NO01G01990, NO01G01990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_002909805.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY62096.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 86.7 bits (213), Expect = 2.200e-13 Identity = 76/275 (27.64%), Postives = 123/275 (44.73%), Query Frame = 0 Query: 110 LALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGL-LRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------GSSWDP-----------PAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLL 364 L LL+ EW + ILP +F++Y H I HN YY+Q + L DLG L+ E W + L+ +F+ + L LT+ + GR P + + ++R +S+ + R I+FLVT +P PA++C + DP P +GE+F+R+ CGDLMFS HT + + +L V K+ PN ++ + +T +A ++A + HY+ DV A+Y+ + W L Sbjct: 21 LQLLAREWKI----ILPC----------VFMQYAHAIFHNLAYYIQAHYLSTE-QRFTLHDLGYELMG----ELTGWASDLSDILVFTTIFAPAIALVLTIPL---------FRQEPGR-----PRYLVITLKRCLLQLSICLVFRCISFLVTALPGPADHCELKFNDTCLAANPDDPVPCVVPNPEFTPPTIGELFTRLDSLNGCGDLMFSSHTIYTVSFILTVWKYWPNKYGISIMVLVQIT-IAFLIVASRKHYTLDVFSALYIVPLFWLAL 261
BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_008871059.1 (hypothetical protein H310_07470 [Aphanomyces invadans] >ETW00034.1 hypothetical protein H310_07470 [Aphanomyces invadans]) HSP 1 Score: 86.3 bits (212), Expect = 2.800e-13 Identity = 79/268 (29.48%), Postives = 118/268 (44.03%), Query Frame = 0 Query: 131 LFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH------------------------GSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLLPRDAASIKLAD 375 L F + W +Y+H I HN Y++Q KL A PL DLG L LPE E + L+ G +F +L V +K S + P L+ +R ++ + LR I+F+VT +P PA +C + PP G IF V CGDLMFS HT++ + ++L V K+ ++ VL + + A ++A + HYS DV+ A+YV M+W+LL + AD Sbjct: 34 LLFGLAW---QYIHNIFHNTAYWMQSKLSLAQ--RMPLYDLGFEL----LPELTESEAHVSEYLVFGGIFGPSILLFVSVLV--------IKPSS---PSAPPRFFSLIAKRVLLQTALCLMLRCISFMVTSLPGPAAHCRPTFNQTCIDAFPNDPSASFRCVVPNPDFQPPMTAGTIFGHVDALNGCGDLMFSSHTTYTLSMILAVWKYWRSV-PLLVLMLVLQIITAFFIVAARKHYSLDVIAALYVVPMVWFLLEAYHKDLNHAD 280
BLAST of NO01G01990 vs. NCBI_GenBank
Match: POM64015.1 (Transmembrane protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 86.3 bits (212), Expect = 2.800e-13 Identity = 82/272 (30.15%), Postives = 124/272 (45.59%), Query Frame = 0 Query: 110 LALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSD-GRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------GSSWDP-----------PAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIW 361 L LL+ EW + ILP +F++Y H I HN YY+QG + L DLG L +PE I GFA+ L L+F +G I V T R + P + +V++R +S+ + R I+FLVT +P+PA++C + DP P V E F+R+ CGDLMFS HT + + L+L + K+ PN ++ V +A ++A + HY+ DV A+Y+ + W Sbjct: 21 LQLLAQEWKI----ILPC----------VFMQYAHAIFHNLAYYIQGHYLSTE-QRFTLYDLGYEL----MPE----IHGFASHLSDILVFP----------AIFGPAIILVLTIPLFRQEPGRPRYLVIVLKRCLLQLSICLIFRCISFLVTALPSPADHCELKFDDACLAANPNDPVPCVIPNPEFNPPTVSEWFTRLDSLNGCGDLMFSSHTIYTVSLILTMWKYWPNKYGITIM-VSMQIAIAFLIVASRKHYTLDVFSALYIVPLFW 258
BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_002291567.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91674.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 85.5 bits (210), Expect = 4.800e-13 Identity = 77/260 (29.62%), Postives = 114/260 (43.85%), Query Frame = 0 Query: 128 KSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLP--ESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYC----------------------HGSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLL 364 ++ L F++ F ++ H N YY +L A+ PL+DL D LP + WII L L S+ + TL V W P GR P+ ++RR V TLR+I+FLVT +P + C + + W PP + ++ RV T CGDLMFS HT + M + VV K+ N ++ KV+ + +LA + HYS DV A+YV +++ LL Sbjct: 262 RTDLLFILFITFYQFFHSAVTNVAYYQHAQLNAAN--RVPLKDLAF----DMLPPLDGDLWIIS-EYILFAILAISISCILSTLV-VRWNAP-------HGR-----PIYAVQIVRRLGMTWIVCQTLRMISFLVTTLPGASRQCRYAVPDELTAFEMLNGPAPDGGNPAGWAPPTTLQDVLFRVDATNGCGDLMFSSHTIYTMSFVCVVFKYF-NFKSLKVIMALLQISIVPFILAARKHYSVDVFTALYVTPLVFELL 500
BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_009836809.1 (hypothetical protein H257_11531 [Aphanomyces astaci] >ETV73873.1 hypothetical protein H257_11531 [Aphanomyces astaci]) HSP 1 Score: 84.7 bits (208), Expect = 8.200e-13 Identity = 72/257 (28.02%), Postives = 112/257 (43.58%), Query Frame = 0 Query: 131 LFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH------------------------GSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLL 364 + F + W +Y+H I HN Y++Q KL A PL DLG L LPE E + L+ G +F ++ + +K L+ +R ++ + LR I+F+VT +P PA +C + PP VG I V CGDLMFS HT++ M ++L V K+ ++ V+ V + A ++A + HYS DV+ A+YV M+W++L Sbjct: 34 VLFGLAW---QYIHNIFHNIAYWMQTKLSVAQ--RVPLYDLGFEL----LPELSESASHVSEYLVFGGIFGPSIVLFV--------SVLFIKAXXXXXXXXXXXXXALIFKRVLLQTALCLMLRCISFMVTSLPGPASHCRPLYNQTCLDAFPSDPTASYRCVVGNPDFQPPMTVGSILGHVDALNGCGDLMFSSHTTYTMSMILAVWKYWGSVPVLVVMLV-LQVVTAFFIVAARKHYSLDVISALYVVPMVWFML 272
BLAST of NO01G01990 vs. NCBI_GenBank
Match: OWZ11890.1 (Sphyngomyelin sunthetase [Phytophthora megakarya]) HSP 1 Score: 84.7 bits (208), Expect = 8.200e-13 Identity = 83/276 (30.07%), Postives = 123/276 (44.57%), Query Frame = 0 Query: 110 LALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDG--RVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------GSSWDP-----------PAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLL 364 L LL+ EW + ILP + ++YVH I HN YY+QG + L DLG L +PE I GFA L L+F+ GP I + + R + P + +V++R +S+ + R I+FLVT +P+PA +C + DP P V E F+R+ CGDLMFS HT + + +L V KF PN ++ V +A ++A + HY+ DV A+Y+ + W L Sbjct: 21 LQLLAQEWKI----ILPC----------VIMQYVHAIFHNLAYYIQGHYLSTE-QRFTLYDLGYEL----MPE----IHGFAADLSDILVFAAIF-----------GPAIVLVLTIPLFRQEPGRPRYLVIVLKRCLLQLSICLIFRCISFLVTALPSPAAHCELKFDETCLAANPNDPVPCVIPNPEFNPPSVSEWFTRLDSLNGCGDLMFSSHTIYTVSFILTVWKFWPNKYGITIM-VSIQIAIAFLIVASRKHYTLDVFSALYIVPLFWLTL 261
BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_002782284.1 (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >EER14079.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 79.3 bits (194), Expect = 3.500e-11 Identity = 72/259 (27.80%), Postives = 116/259 (44.79%), Query Frame = 0 Query: 138 IFVEYVHLIAHNYVYYLQG--KLWGA-DGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCHGSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIW----WLLPRD----AASIKLADLQLDDHLPLPP 386 +F VH HN YY G +++G GP + D G FEW F TA + G G + L +T I + + + + P ++ R +T R I+F+ TL+P+ A++C +DPP + GEIF+ V +G C DL++SGH + ++ + ++A N K + L ++A +AHYS DV+VA Y W + +P D A I+ L ++ P+ P Sbjct: 5 LFSLLVHNWVHNMAYYYAGIYQVYGPYKGPSNRIHDFG-----------FEW---FGTAFV-GWSTPPGDIVLYIT------LAIAIVYALRPLVFSFPTRTLNILWRVLTMSIFTVTGRCISFIFTLLPSSAQHCAEDEFDPPKNWGEIFTHVSVSGGCSDLIYSGHMMYAILATCAIFRYAQNW-YIKATCLALNILQGFVIVASRAHYSVDVIVAAYTIPAFWCTFAYFVPEDIGPNAVPIEKTSLAAEEGPPVDP 241
BLAST of NO01G01990 vs. NCBI_GenBank
Match: OQR96867.1 (hypothetical protein THRCLA_07145 [Thraustotheca clavata]) HSP 1 Score: 76.3 bits (186), Expect = 2.900e-10 Identity = 67/253 (26.48%), Postives = 114/253 (45.06%), Query Frame = 0 Query: 131 LFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------------------GSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWL 363 L + + W +Y+H I HN Y++QG+L PL DLG L LPE + + L+ G +F+ +L + P I ++G V+ V ++++R S+ + R ++FLVT +P A +C + PP F + CGDLMFS HT + M +L V K+ ++ + ++ + +A ++A + HY+ DV+ A+Y+ MIW+L Sbjct: 34 LLYGLAW---QYIHSIFHNLAYWIQGRL--TIEQRTPLYDLGYNL----LPEFTDAQASISEILVFGFIFAPSVLLVCTV------PFIK-PVANGNVRY-----VAVIVKRFLFHTSICLFFRCVSFLVTALPGAAPHCRPLYNQTCLDSNPINSLECVIPNPDFQPPTTTSYFFFHINALDGCGDLMFSSHTMYTMSFILAVFKYWKSV-SLLIVMLCIQIAIAFCIVAARKHYTLDVVSALYIVPMIWFL 264
BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_012205002.1 (hypothetical protein SPRG_09859 [Saprolegnia parasitica CBS 223.65] >KDO24225.1 hypothetical protein SPRG_09859 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 75.9 bits (185), Expect = 3.800e-10 Identity = 75/282 (26.60%), Postives = 119/282 (42.20%), Query Frame = 0 Query: 131 LFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------------------GSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLLPRDAASIKLAD-------LQLDDHLPLP 385 L F +LW +Y+H I HN Y++Q +L PL D+G L LPE E + L+ G +F ++ L P I K +G V+ V ++ +R ++ + R +FLVT +P A +C + PP F + CGDLMFS HT + M +L + K+ + A V + +A ++A + HY+ DV+ A+Y+ M+W+L A I D +Q H+P+P Sbjct: 34 LLFGLLW---QYLHNILHNLAYWIQSRLTPVQ--RTPLYDVGFNL----LPEFTESQAKVSEYLVFGCIFGPSIVLLASV------PFIKPK-ENGNVRY-----VAVIAKRFLFHTAMCLFFRCCSFLVTALPGSAPHCRPMFNQTCLDANPINPFSCEVPNPDFQPPTTTSYYFFHIDALNGCGDLMFSSHTMYTMTFILTLFKYWKS-TALLVFMLCIQIAIAFCIVAARKHYTLDVISALYIVPMVWFLQDAYFADINHKDQGVTPENIQKFYHMPMP 293
BLAST of NO01G01990 vs. NCBI_GenBank
Match: GAY02652.1 (Hypothetical protein PINS_010482 [Pythium insidiosum] >GAX99928.1 Hypothetical protein PINS_007752 [Pythium insidiosum]) HSP 1 Score: 73.9 bits (180), Expect = 1.500e-9 Identity = 69/254 (27.17%), Postives = 114/254 (44.88%), Query Frame = 0 Query: 134 LILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEW----IIG--FATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYC---------HGSSWDPPAHV-----------GEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWW 362 L+ + ++YVH + HN Y++Q PL DLG L+ + + W + G FA A+L L+ S+ L R + P V ++++R +SV ++ RI +FL+T +P PA +C + DP V E+F+++ CGDLMFS HT + + +L V K+ P+ + L V +A ++A + HYS DV A+YV ++W+ Sbjct: 31 LLPCVIMQYVHGVFHNLAYWIQEHKLELI-QRYPLYDLGFELMPELSETNAHWSEYLVFGGVFAPAIL--LVLSVPLFRQNPKH---------------------PRYVAIILKRVLLHISVALSFRIASFLLTALPGPARHCRLFFDETCRQNNLNDPLKCVIDNPDFKAPRGHEMFTKMDALNGCGDLMFSSHTIYTLSFILTVSKYWPS-KYLVGLMVSIQIAIAFLIVAARKHYSLDVFTALYVVPLLWF 259 The following BLAST results are available for this feature:
BLAST of NO01G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01990 ID=NO01G01990|Name=NO01G01990|organism=Nannochloropsis oceanica|type=gene|length=2593bpback to top protein sequence of NO01G01990.1 >NO01G01990.1-protein ID=NO01G01990.1-protein|Name=NO01G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bpback to top Synonyms
Publications
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