Naga_100007g88, gene1441 (gene) Nannochloropsis gaditana

Overview
NameNaga_100007g88
Unique Namegene1441
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:765242..771580 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g88
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:765242..771580 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL086ngnoL086Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02360NO01G02360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1493rna1493-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1493rna1493Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1493

>rna1493-protein ID=rna1493-protein|Name=rna1493|organism=Nannochloropsis gaditana|type=polypeptide|length=1926bp
MTHDSTWQQATLLSSLWEWFSELRPDERMQALTIDDPLWIRLYLKLFKHE
LKSRNKKPGRHLQQQHEQQEQQRGPSSLSASCPSLVGTHSPPKQQQQHPP
SCYTVKRDKINYMYGRLLKQQQQQHAAASAGNGSRALAAWGAAGDLDDLE
ENKGMEEDDDELDFALAAEEEEHSLIEGYRIPWSQQGDVRKRAGRKGERS
NSDIDGNDMKREQGSQVTLMCADRLLQRSLRVCTLGATPLDTLTLSQPAV
EDAEALYQLLRAVTDGAFLSKPLPTATAKQLSLQSSAVAAISGGGPGLSA
AAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKE
TIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQE
FALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDG
SGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELL
MEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTS
LPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRRKIKGEDG
VVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQGDLWEEVG
RRGTVMKNPSLPPSLTSKTASAHMNSKSGDSSKQVTSKLSDTEVKDTFLQ
PCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSA
PLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSP
SHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDAD
PTPSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENA
PPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKV
DQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGPLKPKYYRDGQRVDKAS
MNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCQP
LASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNG
RAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVE
LCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQY
RHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALD
MEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEV
RSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSAL
SIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTT
SNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSR
SPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAG
ALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVD
ISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPW
CGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSS
SDEKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKA
VRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQ
TSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAV
DQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQY
LFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKSKKGTD
GQRQPTNSTSSVPTPKNDVLSLILGY
back to top
Synonyms
Publications