NO01G02920, NO01G02920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02920 vs. NCBI_GenBank
Match: XP_008612609.1 (hypothetical protein SDRG_08497 [Saprolegnia diclina VS20] >EQC33814.1 hypothetical protein SDRG_08497 [Saprolegnia diclina VS20]) HSP 1 Score: 117.9 bits (294), Expect = 4.500e-23 Identity = 72/203 (35.47%), Postives = 121/203 (59.61%), Query Frame = 0 Query: 36 LYRDVEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVGGGANGAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMNFVMGRLSKLLKTKDKYQLWLIIFLTVVLIXXXILTIY 239 L +++ A+R LE+ + +E R ++ HID +++ R++FV+ T+Q L+ + L SD K K+ DER A P R + + +++ Q +++EQD+ L+EL T+V+R+G++A +N E+ +QN ML D++ ++++T E+MNFVM ++S+LLKTKD QL IIFLT+VL+ L IY Sbjct: 62 LTKELATAERSLGFLEQSIRAIEADRTKYAHIDRVQVSSRKSFVSDTRQDLMAMTAALTSDAAKSKVRRDERKM--------LAPLTPAPIDRNSI--------LADEKQHQQQIIKEQDKDLDELHTSVNRLGQVAVTINSEIKSQNEMLKDVDADLDDTTERMNFVMAKMSRLLKTKDTCQLGGIIFLTIVLLVMVFLVIY 248
BLAST of NO01G02920 vs. NCBI_GenBank
Match: AAM12665.1 (syntaxin 6 [Phytophthora infestans]) HSP 1 Score: 117.1 bits (292), Expect = 7.600e-23 Identity = 74/199 (37.19%), Postives = 112/199 (56.28%), Query Frame = 0 Query: 40 VEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVGGGANGAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMNFVMGRLSKLLKTKDKYQLWLIIFLTVVLIXXXILTIY 239 V A++ LE+ + +VE +R +F HID E+A R+AFV T++ L V + +D VK ++ +ER + S + T R N F++++ RQ ++QEQ+ L L + + R+ + ++ E+ QN+ML DL +V+ E+MNFVMGRLSKLLKTKDK QL LI+FL VL L +Y Sbjct: 56 VATAEKSLKFLEETIVMVEANRAKFEHIDAAEIASRKAFVAATRKELQAVSTEISTDTVKTRIRKEERKLMQPAKSSTSFRSNLTGQER-------NERFLEDETQRQQQIMQEQNDSLAGLHSDITRLHGVTVEISSEVKHQNKMLDDLTDDVDEAQERMNFVMGRLSKLLKTKDKCQLGLILFLVAVLAVMIFLVVY 247
BLAST of NO01G02920 vs. NCBI_GenBank
Match: XP_024572697.1 (af404749_1syntaxin 6 [Plasmopara halstedii] >CEG36328.1 af404749_1syntaxin 6 [Plasmopara halstedii]) HSP 1 Score: 113.6 bits (283), Expect = 8.400e-22 Identity = 74/200 (37.00%), Postives = 111/200 (55.50%), Query Frame = 0 Query: 40 VEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVG-GGANGAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMNFVMGRLSKLLKTKDKYQLWLIIFLTVVLIXXXILTIY 239 V A++ LE+ + +VE +R +F HID E+A R+AFV T++ L V + ++ VK ++ +ER M T + R + N F+ E+ RQ ++QEQDQ LE L T + R+ + ++ E+ QN+ML +L +V+ E+MNFVMG LSK LKTKD QL LI+FL VL+ L +Y Sbjct: 62 VTTAEKSVKFLEETIVMVEANRAKFEHIDAAEIASRKAFVAATRKELRAVSTEISAEAVKSRIRQEER----------KLMQKSTTSLRSNLSEHNRNKRFLKEETQRQQQVMQEQDQSLEGLHTDITRLHNVTVEISSEVQQQNKMLDELTNDVDEAQERMNFVMGSLSKFLKTKDTCQLGLILFLMAVLVIMVFLVVY 251
BLAST of NO01G02920 vs. NCBI_GenBank
Match: OEU18749.1 (hypothetical protein FRACYDRAFT_182657 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 112.8 bits (281), Expect = 1.400e-21 Identity = 70/204 (34.31%), Postives = 120/204 (58.82%), Query Frame = 0 Query: 36 LYRDVEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVGGGANGAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMNFVMGRLSKLLKTKDKYQLWLIIFLTVVLIXXXILTIYV 240 L R +++A+ +++K V VEN R +F HID+++ ERR+ V ++ + + + SD +K K+ +DER+ +R DG +G R N FI + +++ +++QEQD+ L+ELG AV RVG MA + +E+ QN+ML DL+ ++ E++ VMG+L+K + TK++ QL I+ LT++ I IY+ Sbjct: 107 LKRHLKSAESTLRDVQKTVQAVENDRDKFPHIDDSQFFERRSLVETSRSRIQHAKDEMNSDIIKKKVLSDERNRAVARSGDG-LLGAKNDEER------QNTDFILDNQAQSSMLMQEQDETLDELGNAVLRVGEMAGTIGEEIGQQNKMLNDLDEDMTTAEEELGMVMGKLAKFMGTKNRGQLKTIVILTLIAIIMFFAAIYL 303
BLAST of NO01G02920 vs. NCBI_GenBank
Match: EWM29217.1 (syntaxin 6 [Nannochloropsis gaditana]) HSP 1 Score: 112.1 bits (279), Expect = 2.400e-21 Identity = 53/77 (68.83%), Postives = 65/77 (84.42%), Query Frame = 0 Query: 36 LYRDVEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRS 113 L R++EAA+ QC ELEKVVA+VE +RQRFRHIDN+E+ +RRAFVT+ KQSLVK+WNNL+SD+VK KMS D RD S Sbjct: 49 LCREIEAAENQCRELEKVVAVVEKNRQRFRHIDNHEIGQRRAFVTKMKQSLVKIWNNLESDYVKNKMSGDRRDVSMS 125
BLAST of NO01G02920 vs. NCBI_GenBank
Match: ETI35546.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETM35695.1 hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 109.8 bits (273), Expect = 1.200e-20 Identity = 66/175 (37.71%), Postives = 101/175 (57.71%), Query Frame = 0 Query: 40 VEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVGGGANGAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMNFVMGRLSKLLKTK 215 V A++ LE+ + +VE +R +F HID E+A R+AFV T++ L V + +D VK ++ +ER +S S + T R N F++E+ RQ ++QEQDQ L L + + R+ + ++ E+ +QN+ML DL +VE E+MNFVMGRLSK+LKTK Sbjct: 63 VSTAEKSVKFLEETIVMVEANRTKFEHIDAAEIASRKAFVAATRKELQAVSAEISTDAVKTRIRKEERKLMQSAKSSTSFRSNLTGQER-------NEHFLEEETQRQQQIMQEQDQSLAGLHSDITRLHGVTVEISSEVKSQNKMLDDLTDDVEEAQERMNFVMGRLSKMLKTK 230
BLAST of NO01G02920 vs. NCBI_GenBank
Match: XP_008912745.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETN02064.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310]) HSP 1 Score: 109.8 bits (273), Expect = 1.200e-20 Identity = 66/175 (37.71%), Postives = 101/175 (57.71%), Query Frame = 0 Query: 40 VEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVGGGANGAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMNFVMGRLSKLLKTK 215 V A++ LE+ + +VE +R +F HID E+A R+AFV T++ L V + +D VK ++ +ER +S S + T R N F++E+ RQ ++QEQDQ L L + + R+ + ++ E+ +QN+ML DL +VE E+MNFVMGRLSK+LKTK Sbjct: 63 VSTAEKSVKFLEETIVMVEANRTKFEHIDAAEIASRKAFVATTRKELQAVSAEISTDAVKTRIRKEERKLMQSAKSSTSFRSNLTGQER-------NEHFLEEETQRQQQIMQEQDQSLAGLHSDITRLHGVTVEISSEVKSQNKMLDDLTDDVEEAQERMNFVMGRLSKMLKTK 230
BLAST of NO01G02920 vs. NCBI_GenBank
Match: ETO64290.1 (hypothetical protein, variant 3 [Phytophthora parasitica P1976]) HSP 1 Score: 109.8 bits (273), Expect = 1.200e-20 Identity = 66/175 (37.71%), Postives = 101/175 (57.71%), Query Frame = 0 Query: 40 VEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVGGGANGAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMNFVMGRLSKLLKTK 215 V A++ LE+ + +VE +R +F HID E+A R+AFV T++ L V + +D VK ++ +ER +S S + T R N F++E+ RQ ++QEQDQ L L + + R+ + ++ E+ +QN+ML DL +VE E+MNFVMGRLSK+LKTK Sbjct: 63 VSTAEKSVKFLEETIVMVEANRTKFEHIDAAEIASRKAFVAATRKELQAVSAEISTDAVKTRIRKEERKLMQSAKSSTSFRSNLTGQER-------NEHFLEEETQRQQQIMQEQDQSLAGLHSDITRLHGVTVEISSEVKSQNKMLDDLTDDVEEAQERMNFVMGRLSKMLKTK 230
BLAST of NO01G02920 vs. NCBI_GenBank
Match: ETP33510.1 (hypothetical protein, variant 4 [Phytophthora parasitica P10297]) HSP 1 Score: 108.6 bits (270), Expect = 2.700e-20 Identity = 68/188 (36.17%), Postives = 108/188 (57.45%), Query Frame = 0 Query: 40 VEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVGGGANGAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMNFVMGRLSKLLKTKDKYQLWLIIFLTV 228 V A++ LE+ + +VE +R +F HID E+A R+AFV T++ L V + +D VK ++ +ER +S S + T R N F++E+ RQ ++QEQDQ L L + + R+ + ++ E+ +QN+ML DL +VE E+MNFVMGRLSK+LKTK ++ I+F+ + Sbjct: 63 VSTAEKSVKFLEETIVMVEANRTKFEHIDAAEIASRKAFVATTRKELQAVSAEISTDAVKTRIRKEERKLMQSAKSSTSFRSNLTGQER-------NEHFLEEETQRQQQIMQEQDQSLAGLHSDITRLHGVTVEISSEVKSQNKMLDDLTDDVEEAQERMNFVMGRLSKMLKTKG-MGIFFILFIKI 242
BLAST of NO01G02920 vs. NCBI_GenBank
Match: ETK75801.1 (hypothetical protein, variant 4 [Phytophthora parasitica]) HSP 1 Score: 108.2 bits (269), Expect = 3.500e-20 Identity = 68/188 (36.17%), Postives = 108/188 (57.45%), Query Frame = 0 Query: 40 VEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSLVKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVGGGANGAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMNFVMGRLSKLLKTKDKYQLWLIIFLTV 228 V A++ LE+ + +VE +R +F HID E+A R+AFV T++ L V + +D VK ++ +ER +S S + T R N F++E+ RQ ++QEQDQ L L + + R+ + ++ E+ +QN+ML DL +VE E+MNFVMGRLSK+LKTK ++ I+F+ + Sbjct: 63 VSTAEKSVKFLEETIVMVEANRTKFEHIDAAEIASRKAFVAATRKELQAVSAEISTDAVKTRIRKEERKLMQSAKSSTSFRSNLTGQER-------NEHFLEEETQRQQQIMQEQDQSLAGLHSDITRLHGVTVEISSEVKSQNKMLDDLTDDVEEAQERMNFVMGRLSKMLKTKG-MGVFFILFIKI 242 The following BLAST results are available for this feature:
BLAST of NO01G02920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02920 ID=NO01G02920|Name=NO01G02920|organism=Nannochloropsis oceanica|type=gene|length=3208bpback to top protein sequence of NO01G02920.4 >NO01G02920.4-protein ID=NO01G02920.4-protein|Name=NO01G02920.4|organism=Nannochloropsis oceanica|type=polypeptide|length=240bpback to top protein sequence of NO01G02920.3 >NO01G02920.3-protein ID=NO01G02920.3-protein|Name=NO01G02920.3|organism=Nannochloropsis oceanica|type=polypeptide|length=186bpback to top protein sequence of NO01G02920.2 >NO01G02920.2-protein ID=NO01G02920.2-protein|Name=NO01G02920.2|organism=Nannochloropsis oceanica|type=polypeptide|length=240bpback to top protein sequence of NO01G02920.1 >NO01G02920.1-protein ID=NO01G02920.1-protein|Name=NO01G02920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=254bpback to top Synonyms
Publications
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