NO01G02360, NO01G02360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_005856305.1 (poly rna polymerase, partial [Nannochloropsis gaditana CCMP526] >EKU20055.1 poly rna polymerase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 612.1 bits (1577), Expect = 4.600e-171 Identity = 438/788 (55.58%), Postives = 500/788 (63.45%), Query Frame = 0 Query: 696 DGRKEWGENCGHHMPHRYSAAVIPQVSLYDCLNRHQRHHHDNPQLQHQQRAPHRHVGGDGGRSGSSTMDGGVYESVMPPPLVMQQAHEVYALDLEAEKAHHAYCQGIDAMRALLTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANT-------TPQMTR------HLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSL-PTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVAQANVLAIARSVDTIKRRAIPPVPSNSXXXXXXXXXXXXXXXXXXXVRSRSKGVTIPADRDKTSRRLHSSGNPVPDGPMDYGKALRGGNGPLEEPVTAETTLMEVKPPPPLVKGGYGSPAEISYRLWSQFAAAQMTSDGGMEDRNDGGGKGVESADGNSEKKGMTSGFLLTYFLEYFGRIFNPQVEGIAVDQGYGLTFPLADFFLTHGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQVLFQQCLASLEAHGIEMGRRILQAPAAEDGWSHVGGXXXXXXXXXXXXXXXXXXQWQGQAPMNPVPLPPTADVLSLMLSY 1470 DG W E H + +Y P + H ++ H LQ Q+R + DG G++T G +ESV+PPPLV+QQ HE+YALD+EAE+A AY QGIDAMR+ L++NIA FM RE M HRAARE +L E+R+IIQ LW+G+RVELYGSCFTGLDL+SSD+D+VVCGL G+ + TPQM+R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSR LPPGH ES RLLYQLA LE R W+RS+KTIDTAF+PVIKILADPA L +SL P AT LVPVDIS EG QHGGIASSLLIRDLV PG+PYAHAVPLTLVLKAL+ QRGLNQPWCGG+SSYALMLMVI VLQQFE PE AQANV+AIARSVD IKRR + S+ + S+ K S+R +S N +G MDYGKA+RG LE+ V EV+PPPPLV GGYGSPAE+SYRLWSQFAAAQ TS+G M + ++ G + NS + +GFLLTYFLEY+GRIFNPQ EGIAVDQGYGLTFPL +F GLPVVADPLTILDPLDRAVNVSRCAFRIGEIQ LFQQCL +LE G+EM R +L PA ED WSHVG Q Q + VP P DVLSL+L Y Sbjct: 890 DGSDGWKECNDHRVVFQY-----PLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDG--YGTTT---GDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSR-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTLVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHSISSK---------EGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQ-TSEGRMAEGHEAG-----KQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGS---GGGVGKRKKSKGTNGQRQPTNSTSSVPTPKN-DVLSLILGY 1647
BLAST of NO01G02360 vs. NCBI_GenBank
Match: EWM29150.1 (poly rna polymerase [Nannochloropsis gaditana]) HSP 1 Score: 611.7 bits (1576), Expect = 6.000e-171 Identity = 440/793 (55.49%), Postives = 503/793 (63.43%), Query Frame = 0 Query: 696 DGRKEWGENCGHHMPHRYSAAVIPQVSLYDCLNRHQRHHHDNPQLQHQQRAPHRHVGGDGGRSGSSTMDGGVYESVMPPPLVMQQAHEVYALDLEAEKAHHAYCQGIDAMRALLTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANT-------TPQMTR------HLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSL-PTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVAQANVLAIARSVDTIKRRAIPPVPSNSXXXXXXXXXXXXXXXXXXXVRSRSKGVT-----IPADRDKTSRRLHSSGNPVPDGPMDYGKALRGGNGPLEEPVTAETTLMEVKPPPPLVKGGYGSPAEISYRLWSQFAAAQMTSDGGMEDRNDGGGKGVESADGNSEKKGMTSGFLLTYFLEYFGRIFNPQVEGIAVDQGYGLTFPLADFFLTHGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQVLFQQCLASLEAHGIEMGRRILQAPAAEDGWSHVGGXXXXXXXXXXXXXXXXXXQWQGQAPMNPVPLPPTADVLSLMLSY 1470 DG W E H + +Y P + H ++ H LQ Q+R + DG G++T G +ESV+PPPLV+QQ HE+YALD+EAE+A AY QGIDAMR+ L++NIA FM RE M HRAARE +L E+R+IIQ LW+G+RVELYGSCFTGLDL+SSD+D+VVCGL G+ + TPQM+R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSR LPPGH ES RLLYQLA LE R W+RS+KTIDTAF+PVIKILADPA L +SL P AT VPVDIS EG QHGGIASSLLIRDLV PG+PYAHAVPLTLVLKAL+ QRGLNQPWCGG+SSYALMLMVI VLQQFE PE AQANV+AIARSVD IKRR + S+ R+ +G IP+ K S+R +S N +G MDYGKA+RG LE+ V EV+PPPPLV GGYGSPAE+SYRLWSQFAAAQ TS+G M + ++ G + NS + +GFLLTYFLEY+GRIFNPQ EGIAVDQGYGLTFPL +F GLPVVADPLTILDPLDRAVNVSRCAFRIGEIQ LFQQCL +LE G+EM R +L PA ED WSHVG Q Q + VP P DVLSL+L Y Sbjct: 1168 DGSDGWKECNDHRVVFQY-----PLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDG--YGTTT---GDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSR-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSD--------------EKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQ-TSEGRMAEGHEAG-----KQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGS--GGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKN-DVLSLILGY 1926
BLAST of NO01G02360 vs. NCBI_GenBank
Match: CBJ27910.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 123.2 bits (308), Expect = 6.500e-24 Identity = 103/343 (30.03%), Postives = 140/343 (40.82%), Query Frame = 0 Query: 816 FMAKREADMKTHRAAREMVLGELRTIIQGLWSGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAV----------LMGVPDSLPTPATAL--VPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFE 1147 FM K M+ R A V+ +R ++ G+W ARVE+YGSCFTGL+L SSDVD+VVCG++ + + GSR A SS+ ++ L +LA L+ + WVR +K I+TA +PVIKILADP D + L +P+DISFE QHGGIASS +RD + G+ Y A+P +VLK ++ QRGLNQPW GG+SSY+L+ M+I VLQ+ E Sbjct: 1430 FMQKLGRAMRPRRRAWSQVIARVRELVSGIWKEARVEMYGSCFTGLELPSSDVDVVVCGIN-----------------------------------------------------------------------------------------GLKYSYGGSR------------------AGYSSM----------------QTVANLQKLANVLQEQTWVRGMKVIETAAVPVIKILADPVSNGNGQFMFDDSRNGRDGWLGGGSGLDYIPLDISFESPQHGGIASSKWVRDCIQGGK-YGFALPAVMVLKEILCQRGLNQPWSGGLSSYSLINMMITVLQRAE 1648
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_009037116.1 (hypothetical protein AURANDRAFT_64151 [Aureococcus anophagefferens] >EGB08400.1 hypothetical protein AURANDRAFT_64151 [Aureococcus anophagefferens]) HSP 1 Score: 106.3 bits (264), Expect = 8.200e-19 Identity = 198/731 (27.09%), Postives = 258/731 (35.29%), Query Frame = 0 Query: 804 AMRALLTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSGARVELYGSCFTGLDLVSSDVDIVVCGLSL--TGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPA-------------------------------------------------GSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVP---------------------------DSLPTPAT------------------------------------------------ALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFETPEVAQANVLAIARSVDTIKRRAIPPVPSNSXXXXXXXXXXXXXXXXXXXVRSRSKGVTIPADRDKTSRRLHSSGNPVPDGPMDYGKALRGGNGPLEEPVTAETTLMEVKPPP-----PLVKGGYGSPAEISYRLWSQFAAAQMTSDGGMEDRNDGGGKGVESADGNSEKKGMTSGFLLTYFLEYFGRIFNPQVEGIAVDQGYGLTFPLADFFLTHGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQVLFQQCLASLEAHG 1404 AMR+ L + F+A E M R AR VL E+ +++ +WS A LYGSC TGLDL SSDVD+VV GL+ T + P+ XXXXXXXXXXXXXXXXXXX XXXX +PA G P + L PA + + TPP PG S + LAA L PWVR LK I+TA IPVIK+LADP+VL G P LP P T L+ VDISFE HGG+ASS + ++ + PL LVLK L+ QRGLN+P+ GG+SSY+L+L+V+ L Q + P+ +P R T P+ D P +A P + P + ++ P PL GG + L S+ G E R +K G+LLT+FLE+FGR F+PQ ++V +G +A VA PL I DPL+ + NV+R F I +IQ +F CL LE+ G Sbjct: 583 AMRSRLAYDANDFVASLERAMAPQRRARTAVLDEVSQVVRSIWSHAECSLYGSCLTGLDLPSSDVDVVVRGLNCDPTPNPPGAAPRRADAXXXXXXXXXXXXXXXXXXXXXXXXGDRGNGARRQATPPKAAAPRLPRIDSGEAVXXXXXXXXXXXXXXXXXXXXXRPDSPARLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGHKP---NYVGQQFLPPAQCYGQFPVYMRAPTPPTGPNPGVVLSVK---TLAAALADLPWVRELKAIETANIPVIKLLADPSVL-GCPLPEFKRNRRRACSEDAAQALAETASPCGDLPLPDTRRRPQAVAGDAAXXXXXXXXXXXXAETVDAGPGEAAPTWCGAVGRCDAGLLAVDISFEAPDHGGLASSRYALEAMS---RWPELAPLMLVLKELLVQRGLNEPFTGGLSSYSLLLLVMTALLQ-----------------------AGVEPLED-----------------------------PLPEPRHMT---------PLEDRP--EAEAPEEPPKPAKPPTSVREAWARLRDDPRRAKAPLRDGGSAAGGRRRPSLASRIRGGDALLWNGAESR------------AAFDKDDDALGYLLTFFLEFFGRHFDPQRHAVSVLRGDAGIIAMAGPGYADANQWVA-PL-IEDPLECSRNVARSCFAIAQIQNVFAHCLCILESKG 1226
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_002289351.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92888.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 93.2 bits (230), Expect = 7.200e-15 Identity = 154/409 (37.65%), Postives = 207/409 (50.61%), Query Frame = 0 Query: 809 LTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSGA-RVELYGSCFTGLDLVSSDVDIVVCGL------------SLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLY------------------QLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGV-------------------------------PDSLPTPATA-----LVPVDISFEGRQHGGIA----SSLLIRDLVAPGRPYAHAVP---LTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQ 1144 L++ I TFM +R + R R VL L+ + +W G+ VE+YGSC T LDL SSD+D+VVCGL S+ S +N+ P + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX V G SP + S ++ + S + ++ P + + + Y +LA LE +PW +K I TA +PV+K+LADP+ L GV P S+PT A L P+DI+FEG +HGGI S+ +++D + P + +VLK L+ QR LN+P+ GG+SSYAL+L+++AVL+ Sbjct: 926 LSEEINTFMYRRSLALDIRRKERSAVLSALQDTLGRIWPGSCHVEMYGSCATELDLPSSDLDLVVCGLDDINMMHIPMDNSIPNSPSNSGPNLMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXLEELEVGHE----GEASPRHPDDSPSEQIDAEDMMYDESGMDVNMMGMEQYSPDYHVNQQEFYYVPYNYVSPMALNAQRVLRLAHELEMQPWAVQVKAIPTATVPVVKMLADPSRLPGVAGSGGNWMEQHIAAQAGVPPADQMKPSHFFPPHSMPTWRGADIMNGLQPIDITFEGPEHGGIGSTTYSACVVQDACKETNLPPESTPVVQVAMVLKELLAQRRLNEPFSGGLSSYALLLLLLAVLK 1330
BLAST of NO01G02360 vs. NCBI_GenBank
Match: OEU22639.1 (hypothetical protein FRACYDRAFT_232797 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 92.4 bits (228), Expect = 1.200e-14 Identity = 124/414 (29.95%), Postives = 171/414 (41.30%), Query Frame = 0 Query: 788 DLEAEKAHHAYCQGIDAMRALLTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLWSG-ARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGV------------------PDSLP---------------------------------TPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVP-------LTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVL 1143 +L + + C +D L T+ I+ FM +REA ++ R R +VL L + +W G VE+YGSC T LDL SSD+D+VVCGL R LE XXXXXXXXXXXXXXXX + S++ D + + L S L P S S MS + + + + +LA LE +PW +K I TA +PVIKILADPA L G P S+P L+ VDI+FEG +HGGI S++ + +V P + +VLK L+ QR LN+P+ GG+SSYAL+L+VI+++ Sbjct: 1059 NLSRQSENDVGCHLLDVCDRLSTE-ISEFMKRREAALEIRRHERGLVLAALEKTLGLIWPGMPSVEMYGSCATNLDLPSSDLDVVVCGLD-------------RPLE----------------------------------AIPSXXXXXXXXXXXXXXXXPKSVGDSSKVEDDA------------HKEEGLPEIDSHHDLSPYGSDQRYSSHQMSPHHMQMMYGHMSMNAERVLRLAMELEHQPWAVHVKAIPTASVPVIKILADPARLQGAILNGSADWLVQQPMNGQSPTSMPPHGRSDNVDSHSGNQAPKSHYSSQQSSPLWRGADVVNGLLKVDITFEGPEHGGIGSTVFSKQVVQDFSNETELSPECTPHVQVLMVLKELLAQRRLNEPFSGGLSSYALLLLVISMI 1412
BLAST of NO01G02360 vs. NCBI_GenBank
Match: GAX09922.1 (hypothetical protein FisN_11Lh093 [Fistulifera solaris]) HSP 1 Score: 91.3 bits (225), Expect = 2.700e-14 Identity = 98/394 (24.87%), Postives = 156/394 (39.59%), Query Frame = 0 Query: 809 LTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLW-SGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDS---------LPTPATA---------------------------------------LVPVDISFEGRQHGGIA----SSLLIRDLVAPGRPYAHAVPL---TLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFE 1147 L+ ++ FM++R + R R +L L+ ++ +W + VE+YGSC T LDL SSD+D+V+ GL T + IH+ + + SS + + P ++++ + + L P + + P PL + R+L +LAA LE +PW + I TA +PV+K+L DP+ L+G S L T A A L+ +DI+FEG +HGGI S+ ++ D A PL +VLK L+ QR LN+P+ GG+SSYAL+L+V+A+L++ E Sbjct: 827 LSRDMCLFMSRRALALGARRRERGAILYALQDVLSKIWPNSCHVEMYGSCATQLDLPSSDLDVVIMGLDRTQNMI--------------------------------------------------------------------IHAAPPIPEIPSSPLVHKVRPV---KASMNATSGTSNLKPQALVKQHQVPSYPSFIPLPL---QSNADRVL-RLAAELELQPWAVQVNAIPTASVPVVKVLCDPSRLVGGTISGDWMTHHQHLATDAAAAAGQSLKDVNKDKDSRSKQQLHSPPQPMLSWRGSDVMNGLLKLDITFEGPEHGGIGSTQFSARVVNDACLQANVAPDATPLVQVVMVLKELLVQRKLNEPYSGGLSSYALLLLVVALLRERE 1145
BLAST of NO01G02360 vs. NCBI_GenBank
Match: XP_002176959.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51422.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 87.4 bits (215), Expect = 4.000e-13 Identity = 103/407 (25.31%), Postives = 152/407 (37.35%), Query Frame = 0 Query: 809 LTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLW-SGARVELYGSCFTGLDLVSSDVDIVVCGLS-LTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRPLPPGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVP------DSLPTPA----------------------------TALVPVDISFEGRQHGGIASS-LLIR---------DLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQ-----FETPEVAQANVLAIARSVDT 1165 L+ ++ FM++R + R R +LG L+ + LW + +VELYGSC T LDL SSD+D+VV GL G+ Q L+ + SD V + ++A+ P +P + + +LAA L +PW +K I TA +PV+K+LADP L V D P A L+ DI+FEG +HGGI S+ IR L G P+ V + +VLK L+ QR LN+P+ GG+SSYAL+L+V+++L++ E V Q A ++DT Sbjct: 872 LSQDMRLFMSRRSQALNARRKERVALLGALQNSVAKLWPASCQVELYGSCATHLDLPSSDLDVVVVGLDRRRGTLMQVGTQNNGCLDGK----------------------------------------------------------MESKSDFDVDDVRQK--------------------------------ILNASLPPYIPTSTSLNAERIKRLAAELATQPWAVQVKAIPTASVPVVKVLADPYRLQNVSGNDWKLDKHPKIAAETSKVSQVSSDSARLQSFQPWRGADAMNGLLSFDITFEGPEHGGIGSTEFSIRTVNEACRETGLPPEGTPF---VQVIMVLKELLAQRKLNEPYSGGLSSYALLLLVVSLLRERTVIREELDRVEQQRQAVAADTMDT 1185
BLAST of NO01G02360 vs. NCBI_GenBank
Match: GAX14448.1 (hypothetical protein FisN_11Hh093 [Fistulifera solaris]) HSP 1 Score: 76.3 bits (186), Expect = 9.100e-10 Identity = 98/397 (24.69%), Postives = 148/397 (37.28%), Query Frame = 0 Query: 809 LTDNIATFMAKREADMKTHRAAREMVLGELRTIIQGLW-SGARVELYGSCFTGLDLVSSDVDIVVCGLSLTGSTANTTPQMTRHLEQRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIHSHSQLSDTSSSSVATRSTPAGSRSPALSSPASSPRLGPATSASNSSIIFMSATPPRP--LP-PGHGESTRLLYQLAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDS---------LPTPATA---------------------------------------LVPVDISFEGRQHGGIA----SSLLIRDLVAPGRPYAHAVPL---TLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQFE 1147 L+ ++ FM++R + R R +L L+ ++ +W + VE+YGSC T LDL SSD+D+V+ GL T + IH+ + + L P A + PP P +P P + R+L +LAA LE +PW + I TA +PV+K+L DP+ L+G S L T A A L+ +DI+FEG +HGGI S+ ++ D A PL +VLK L+ QR LN+P+ GG+SSYAL+L+V+A+L++ E Sbjct: 850 LSRDMCLFMSRRALALGARRRERGAILYALQDVLSKIWPNSCHVEMYGSCATQLDLPSSDLDVVIMGLDRTQNMM--------------------------------------------------------------------IHAAPPMXXXXXXXXXXXXXXXXXXXXXXXXXXN---LKPQAPAKQHQV------PPYPSFIPLPIQSNADRVL-RLAAELELQPWAVQVNAIPTASVPVVKVLCDPSRLVGGTISGDWMAHHQHLATDAAAAAGQSLKDGIKDKDSRSKQQLHSPPQPLLSWRGSDVMNGLLKLDITFEGPEHGGIGSTQFSARVVNDACLQANVAPDATPLVQVVMVLKELLVQRKLNEPYSGGLSSYALLLLVVALLRERE 1168
BLAST of NO01G02360 vs. NCBI_GenBank
Match: GBG32713.1 (PolyA RNA polymerase cid14 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 75.9 bits (185), Expect = 1.200e-9 Identity = 45/122 (36.89%), Postives = 72/122 (59.02%), Query Frame = 0 Query: 1024 LAATLECRPWVRSLKTIDTAFIPVIKILADPAVLMGVPDSLPTPATALVPVDISFEGRQHGGIASSLLIRDLVAPGRPYAHAVPLTLVLKALMTQRGLNQPWCGGVSSYALMLMVIAVLQQF 1146 LA L + WV+ +++++ +PVIK+ +P S +L+ VDI+F+ H G+ + L+R L+A Y PLTLV+K + +GLN P+ GG+SSY L+LMV A+LQ++ Sbjct: 736 LADHLRGQSWVQMIQSVEHTSVPVIKL-----ATAQIPISFGNQG-SLINVDITFDSYSHTGLRTCALVRRLMA---SYPPLKPLTLVIKQFLVVKGLNDPFVGGLSSYGLVLMVTAILQRW 848 The following BLAST results are available for this feature:
BLAST of NO01G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02360 ID=NO01G02360|Name=NO01G02360|organism=Nannochloropsis oceanica|type=gene|length=4410bpback to top protein sequence of NO01G02360.1 >NO01G02360.1-protein ID=NO01G02360.1-protein|Name=NO01G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1470bpback to top Synonyms
Publications
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