGGCGGGTAAATATGACGACCAGCGGG
AAGGAGCACAGCGATCGGAATCAGGCTTTGATAAACGAAAAGCGGGCCCT
ACTTGACCAGCATCGAAAACTTAAGTTGCACATGAACAAACACCGCCAGA
ATCAGCAAAAGACCTTGAAGGCCTTGGATGAGGACGCAAATGGAGCCAAG
GAAGATTTGAGCGCGCAGATTGAGgtgagtgtgtgtatgtgtgagggaaa
agaccttagttgtcaatattacccctacacaccgtattttatgagctcat
cttccatatctctacattagCTTGGCCTACGGGTACTGAACCTGGCAGAA
TTAGCATACAAGAAGGAATTGGAGCAAAAAGGTGCATTGTCTCGCCTGCA
AGGCTCATTGGTCGAAGGCACTCTTTTTCATCCTCCTGGTGCCACCACCA
ACAGTATCAGCAACACCAACAACAGCGGCGAGGGCGTGGCCGCATCGACC
GAAAATCCTTTGAATAGCTTTTGTAGACGGTACAACCAATCATTGTTAGG
AAAGGTTGCCCTTCACGAACGACGGGATACTCTGCTGGAAGAGAATCGAA
TGTTGCAGgtaagacaaaggaaagaagtgggaaagaacagaagagaaagt
gcaatgattgtacaaaagcgggaaacttcccatcatcaagacaatctgaa
accactctcaatctctttttgcaactacagCTCGCCATCCAGCAGTACTT
GGACGGGGTGACTGTCAATGATGGTATCCTCAATGGGAGTAATCCCCTTC
TCGTCGTAAAACCAAAGACCAAGACCCCGCCTCGCCCACCTCGTCGCCAC
GACGGCAGCAGCAACGGCAGCAGCAGCAGCAGCAGTAGCCACCCTCGAAA
GGGGCACCACCCCTGCGTGATTGAAGGCAACCACATGCTCCAGACCGGCC
GGTTGAACACCGCGCCTTTTTTTGTATAGACGTTGCGGGGGAGGAATATT
GGGCGTTATCAGAGGAAGCAAGGAACAGGAAAGGTAATGATTAAAC
back to top

protein sequence of NO01G03200.1

>NO01G03200.1-protein ID=NO01G03200.1-protein|Name=NO01G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=495bp
MDGEQDVGSLSLSSPSAPAKLSAKWAALLRLITTDAATKDGIKALAEMYG
RIFKDKDALVRMLMADAKASEQEMQAAYEAHVRQRNSLLAFHRAHTTTLE
GGFTRDLEAMKNEFQTEAALLAKQHAEEQSGLSQLLQSIEAYEKGKQQER
QELQANVREILKRQGQEQIVKLRQNLTSQIDALLQHLQDKAPAFTSAATG
MTGTVTTATGTTGAIETEAKAMAIKDQSLTTLIEAKVRKIDQELQRWKEW
RVNMTTSGKEHSDRNQALINEKRALLDQHRKLKLHMNKHRQNQQKTLKAL
DEDANGAKEDLSAQIELGLRVLNLAELAYKKELEQKGALSRLQGSLVEGT
LFHPPGATTNSISNTNNSGEGVAASTENPLNSFCRRYNQSLLGKVALHER
RDTLLEENRMLQLAIQQYLDGVTVNDGILNGSNPLLVVKPKTKTPPRPPR
RHDGSSNGSSSSSSSHPRKGHHPCVIEGNHMLQTGRLNTAPFFV*
back to top
Synonyms
Publications