NO01G01990, NO01G01990 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G01990
Unique Name	NO01G01990
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2593
Alignment location	chr1:502528..505120 +

Link to JBrowse

Properties


Property Name	Value
Description	Heat shock protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:502528..505120 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025749	Sphingomyelin_synth-like_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Homology

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BLAST of NO01G01990 vs. NCBI_GenBank
Match: EWM29203.1 (heat shock protein [Nannochloropsis gaditana])

HSP 1 Score: 470.3 bits (1209), Expect = 7.000e-129
Identity = 233/356 (65.45%), Postives = 282/356 (79.21%), Query Frame = 0

Query:   45 PPASTAADSQESELEAGLGAKQDVRQRGVPNGGVERSNSGGHAQYHPTSHHSPPGRVAVKSEREMLALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCHGSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLLPRDAASIKLADLQLDDHLPLPPTPTFLSVPPLSAAAS 401
            P A TA  S+  +LEAG+ +KQD RQR    G    +  G        SH +    V +KSEREM  LLSFEWAL+K+G+  S+ PLFF +LW+FVEYVHL AHNYVY+LQGK+WG DGPPPPL DLGLMLLADRLP+ +EWIIGFATA+L GLMFSLGLLRLTL +V WGGP I+V+ +D + KTTLPMPV LVM+RACQAMSVGM+LR++TFLVTL+PNPA YCHG  WDPP  VGEIF+R+RFTGSCGDL+FSGHTSHGMVLMLVV ++AP +RAAK L++G+MTLLA SLLAFK+HY+SDVLVA+YVN+MIWWLLP D A + L DL L++  PLP +P F+   P S++ +
Sbjct:  105 PAARTARGSRGVDLEAGMNSKQDARQRTFLRG--LETGQGSTGSQIGASHAA--SCVGLKSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCHGPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLPTDPARVNLTDLGLNNDFPLPVSPAFVCADPSSSSVT 456

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BLAST of NO01G01990 vs. NCBI_GenBank
Match: EWM22532.1 (hypothetical protein Naga_100290g2 [Nannochloropsis gaditana])

HSP 1 Score: 225.3 bits (573), Expect = 3.900e-55
Identity = 136/367 (37.06%), Postives = 195/367 (53.13%), Query Frame = 0

Query:    3 EDEDGTSTPATSTEETRRSKRDLSPFP-PSNYHDADASPARRLPPASTAADSQESELEAGLGAKQDVRQRGVPNGGVERSNSGGHAQY--HPTSHHSPPGRVAVKSEREMLALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTT--LPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCHGSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLLP 365
            ED  G+++     +E+  S     P P P  Y D         P    A  S    + A       V     P+G   R +    + Y  H          +  K  +E+      EWAL+K+          ++ ++   EY +LI HN+VY+L+GK+WGA GPPPPL DLG+M  A   P S+ W++GF   LL G++  L L RL L NV WG P   ++  +G    T  +P+P   + +RACQ +++G+ LR+++F+ TL PNPA+YCH   WDPP  + EI  R+   GSCGDL+FS HT H M +ML V + AP L     LAV SM ++  S+LAFK HYS D++ AIY ++++W L P
Sbjct:   16 EDAIGSASRVIEMQESTTSVESCLPAPIPLCYLDGSKDYKGETPRIVDACKSAGRRVSA-------VSILSPPSGPSPRLSEVSRSYYSNHRNRAWDSWKAIRCKKWKEIEWQGRLEWALLKQ-------EWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWMLTP 368

[Close]

BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_005855301.1 (heat shock protein [Nannochloropsis gaditana CCMP526] >EKU21057.1 heat shock protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 217.6 bits (553), Expect = 8.100e-53
Identity = 102/217 (47.00%), Postives = 142/217 (65.44%), Query Frame = 0

Query:  136 LWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTT--LPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCHGSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVL 351
            +++  EY +LI HN+VY+L+GK+WGA GPPPPL DLG+M  A   P S+ W++GF   LL  ++  L L RL L NV WG P   ++  +G    T  +P+P   + +RACQ +++G+ LR+++F+ TL PNPA+YCH   WDPP  + EI  R+   GSCGDL+FS HT H M +ML V + AP L     LAV SM ++  S+LAFK HYS D++
Sbjct:    1 MFLVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIAMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIV 217

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BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_024575218.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG38849.1 Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 96.3 bits (238), Expect = 2.700e-16
Identity = 81/272 (29.78%), Postives = 123/272 (45.22%), Query Frame = 0

Query:  110 LALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------------------GSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIW 361
            L LLS EW +    ILP           + ++YVH I HN  YY+QGK    +     L DLG  L    +PE   +    +  L+   +F   ++ +    +         +   GR     P  + +V++R+    S+ +  RII+FLVT +P  A++C                         +DPP+   EIF+R+     CGDLMFS HT + + L+L V KF PN R    + V     +A  ++A + HY+ DV  A+YV  +IW
Sbjct:   49 LQLLSKEWKI----ILPC----------VIMQYVHAIFHNLAYYIQGKYLSTE-QRFTLHDLGFEL----MPELTGFAADISEILVFAAIFGPAIILILTIPL--------FRQEPGR-----PRYLVIVLKRSLMQFSICLFFRIISFLVTALPGSADHCELKFDDSCLALNPGDPVSCVVPNPDFDPPS-TSEIFTRLNALKGCGDLMFSSHTIYTVSLILTVWKFWPN-RYGITIMVSVQIAIAFLIVASRKHYTLDVFTALYVVPLIW 286

[Close]

BLAST of NO01G01990 vs. NCBI_GenBank
Match: CCA24055.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 95.9 bits (237), Expect = 3.600e-16
Identity = 72/251 (28.69%), Postives = 120/251 (47.81%), Query Frame = 0

Query:  134 LILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------------------GSSWDPPAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLL 364
            L+  I ++Y+H + HN+ YY+QG +   +     L DLG  L    +PE        +  L+ G +F+  +L ++   V    P               P  + ++++R    +S+ + LRI +F++T +P+PAE+C                         ++PP  V + F+++     CGDLMFS HT + + L+L VCK+ P+     V+ V     +A  ++A + HYS DV  A+YV  MIW LL
Sbjct:   42 LVPCILMQYLHSVFHNWAYYIQGNVLSVE-QRVMLYDLGYAL----MPELTGTAAHLSEYLVFGAVFAPTILLISSVLVLKQNP-------------LRPRFIAIILKRLLLQISIALVLRICSFMITSLPSPAEHCRLVFDEACKAANPNDYMKCVIPNPDFEPPT-VSQFFTKIDALRGCGDLMFSSHTIYTLSLILSVCKYWPHPLLIGVM-VSVQIAIAFLIVASRKHYSIDVFTALYVVPMIWLLL 272

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BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_009517302.1 (hypothetical protein PHYSODRAFT_469105 [Phytophthora sojae] >EGZ30027.1 hypothetical protein PHYSODRAFT_469105 [Phytophthora sojae])

HSP 1 Score: 90.5 bits (223), Expect = 1.500e-14
Identity = 77/276 (27.90%), Postives = 129/276 (46.74%), Query Frame = 0

Query:  110 LALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSDG--RVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------GSSWDP-----------PAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLL 364
            + LL  EW +    ILP           + ++YVH I HN  YY+QG     +     L DLG  L+++        + GFA ++   L+F+              GP I +  +    R +   P  + +V++R    +S+ +  R I+FLVT +P+PA++C           +  DP           P  +GE+F+R+     CGDLMFS HT + + L+L + K+ PN     ++ V    ++A  ++A + HY+ DV  A+Y+  + W +L
Sbjct:   21 IQLLKQEWKI----ILPC----------VIMQYVHAIFHNLAYYIQGNYLTVE-QRFTLHDLGYELMSE--------LTGFAASISDILVFAAVF-----------GPAIVLVLTIPLFRQEPGRPRYLVIVLKRCLLQLSICLVFRCISFLVTALPSPADHCELKFNETCLAANPDDPVPCVIPNPDFNPPTIGELFTRLDSLTGCGDLMFSSHTIYTVSLILTIWKYWPNKYGITIM-VCVQIIIAFLIVASRKHYTLDVFSALYIVPLFWLVL 261

[Close]

BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_008897180.1 (hypothetical protein PPTG_05390 [Phytophthora parasitica INRA-310] >ETI34127.1 hypothetical protein F443_19294 [Phytophthora parasitica P1569] >ETK74497.1 hypothetical protein L915_18717 [Phytophthora parasitica] >ETL81166.1 hypothetical protein L917_18444 [Phytophthora parasitica] >ETM34361.1 hypothetical protein L914_18532 [Phytophthora parasitica] >ETN17641.1 hypothetical protein PPTG_05390 [Phytophthora parasitica INRA-310] >ETO62943.1 hypothetical protein F444_19242 [Phytophthora parasitica P1976] >ETP32162.1 hypothetical protein F442_19069 [Phytophthora parasitica P10297] >KUG01498.1 hypothetical protein AM587_10008099 [Phytophthora nicotianae])

HSP 1 Score: 87.8 bits (216), Expect = 9.700e-14
Identity = 76/275 (27.64%), Postives = 123/275 (44.73%), Query Frame = 0

Query:  110 LALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGL-LRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------GSSWDP-----------PAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLL 364
            L LL+ EW +    ILP           +F++Y H I HN  YY+Q      +     L DLG  L+     E   W    +  L+   +F+  + L LT+            +   GR     P  + + ++R    +S+ +  R I+FLVT +P PA++C           +  DP           P  +GE+F+R+     CGDLMFS HT + +  +L V K+ PN     ++ +  +T +A  ++A + HY+ DV  A+Y+  + W  L
Sbjct:   21 LQLLAKEWKI----ILPC----------VFMQYAHAIFHNLAYYIQAHYLSTE-QRFTLHDLGYELMG----ELTGWASDLSDILVFATIFAPAIALVLTIPL---------FRQEPGR-----PRYLVITLKRCLLQLSICLVFRCISFLVTALPGPADHCELKFNDTCLAANPDDPVPCVVPNPEFNPPSIGELFTRLDSLNGCGDLMFSSHTIYTVSFILTVWKYWPNKYGISIMVLVQIT-IAFLIVASRKHYTLDVFSALYIVPLFWLAL 261

[Close]

BLAST of NO01G01990 vs. NCBI_GenBank
Match: ETL27922.1 (hypothetical protein L916_18620 [Phytophthora parasitica] >ETP04017.1 hypothetical protein F441_19113 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 87.8 bits (216), Expect = 9.700e-14
Identity = 76/275 (27.64%), Postives = 123/275 (44.73%), Query Frame = 0

Query:  110 LALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGL-LRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------GSSWDP-----------PAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLL 364
            L LL+ EW +    ILP           +F++Y H I HN  YY+Q      +     L DLG  L+     E   W    +  L+   +F+  + L LT+            +   GR     P  + + ++R    +S+ +  R I+FLVT +P PA++C           +  DP           P  +GE+F+R+     CGDLMFS HT + +  +L V K+ PN     ++ +  +T +A  ++A + HY+ DV  A+Y+  + W  L
Sbjct:   21 LQLLAKEWKI----ILPC----------VFMQYAHAIFHNLAYYIQAHYLSTE-QRFTLHDLGYELMG----ELTGWASDLSDILVFATIFAPAIALVLTIPL---------FRQEPGR-----PRYLVITLKRCLLQLSICLVFRCISFLVTALPGPADHCELKFNDTCLAANPDDPVPCVVPNLEFNPPSIGELFTRLDSLNGCGDLMFSSHTIYTVSFILTVWKYWPNKYGISIMVLVQIT-IAFLIVASRKHYTLDVFSALYIVPLFWLAL 261

[Close]

BLAST of NO01G01990 vs. NCBI_GenBank
Match: XP_002907552.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY64116.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 87.4 bits (215), Expect = 1.300e-13
Identity = 76/275 (27.64%), Postives = 123/275 (44.73%), Query Frame = 0

Query:  110 LALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGL-LRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------GSSWDP-----------PAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIWWLL 364
            L LL+ EW +    ILP           +F++Y H I HN  YY+Q      +     L DLG  L+     E   W    +  L+   +F+  + L LT+            +   GR     P  + + ++R    +S+ +  R I+FLVT +P PA++C           +  DP           P  +GE+F+R+     CGDLMFS HT + +  +L V K+ PN     ++ +  +T +A  ++A + HY+ DV  A+Y+  + W  L
Sbjct:   21 LQLLAREWKI----ILPC----------VFMQYAHAIFHNLAYYIQAHYLSTE-QRFTLHDLGYELMG----ELTGWASDLSDILVFATIFAPAIALVLTIPL---------FRQEPGR-----PRYLVITLKRCLLQLSICLVFRCISFLVTALPGPADHCELKFNDTCLAANPDDPVPCVVPNPEFTPPTIGELFTRLDSLNGCGDLMFSSHTIYTVSFILTVWKYWPNKYGISIMVLVQIT-IAFLIVASRKHYTLDVFSALYIVPLFWLAL 261

[Close]

BLAST of NO01G01990 vs. NCBI_GenBank
Match: POM58476.1 (Transmembrane protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 87.0 bits (214), Expect = 1.700e-13
Identity = 82/272 (30.15%), Postives = 125/272 (45.96%), Query Frame = 0

Query:  110 LALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNYVYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMFSLGLLRLTLTNVNWGGPTIDVKTSD-GRVKTTLPMPVCLVMRRACQAMSVGMTLRIITFLVTLIPNPAEYCH---------GSSWDP-----------PAHVGEIFSRVRFTGSCGDLMFSGHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVLVAIYVNIMIW 361
            L LL+ EW +    ILP           +F++Y H I HN  YY+QG     +     L DLG  L    +PE    I GFA+ L   L+F+            +G   I V T    R +   P  + +V++R    +S+ +  R I+FLVT +P+PA++C           +  DP           P  V E F+R+     CGDLMFS HT + + L+L + K+ PN     ++ V     +A  ++A + HY+ DV  A+Y+  + W
Sbjct:   21 LQLLAQEWKI----ILPC----------VFMQYAHAIFHNLAYYIQGHYLSTE-QRFTLYDLGYEL----MPE----IHGFASHLSDILVFA----------AIFGPAIILVLTIPLFRQEPGRPRYLVIVLKRCLLQLSICLIFRCISFLVTALPSPADHCELKFDDACLAANPNDPVPCVIPNPEFNPPTVSEWFTRLDSLNGCGDLMFSSHTIYTVSLILTMWKYWPNKYGITIM-VSMQIAIAFLIVASRKHYTLDVFSALYIVPLFW 258

The following BLAST results are available for this feature:

BLAST of NO01G01990 vs. NCBI_GenBank

BLAST of NO01G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM29203.1	7.000e-129	65.45	heat shock protein [Nannochloropsis gaditana]	[more]
EWM22532.1	3.900e-55	37.06	hypothetical protein Naga_100290g2 [Nannochloropsi...	[more]
XP_005855301.1	8.100e-53	47.00	heat shock protein [Nannochloropsis gaditana CCMP5...	[more]
XP_024575218.1	2.700e-16	29.78	Uncharacterized conserved protein [Plasmopara hals...	[more]
CCA24055.1	3.600e-16	28.69	conserved hypothetical protein [Albugo laibachii N...	[more]
XP_009517302.1	1.500e-14	27.90	hypothetical protein PHYSODRAFT_469105 [Phytophtho...	[more]
XP_008897180.1	9.700e-14	27.64	hypothetical protein PPTG_05390 [Phytophthora para...	[more]
ETL27922.1	9.700e-14	27.64	hypothetical protein L916_18620 [Phytophthora para...	[more]
XP_002907552.1	1.300e-13	27.64	conserved hypothetical protein [Phytophthora infes...	[more]
POM58476.1	1.700e-13	30.15	Transmembrane protein [Phytophthora palmivora var....	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL006	nonsL006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR047	ncniR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008145	NSK008145	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G01990.1	NO01G01990.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|576465	gene_180	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100007g23	gene1492	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G01990.1	NO01G01990.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO01G01990 ID=NO01G01990|Name=NO01G01990|organism=Nannochloropsis oceanica|type=gene|length=2593bp
TTTTTTTGCCTCTCATTTTGCGTGTGTCCGAAAGGGGCTTGGACACTGAC
GAACCGACACATCTTGTGTTTTTCCTGGAGACGTACGTGCAGTGATGCTT
TCTACCCTGCTTGGCAATTTGATGACACCAGCAAAGCATCGTGCCCGCGA
CAACCATGCTATCCAGCTTTCCAGACTACTTGGGCGGTGAGTGTCATAAA
GCCAAGTGAGGCTGCCGTGGTCTAAGCCCCTTTGTCGGCATCCGGACCTA
CGGGTTCAACATTGCCAGCAGGCAGCCTTCTCCTTTTCATCAACACTTCC
CCGTGAGGCTTGGCATGGCTGCGTCCTGATACGTTTATATCTCGTCACCA
GCATTGATCATCCTTGCCACCCACCACACAGGTCAGTCCTTCGCCCGACC
ATAAAAGGCGGGACGGGGGGGACCCGGCAACCACGCATTCTTGGCAGCAT
CAACAGCTTGTTTAGTTGGTGGTGCCATAGTGAGAGGGACGCGGCAAGAT
AAAAATTTGCAGCGGGACACCGCTGTCGCGGTGGAAAGAGGAGGATTAGC
AGCACCGATAGCAGTGGCCTCAATTTTGACTACCATCTTCTCATGGAAGA
GGACGAGGACGGGACCAGCACTCCGGCAACCTCCACTGAAGAAACACGCC
GAAGCAAGCGCGACCTATCACCATTTCCCCCATCCAACTACCATGACGCC
GATGCCTCGCCCGCGCGCCGCCTCCCACCAGCCAGCACCGCCGCAGACAG
TCAAGAGAGCGAGCTGGAAGCAGGCTTGGGCGCAAAGCAAGATGTGCGAC
AACGCGGCGTGCCCAATGGCGGTGTGGAGAGAAGCAATTCCGGCGGCCAC
GCCCAGTATCATCCCACCTCCCACCACTCCCCCCCCGGGCGCGTCGCCGT
CAAATCCGAACGTGAAATGCTCGCCTTGCTCTCCTTTGAGTGGGCACTGA
TGAAACGTGGCATTCTTCCGTCGAAATCCCCGCTCTTCTTCCTCATCCTC
TGGATTTTTGTCGAGTACGTCCATCTAATTGCCCACAACTACGTCTATTA
CCTTCAAGGTAAACTCTGGGGTGCTGATGGCCCCCCTCCCCCGTTGCAAG
ATTTGGGTTTGATGCTCCTTGCTGACCGGTTGCCGGAGAGCTTTGAATGG
ATCATTGGCTTTGCGACTGCGTTGTTGTGTGGGCTGATGTTCTCCCTGGG
CCTTCTCCGGCTTACACTCACTAACGTCAACTGGGGGGGGCCTACGATCG
ATGTCAAAACGAGCGATGGCCGGGTCAAGACAACACTACCTATGCCTGTC
TGCTTAGTAATGCGGCGTGCGTGTCAAGCAATGAGCGTGGGAATGACTTT
AAGAATAATTACCTTTCTGGTTACACTAATTCCTAACCCTGCGGAGTACT
GTCATGGGAGCAGCTGGGACCCTCCTGCACATGTTGGGGAGATATTTTCG
CGAGTTAGGTTTACGGGAAGCTGTGGGGATTTGATGTTTTCGGGGCACAC
CTCTCATGGGATGGTGTTGATGCTTGTTGTTTGTAAGTTTGCCCCCAATC
TGAGGGCCGCGAAGGTCTTGGCGGTTGGATCGATGACGTTGCTAGCGGCG
TCGTTGCTTGCATTCAAGGCGCATTATTCCTCCGACGTTCTCGTAGCAAT
CTATGTTAACATCATGATTTGGTGGCTGTTGCCACGGGATGCGGCGAGTA
TCAAACTCGCCGATTTGCAGTTAGATGACCATTTGCCCTTGCCCCCGACG
CCCACGTTTTTGTCGGTGCCGCCGCTGTCAGCTGCAGCTTCGCTTTCGGG
TGTGGGGGAATTGAATACTCCGAATTCTTCGACGTTGTCCTTGTGTAGGG
ATAGGGAAGCAGGGGGTGCAGGAGGAGGACAAGAAGCGGGAAAGGGTGAA
GGGACTTCAAGAAGAGGCAGGAGAAGGGAGGGGGAGGGACAGCCACCAGC
AGCAATTGTGCAACAGGAGGAAGAAGCGGTGCGGAGGCTGGAGGGGGGAT
GCGTGTGAATGAAGTAAGGGATGAAGGCAGAGACGGACTGTTGATGTATG
TAAGAGGGAATTTGAAAATTAGGATATGAAAATGAGAGAATTTATGTATA
CAGAGGGGAAAATCATTTTGGACGGGCACAAATTAAAAAAAATTTAAGAG
ATAGAGAAAGCGAGAGAGATAAAATGAGGGCACCGATGCCGACAGTTTCT
TTGGATGACAGAAGTAGAGATGTGTGTGCGTGTGTGCGTGTGTGCGAGTG
TGTCGGTTGGGTCTGTCAGTCTGTTTCTTTGGATACCCCTTTGCCCCGCA
TTGTTTTTGGTGCTCCTAAGATTGAGATTTCCACAATATCGAGCTTCTAC
ACAATGTCAACGACATTGACGACCACAACAATGACGACGACACACATATA
CACGCGTACACTGACACACATACATTCACACACGACACAAGAAAAGGGGG
AACGATAAGTAGACGTGGGTGCACGTACAATGATTGATTCGGATGGATAT
AATTCGCATGTGTGGCATTCCCTTTTCCTTCGTCTTTCTCTTTCCCCTCG
GCAGACTTCTGAAGAAGTATACCTAAACGAATTCTGTTTTTCA

protein sequence of NO01G01990.1

>NO01G01990.1-protein ID=NO01G01990.1-protein|Name=NO01G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bp
MEEDEDGTSTPATSTEETRRSKRDLSPFPPSNYHDADASPARRLPPASTA
ADSQESELEAGLGAKQDVRQRGVPNGGVERSNSGGHAQYHPTSHHSPPGR
VAVKSEREMLALLSFEWALMKRGILPSKSPLFFLILWIFVEYVHLIAHNY
VYYLQGKLWGADGPPPPLQDLGLMLLADRLPESFEWIIGFATALLCGLMF
SLGLLRLTLTNVNWGGPTIDVKTSDGRVKTTLPMPVCLVMRRACQAMSVG
MTLRIITFLVTLIPNPAEYCHGSSWDPPAHVGEIFSRVRFTGSCGDLMFS
GHTSHGMVLMLVVCKFAPNLRAAKVLAVGSMTLLAASLLAFKAHYSSDVL
VAIYVNIMIWWLLPRDAASIKLADLQLDDHLPLPPTPTFLSVPPLSAAAS
LSGVGELNTPNSSTLSLCRDREAGGAGGGQEAGKGEGTSRRGRRREGEGQ
PPAAIVQQEEEAVRRLEGGCV*

Synonyms

Publications