NO01G02660, NO01G02660 (gene) Nannochloropsis oceanica

Overview
NameNO01G02660
Unique NameNO01G02660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3676
Alignment locationchr1:684878..688553 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:684878..688553 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G02660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR089ngnoR089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02660.1NO01G02660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G02660.2NO01G02660.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576725gene_257Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g99gene1430Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02660.1NO01G02660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G02660.2NO01G02660.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02660 ID=NO01G02660|Name=NO01G02660|organism=Nannochloropsis oceanica|type=gene|length=3676bp
TATTTTTCTTTTTGTCATCGACTCACACGTGTTATTACAGCTGACAGATA
CAAAGTTGCCGAGTGATCCCCCTCACTCTTATCCCCTGTGATCCCGTTTC
TAACTCTTCTATACATTTTTGCGTGCTTCTTTCGCTGTCCCCCCCTCCAC
GAATTGCTCAAATGACGAAAATATTCTTCACATCCGATGGCGCAAACGAA
TCGCCCGTTCGAGGACAAGTCACCCACACCGCCCCTGACCCATCGACGGA
CAATAAATTCTCACTGATGGCCCGCTGAGAATACACACGGCCGTTCGGCA
ATACCATGGGCGGGTTCCCTCCATCCATTGCTTCCCCAGTGCACCGACAC
GTCAAATACGAATTCCCAAAATGCGCCAACGGCAAACCCACTGCCAGAGC
GCGGCCGGTTGGAGAGCACACAGGACAGTCTTGGTTATAGTGCCCTTCAT
CCTCCGCCACCATCCCTATCTCTTGACCATCGTCTTCCTCCTTCGCTTTA
GCCATGATTTCTCCCGGAGCCCCAACACGACACAGAGGGGTCTTGAGGGC
CGTCAAGCCCGCTTGAAGGCAGACCTCGAGCGTGGAATAGTCCTGGGTCA
TCCCATAACACCGCCGCGCCGCCGCCGCAAACGAATCCCCCAATTCACGC
AAGCGTTCCACAGCGAAAAGCCGCTGATACTCAGGCACGGTACAAGCCTC
CGGGTCGGCAAGCGCAAGGGTGGCCATGGCCTGCTGGACCTCCCAAAGCT
GCTCAATTGACAGACCGGGAGTATTCGTAGCTCCACCCGCACCACCAACG
GCAGCAGCAGCACTGTTGGCTGTCGGATCAAGATGCTCGCTCGCATATTC
TAGTGCCTGAATCCGGTGTCCCTTTCGCACCAGCTCCAAGAATTGTTGCT
TGTGCAGTTGAAATTCGAGGGGGCAATTCAATCGCCGTAACTTGGAGGCG
TGGTCCGCGCACCACGCCAACGCACCCATGCAATCCCGCTTTTCGACTAG
TTGTCGTTCCACTGCGCGACATTTAATGAAGATGTCCAGGTCGAACAACT
TGCCTACTCCTCCTGCTCCTGCTCCTTGTGTACTGGCCCCTTCTTTCTCC
AGCAGGCTTAGGCTCTCAAGGTAGCCCTGCCGCAGTAAATACTCGCCTAC
CAAACGCTCTAACTGTAATTTTCTTCTCAGCGTCAGTCCATGTCTTGAAG
GATATTGTGGGGGGACAATTGATAATGAAGGGGAAGCCTCTTCGTCTTTC
TGTGCAGTTGCCAATGTCTGGAGCTTCCGTTGGCATCGCTCGAATAAGTC
CTTCTCCTGCGCGTCCGCCGCCACCAAAGCCTCTCGCAGGTGGAGTAACC
GCACCCGCAGTGCATCTGTCGTGGAGTCGGGATTGTCCTGTTTCTTGAGG
AGTGTCACAATCTGCCCAAGCTCGCGCATCACCTAGGGTGGGTTGTATGG
GGATGAGGATCTTTCGTTGGACGGAGGACGGGCAACGGCATCCCGCCTTT
TACAAATAAATCAGCCATCTCAATTGATACCTGCTTGCGGACCCGCTGGA
AGTGGGAGCTAAGGGCTTCGCAGGAGATTCTGACAAGCGTGTATTCCAGA
TGAAACATGGTCTGGGCTGCTGATTATGGAGGTGCTCTCCAGGGTAAATA
GAACCAAGAAAGCCGATCAATTTTGCGCCGCCGGGCCAATTATGTGTGTC
CTATGACGCGAAGGAAACTGTGCGTGGGGCTGTGGGTGCTTTAGTGCAGG
ATGTGGAGCGTGGAGTATCCAAGCAACAAGTCGCGAAGACGCGAAAAGAA
GGCGGCCATCTCAGAGGCTCGCTTGCCTCCCTTGCTTTGGCTTGATTCCC
ACATAATACGCGCACACATGCTTCGCAAGCAAGACCATCGCTTACACCTC
TCCAGTCAATTTGTTCCTCCTTATTAATGGCGCGCCTTCCTTTCTTTCAC
TTACCCTTACGCGCGATACAAACCATAGGCACCAGAAATCGCGCATGCGA
AGGCATGAAATCTGAGCCGATGATGAACTAAGTTAGCAAGTGGATGTGGA
TAGACAAGCCTCCGTTGTCTACGACACACCAGATAAATGGGACGCAGCCA
GCTTCAATACAATCGGCGCGCTCGGGGCCGGGGCCGGGCCGGGGGCCGTG
GCCCTGCAGGGGGTCCCTCAGGGCGTGGGGGAGGGGGAGGAGGTCGAGTC
GCGTCTGCCAAGGCAAGTCAAAAAGGTATGAAGAAAAGACACCCACGAGT
GGCCATTTGTGCTATTTGTTTGGGTTTGTCAGAAAACCCATTGTACATCT
CCTCAGTGAAGTAAAGACAGGGAAGAGAGTAGTTTAAGTCAGGAAAGAGC
ATCGACATACAAACAGTAGTCTTTTCGGAACGTGGACAGATAATAATCCC
AAACCTTAAGTATTGACACGTCGTTTCCATCGTTATTCTTTGTAAATTAG
CGGCTCTGCGGCAGCTTCCGTCGAATCAAGATCGTTTCCGACAAGGCGAC
GGTGGTGGGAGCCTCGGTGGAGAAGGGAGACTTTTGTCGGATAGTGAAGG
CGGAGATGACTTAAGGGTTTATGCATGGGGGTGAGTGACACCAAAAAAGT
CCGATGTGTGATGATGTGATGCATTGTACATTTATCGGTTTTCATCTTCT
GGTTTTCCCCTCCTTGAATTGCACAAGCCTCACGCTTTAACCTGTAGTGG
TAGTTGAAACATCGCACCGCCGTTTGATTCTCTCTCTTATCTATCCGACT
GTAGCACGGATTCGCAATTTGGTCATCACCACGTCCTGGCCGAGGAGGCT
GCTGACGAGGAGGCACCAGCGGACCTGCCTTCCTTGGGCCTGgtaagaaa
taacatgtacataaacttgtttgattgcttttgcgtttacttcgactgtc
aacacccgtacagcttttttacagcatcttcatttgtacttttcccatca
cttagGATGTAAGGGCACTAGCGGAAGGGCTGATATGCTTGCCTGCGCAT
GTCCGCCTCGGGGGTGTGGACCCGGCCTTGACGGTAGGAAGGGTTGGGCA
GGGAAGAAGAGAGCAGTCGGCACGAACCCGCAATCCATCCGTCCTTTTTA
TGTTTGCTTTTGCCATTATTATTTGCTCTTGTTCTTTTTCCTTGTGTCGA
AACAGGAGGGGTTGATGTTCCGGCAGGGATACCCGCCACCGAACGAGGGC
CAAACCCCAGCACCACCACCCAAGCTATTAGCTGAGCTCGTCGGCAGTCT
GACAAGCGCAAACACGGACAAGCACTTCGTGACCGACACCACAATATCCA
CCGCTCCGCCTTTGCCCTCCTTGGAGCCACCGCTCGAGGCGCTTTTGGGT
CTCGAGCTGTCGTCGTCCACTATCGAAGAGGAAAAGAAAACGGGGGGGGC
AGTAAAGGCAGCTGCAACGCCCTCATCTAGTTCATCTGCGCTTCTTACAT
CCGATCTGGACGATCTCTTAAACATAAGCTTAAAATCACGGAAAAGCGTT
GGAGATGGGATTAGTGGTGGTGACGGAAAAAAGGCGCCCAGCAACGAGGA
AGAAGTCGACGGTCCAATTTCCTCTGCTGCTTTTTCAAGCAAGGCAAAGA
AGTTGTCCGCGCTGGATGCGGGCGATTATTAAAAGATAAAAGAAATAATC
ACAGAATGCATCAAAAACTCCATGTT
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protein sequence of NO01G02660.1

>NO01G02660.1-protein ID=NO01G02660.1-protein|Name=NO01G02660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MGRSQLQYNRRARGRGRAGGRGPAGGPSGRGGGGGGRVASAKASQKAALR
QLPSNQDRFRQGDGGGSLGGEGRLLSDSEGGDDLRVYAWGTDSQFGHHHV
LAEEAADEEAPADLPSLGLDVRALAEGLICLPAHVRLGGVDPALTEGLMF
RQGYPPPNEGQTPAPPPKLLAELVGSLTSANTDKHFVTDTTISTAPPLPS
LEPPLEALLGLELSSSTIEEEKKTGGAVKAAATPSSSSSALLTSDLDDLL
NISLKSRKSVGDGISGGDGKKAPSNEEEVDGPISSAAFSSKAKKLSALDA
GDY*
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protein sequence of NO01G02660.2

>NO01G02660.2-protein ID=NO01G02660.2-protein|Name=NO01G02660.2|organism=Nannochloropsis oceanica|type=polypeptide|length=216bp
MLACACPPRGCGPGLDGRKGWAGKKRAVGTNPQSIRPFYVCFCHYYLLLF
FFLVSKQEGLMFRQGYPPPNEGQTPAPPPKLLAELVGSLTSANTDKHFVT
DTTISTAPPLPSLEPPLEALLGLELSSSTIEEEKKTGGAVKAAATPSSSS
SALLTSDLDDLLNISLKSRKSVGDGISGGDGKKAPSNEEEVDGPISSAAF
SSKAKKLSALDAGDY*
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Synonyms
Publications