NO01G01880, NO01G01880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01880 vs. NCBI_GenBank
Match: EWM29198.1 (ribosome biogenesis gtpase [Nannochloropsis gaditana]) HSP 1 Score: 852.8 bits (2202), Expect = 1.000e-243 Identity = 607/1003 (60.52%), Postives = 693/1003 (69.09%), Query Frame = 0 Query: 1 MASRARGPTYPGTLNSVTLFVLVLTMVLMRLPQTMAFQGFVRARTSAAAASSRASLPSFATLATRPSTRQPLQQSRLVRHVRVPTVTAARK-KNXXXXXXXXXXXTSAVSPRGSKPAADDKKLGRGPRNRRHITVSAEEEEFAALSDSRAPVLGEDGLPRGRPRIASRSMGPPKKRPAMTFDPTWTAKASGGNS----GNSSSGNKALSGSITKKKAEETNRVRPPVAAVPTAIIEDRGENDGGDEEEDEMDGEISDLPKGLILRALDGESYEEARRLANLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKVLSMEDRLRMAETGNIFNPYVARMHTKSGPSRSQIGKGED-------DLLFDELDEKEGEMEDDMSQGDAFAFDRRPMRPVKYHYKIVMDAGTCPGCGNSFQTKNDSSPGFLPSDVFQRMQSKMMALRKTQPVKQQPGAAPLSKSXXXXXXXXXXXXXXXXXXXADLKEGERDDGGDLYQGMTAEEEVEMLLSGKDRDEFEKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVICQRCHKLKHYGEVEDSLRPGWTDNEALTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGENPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNTRHIHLVSCKTGANVKPLLRAMKLLARQRKRDLYVIGAANVGKSTFINRLIELGRSGGDQGRNAKKSKKKKQDPSKTVGASLVTTSPLPGTTLNFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMVEGRPFLFTFYVSNDVKLHQTGTDRADEFLEKHIGDLVFPPFTHERREEMGPWVARDFDIEGTGWKTSAIDIVISGLGWISITGALNCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAIKGDRQKGGSR 992 MA G + + + L+ ++ +M+LP AFQG VR +SA A S A L SF + R P+ S L R T+ A+RK XXXXXXXXXXX F+ALSDSR V E R RPR+ SR P KR MT +P W A NS ++S + +GS + + R P+ A +E DE+ED + PK +++R LD +SYEEARR A LS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P + +SME+RLR+AE+GNIFNPYVARMHT++G G+ ED L F E D GE ++ + A P PVK+ YK+V+ AGTCPGCGN+FQTKN+SSPGFLP DV++R+Q++M ALR P K +P A PLSKS K R + GDL+QG++AEEEVEMLLSGK R+EFE + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VICQRCHKLKHYG+VED+LRPGW+ NE LTPERFRELVSVVR+KRCAVVCLVDIFDFHGSLLYNLPRIVG NPVL+ VNKADLLP DFS++R+RIWVKQELEKVGM +V+TR IHL+SCKTG NV+PLLR+MK +ARQR+RDLYVIGAANVGKSTFINRLIELGRSGGD TS LPGTTL+FIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDM+EGRPFLFTFYVSN+VKLHQT TDRA EFL+ H+G+L+ PPFT ERR MGPWV RDF+IEGTGWKTSA+DIVISGLGWIS+TGAL+CKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRA+K D+QKG SR Sbjct: 1 MAPHLSGLNFHSLVKRSSAAALLFSLFIMKLPCVGAFQGVVRVWSSAVAPSRAAVLTSFMSPKRHVLKRMPI--SALCRR---STIMASRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSALSDSRTSVSEEKDSIR-RPRVISRPPSRPVKR-TMTINPNWRAHGGPENSIKGPEEAASSSSGTAGSGKARVGKNGPRGASPLGAEVPRYVE--------DEDEDGI-----TFPKDMVIRGLDSQSYEEARRQAVLS-----DDEGEEEEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAHLPPVRPVSMEERLRLAESGNIFNPYVARMHTRAGTGEGPSGEAEDPGPMDGGGLRFLEEDVSPGEKREEARRAQA------PSLPVKFQYKVVVGAGTCPGCGNAFQTKNESSPGFLPPDVYERLQAQMTALRPGAPRKPRPDAPPLSKSAAGALRK---------------KTETRGEEGDLFQGLSAEEEVEMLLSGKSREEFEIE---RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGD-----AXXXXXXXXXXXXXXXXXXXTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFTQERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGSSR 949
BLAST of NO01G01880 vs. NCBI_GenBank
Match: CBN74939.1 (Lrc5, mitochondrial YqeH-related GTPase [Ectocarpus siliculosus]) HSP 1 Score: 405.2 bits (1040), Expect = 5.800e-109 Identity = 196/405 (48.40%), Postives = 267/405 (65.93%), Query Frame = 0 Query: 589 VICQRCHKLKHYGEVEDSLRPGWTDNEALTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGENPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNTRHIHLVSCKTGANVKPLLRAMKLLARQRKRDLYVIGAANVGKSTFINRLIELGRSGGDQGRNAKKSKKKKQDPSKTVGASLVTTSPLPGTTLNFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMVEGRPFLFTFYVSNDVKLHQTGTDRADEFLEKHI--GDLVFPPFTHERREEMGPWVARDFDIEGTGWKTSAIDIVISGLGWISITGALNCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAIKGDRQKGGSR 992 ++CQRC++L++YG VED+LRPG++D++ LTP+RF EL+ +RK+RC ++ LVD+FDFHG+ LYNLP+I G NPVL+ NK DLLP D +R+ WV+ + + G+ ++ R +HLVSCK G + PL+R G GG +G A V VT S +PGTTL+F++VDLGDK +LYDTPGL+LPH +T+ LN EEL+A IP+K+++HVT R+ EGK VL+GGL R+++V GRPFL TF+VSNDV+LH T R D+ L +H+ G ++FPPF ER +E+GP V DFDI G GW+ SA D+VI+GLGW+S+TGA +RV AP V V R PL+PYE+W TTAK+TG +K R+K G R Sbjct: 376 LVCQRCYRLRNYGSVEDTLRPGFSDSDLLTPQRFLELLGSIRKQRCLIIYLVDLFDFHGTFLYNLPKITGNNPVLVAGNKVDLLPKDLKRQRVTKWVRDKCRESGLPDMEMRDVHLVSCKHGVGIPPLMRK--------------------------------GGKGGGRGGKA-----------PAVAGRGVTVSSVPGTTLDFLKVDLGDKRALYDTPGLLLPHTLTSRLNAEELRAAIPKKKVDHVTFRVGEGKVVLVGGLARVEVVTGRPFLLTFFVSNDVRLHPTDARRVDDMLSEHVGKGQMIFPPFDPERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTLRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRKKQGRR 737
BLAST of NO01G01880 vs. NCBI_GenBank
Match: GAX26013.1 (hypothetical protein FisN_4Hh492 [Fistulifera solaris]) HSP 1 Score: 386.3 bits (991), Expect = 2.800e-103 Identity = 216/586 (36.86%), Postives = 329/586 (56.14%), Query Frame = 0 Query: 420 KIVMDAGTCPGCGNSFQTKNDSSPGFLPSDVFQRMQSKMMALRKTQPVKQQPGAAPLSKSXXXXXXXXXXXXXXXXXXXADLKEGERDDGGDLYQGMTAEEEVEMLL--SGKDRDEFEKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVICQRCHKLKHYGEVEDSLRPGWTDNEALTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGENPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNT--RHIHLVSCKTGANVKPLLRAMKLLARQRKRDLYVIGAANVGKSTFINRLIELGRSGGDQGRNAKKSKKKKQDPSKTVGASLVTTSPLPGTTLNFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMVEG-RPFLFTFYVSNDVKLHQTGTDRADEFLEKHIGDLVFPPFTH--ERREEMGPWVARDFDIEGTGWKTSAIDIVISGLGWISITGALNCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAIK-------GDRQKGGSR 992 K+V +A TC CG FQ+ +++ PG+LP + F ++ K+ L + Q ++++ + T E+E+E L+ SGK+ + VIC+RCH L+++G+V+++LRPGWT ++ E+F EL+ +R+K +V LVD+FDF GS+L L I G+NPV++ NKADLLP+ R WV++ELE +G+K + + LVSCKTG + +L + LA +R D+YVIG+AN GKST IN ++ GG + + + K++ + + G VTTSPLPGTTL FI+VDLGD LYDTPGL++P T LL +ELK V+P KR+ +T R++ GK VL+GGL R+++++ +PFLFTF+VSND+KLH T D+A +F++KH G ++ PP T ER E++G + +IEG+GWK +A DI I+GLGW+++TGA KV++ P+++G+ +R PLMP++ W +TAK+TG +A++ G R+KG R Sbjct: 234 KLVTNAMTCSACGVDFQSTSENRPGYLPPEKFD-LRVKLSKLEEMQRLQEKADS----------------------------------------DSWTPEDEIEWLIQTSGKENSPNSDN-----------------------------YIDINTMAEEMELDLSKLSEKKVICKRCHGLQNFGKVDETLRPGWTKEPMISQEKFLELLRPLREKTAVIVALVDLFDFSGSVLPELDMIAGDNPVILAANKADLLPSKMGTLRAENWVRRELEYLGVKSLANIGGSVRLVSCKTGVGIDKMLDKARQLAEERDCDIYVIGSANAGKSTLINHIL-----GGYRSHDGEPRKRRAGNANARRGQ--VTTSPLPGTTLRFIKVDLGDGRFLYDTPGLLVPGTFTQLLTADELKMVVPSKRVEPITFRIEPGKCVLIGGLARIELMDDCKPFLFTFFVSNDIKLHPTSVDKASDFVKKHAGGILTPPLTPGVERMEQIGDFEEHVVEIEGSGWKEAAADITITGLGWVAVTGAGPAKVKICVPKSIGISVRPPLMPFDMWESTAKYTGNKAVRKTSKSSSGKRRKGVGR 742
BLAST of NO01G01880 vs. NCBI_GenBank
Match: GAX24367.1 (hypothetical protein FisN_4Lh492 [Fistulifera solaris]) HSP 1 Score: 384.0 bits (985), Expect = 1.400e-102 Identity = 220/617 (35.66%), Postives = 337/617 (54.62%), Query Frame = 0 Query: 387 ELDEKEGEMEDDMSQGDAFAFDRRPMRPVKYHYKIVMDAGTCPGCGNSFQTKNDSSPGFLPSDVFQRMQSKMMALRKTQPVKQQPGAAPLSKSXXXXXXXXXXXXXXXXXXXADLKEGERDDGGDLYQGMTAEEEVEMLLSGKDRDEFEKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVICQRCHKLKHYGEVEDSLRPGWTDNEALTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGENPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNT--RHIHLVSCKTGANVKPLLRAMKLLARQRKRDLYVIGAANVGKSTFINRLIELGRSGGDQGRNAKKSKKKKQDPSKTVGASLVTTSPLPGTTLNFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMVEG-RPFLFTFYVSNDVKLHQTGTDRADEFLEKHIGDLVFPPFTH--ERREEMGPWVARDFDIEGTGWKTSAIDIVISGLGWISITGALNCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAIK-------GDRQKGGSR 992 +LD+ ++ D ++ D + + + K+V +A TC CG FQ+ ++S PG+LP + F +Q K+ L + Q ++++ + T E+E+E L+ ++ VIC+RCH L+++G+VE++LRPGWT ++ E+F EL+ +R+K +V LVD+FDF GS+L L I G+NPV++ NKADLLP R WV++ELE +G+K + + LVSCKTG V +L + LA + D+YVIG+AN GKST INR++ GG + + + K++ + + G VTTSPLPGTTL FI+VDLGD LYDTPGL++P T LL +ELK V+P KR+ +T R++ GK VL+GGL R+++++ +PFLFTF+VSND+KLH T D+A +F++KH G ++ PP ER E++G + +IEG+GWK +A DI I+GLGW+++TGA KV++ P+++G+ +R PLMP++ W +TAK+TG +A++ G R+KG R Sbjct: 201 QLDDYAKQLSADDVGALRYSTDGQIAKQKENLSKLVTNAMTCSACGVDFQSTSESRPGYLPPEKFD-LQVKLGKLEEMQRLQEKADS----------------------------------------DSWTPEDEIEWLIQTSGKENLPHS---------------------------DNYIDINTMAEEMDLDFSKVSEKKVICKRCHGLQNFGKVEETLRPGWTKEPMISQEKFLELLRPLREKTAVIVALVDLFDFSGSVLPELDMIAGDNPVILAANKADLLPLKMGTLRAENWVRRELEYLGVKSLANIGGSVRLVSCKTGVGVDKMLDKARQLAEELGCDIYVIGSANAGKSTLINRIL-----GGYRSHDEEPRKRRAGNANARRGQ--VTTSPLPGTTLRFIKVDLGDGRFLYDTPGLLVPGTFTQLLTADELKMVVPSKRVEPITFRIEPGKCVLIGGLARIELMDDCKPFLFTFFVSNDIKLHPTSVDKASDFVKKHAGGILTPPLAPGIERMEQIGDFEEHVVEIEGSGWKEAAADITITGLGWVAVTGAGPAKVKICVPKSIGISVRPPLMPFDMWESTAKYTGNKAVRKISKSSSGKRRKGVGR 742
BLAST of NO01G01880 vs. NCBI_GenBank
Match: XP_002184124.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44302.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 382.5 bits (981), Expect = 4.000e-102 Identity = 214/573 (37.35%), Postives = 318/573 (55.50%), Query Frame = 0 Query: 414 PVKYHYKIVMDAGTCPGCGNSFQTKNDSSPGFLPSDVFQRMQSKMMALRKTQPVKQQPGAAPLSKSXXXXXXXXXXXXXXXXXXXADLKEGERDDGGDLYQGMTAEEEVEMLLSGKDRDEFEKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVICQRCHKLKHYGEVEDSLRPGWTDNEALTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGENPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNTRH--IHLVSCKTGANVKPLLRAMKLLARQRKRDLYVIGAANVGKSTFINRLIELGRSGGDQGRNAKKSKKKKQDPSKTVGASLVTTSPLPGTTLNFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMV-EGRPFLFTFYVSNDVKLHQTGTDRADEFLEKHIGDLVFPPFT--HERREEMGPWVARDFDIEGTGWKTSAIDIVISGLGWISITGALNCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAI 982 P K +++V ++ +C CG+ FQ N+ PG+LP + F + AL K + +++ A ++ T E+E+E L+ + + + K+ VIC+RCH L+++G+V+DSLRPGWT L+ E+FREL+ +++K +V LVD+FDF GS+L L I GENPV++ NKADLLP++ R WV++ELE +G+K + + LVSCKTGA + LL + LA + D+YV+GAAN GKST +N ++ G D+ +S K + ++ VTTSPLPGTTL FI+VDLG SLYDTPGL++ +T LL EELK V+P+K I VTLRL GK VL+GGL R++++ + RPF+FTF+V+N++KLH T +RADEF+ KH G ++ PP +R EE+G + DI+G GWK +A DI ++GLGW+++TGA +V++ P+ +GV +R PLMP++ W +K+TG RA+ Sbjct: 201 PRKERFQLVTNSMSCSACGSDFQCHNEDRPGYLPPEKF----ATQTALGKIEQMQKLQDKAEKAE-------------------------------------WTPEDEIEWLIQTQGKKDPNKE------------------------MQEVPQIDVDSLAGEMGLDLVELSKKMVICKRCHGLQNFGKVQDSLRPGWTKEPLLSQEKFRELLRPIKEKPAVIVALVDLFDFSGSVLPELDEIAGENPVILAANKADLLPSEMGRVRAESWVRRELEYLGVKSLAGMRGAVRLVSCKTGAGINDLLEKARGLAEEIDGDIYVVGAANAGKSTLLNFVL-----GQDK---VNRSPGKARAGNRNAFKGAVTTSPLPGTTLKFIKVDLGGGRSLYDTPGLLVLGTVTQLLTPEELKIVVPKKPIEPVTLRLSTGKCVLVGGLARIELIGDSRPFMFTFFVANEIKLHPTDIERADEFVLKHAGGMLTPPLAPGPKRMEEIGEFEDHIVDIQGAGWKEAAADISLTGLGWVAVTGAGTAQVKISVPKGIGVSVRPPLMPFDIWKVASKYTGSRAV 700
BLAST of NO01G01880 vs. NCBI_GenBank
Match: EJK65712.1 (hypothetical protein THAOC_13399 [Thalassiosira oceanica]) HSP 1 Score: 364.4 bits (934), Expect = 1.100e-96 Identity = 183/415 (44.10%), Postives = 270/415 (65.06%), Query Frame = 0 Query: 589 VICQRCHKLKHYGEVEDSLRPGWTDNEALTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGENPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNT--RHIHLVSCKTGANVKPLLRAMKLLARQRKRDLYVIGAANVGKSTFINRLIELGRSGGDQGRNAKKSKKKKQDPSKTVGASLVTTSPLPGTTLNFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMV-EGRPFLFTFYVSNDVKLHQTGTDRADEFLEKHIGDLVFPPFT--HERREEMGPWVARDFDIEGTGWKTSAIDIVISGLGWISITGALNCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAIK-------GDRQKGGSR 992 VIC+RCH L+++G VE +LRPGWTD L+ E+FR+L+ ++ K ++ LVD+FDF GS+L L +I G+NPV++ NKADLLP++ R WV++ELE + + + + LVSCKTG + L+ + LA +++ D+YV+GAAN GKS G + K K + + +K G+ VTTSPLPGTTL FI+VDL LYDTPGL++P +T L EELK V+P+KR+ VT R++ GK L+GGL R++++ + +PFLFTF+V+N++KLH T + +AD+F+ H+G L+ PP R EE+G + + +++G GWK +A DI + GLGW+++TGA KVR+ P+ +GV LR PLMP++ W TTAK+TG R+++ G R+KG R Sbjct: 214 VICKRCHGLQNFGTVEKNLRPGWTDEPTLSQEQFRKLLMPLQNKVAVIIALVDLFDFSGSVLPELDKIAGDNPVILAANKADLLPSEMGHVRAENWVRRELEYLDVNSIANIGGAVRLVSCKTGYGISALMEKAQSLAEEKECDIYVVGAANAGKSY--------------DGASKKNGKMRAGNANKWKGS--VTTSPLPGTTLQFIKVDLSGGKVLYDTPGLLVPGCLTERLTPEELKIVVPKKRVEPVTFRIQAGKCALVGGLARVELIGDCKPFLFTFFVANEIKLHLTSSLKADDFISSHVGKLLTPPLEPGQARLEEIGEFEYHEIEVQGEGWKQAAADITLRGLGWVAVTGAGRAKVRIGVPKGIGVSLRPPLMPFDVWETTAKYTGGRSVRKSGKSRTGKRRKGVGR 612
BLAST of NO01G01880 vs. NCBI_GenBank
Match: XP_005713542.1 (unnamed protein product [Chondrus crispus] >CDF33723.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 352.8 bits (904), Expect = 3.400e-93 Identity = 179/427 (41.92%), Postives = 263/427 (61.59%), Query Frame = 0 Query: 590 ICQRCHKLKHYGEVEDSLR---------------PGWTDNE---------ALTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGE-NPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNTRHIHLVSCKTGANVKPLLRAMKLLARQRKRDLYVIGAANVGKSTFINRLIELGRSGGDQGRNAKKSKKKKQDPSKTVGASLVTTSPLPGTTLNFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMVEGRPFLFTFYVSNDVKLHQTGTDRADEFLEKHIGDLVFPPFTHERREEMGPWVARDFDIEGTGWKTSAIDIVISGLGWISITGALNCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAIKGDRQKGGSR 992 +CQRC++L HYG++E LR TD E L+P +FR + +R ++ LVDIFDFHG+ + ++ I+G+ NP+++ VNK DLLP ++ R+ W+K E +G+ +V IHLVS G V L+ +A+QR+ D+YVIGAANVGKS+FINRL+ + R G G +K + ++D + +TTS +PGTTL+ I + LG KV+LYDTPGL++ HQ+T L+ +EL+AV+P K + +VT RL EGK++ +GGL RL++V G+PF FT + + VK+H D A EFL +H+GD + PPF+ E E++G W ++ F EG WK S +DIV+SGLGWIS+TG ++R+ P VGV R PLMP+ET +K+TG A+ + + S+ Sbjct: 90 VCQRCYRLTHYGKIESHLRVKPKRTFPLPRTSSLSDKTDIEKESSGDGLSELSPRKFRRTLERLRNVNAVIIFLVDIFDFHGTFIPSVEDIIGQKNPIILAVNKVDLLPKNYKASRVEGWIKHECSVMGLHDV--AGIHLVSSTKGTGVGELVADALRIAKQRRSDVYVIGAANVGKSSFINRLMRI-RKGKGNGSRSKDDGRPRRDKT---SLGTITTSVVPGTTLDVIRIPLGGKVNLYDTPGLMISHQLTNFLDAKELRAVLPSKSVENVTFRLAEGKAIYIGGLARLEVVSGKPFFFTCFFAPTVKIHPGRADGAHEFLHRHVGDFLTPPFSEEGLEKLGEWTSKSFTAEGQSWKKSCVDIVLSGLGWISVTGPGKVRLRIWVPRGVGVFTREPLMPFETDVGVSKYTGSTAVNRKQMRKSSK 510
BLAST of NO01G01880 vs. NCBI_GenBank
Match: XP_005706222.1 (GTP-binding protein [Galdieria sulphuraria] >EME29702.1 GTP-binding protein [Galdieria sulphuraria]) HSP 1 Score: 338.6 bits (867), Expect = 6.600e-89 Identity = 177/417 (42.45%), Postives = 260/417 (62.35%), Query Frame = 0 Query: 590 ICQRCHKLKHYGEVEDSLRPGWTDNEA-----LTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGENPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNTRHIHLVSCKTGANVKPLLRAMKLLARQRKRDLYVIGAANVGKSTFINRLIE-----------LGRSGGDQGR----NAKKSKKKKQDPSKTVGASLVTTSPLPGTTLNFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMVEGRPFLFTFYVSNDVKLHQTGTDRADEFLEKHIGDLVFPPFTHERREEMGPWVARDFDIEGTGWKTSAIDIVISGLGWISITGALNCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAIKGDRQ 987 +CQRC+ + H VED L+ G T++ + + F + + + KRC +V +VDIFDF GS + LP I G NPV+++VNK DLLP D + R+ +W+K + E G+ +++ IH VSC + + L + D+YV+G NVGKSTFINRL+ L G QG+ K++ K K+DP +TTS PGTTLN I + G S+YDTPG+I PHQIT LL +EE+K V+P+KR+ V+ RL EGK + GGL RL+M++G+PF FT ++SN+VK+H + T +A+E LE H+G L+ PP + + +E+G + A++F+++G GW S+ DIVISGLGW+++TG KVRV+AP+ VGV LR P+ P+E +K+TG +A G+R+ Sbjct: 137 VCQRCYYMVHRTLVEDQLKIGATEDSTNKDILHSLKLFEQRLENICSKRCIIVYMVDIFDFDGSFVSRLPFITGNNPVILIVNKIDLLPKDINIGRLYVWLKNQCEARGLTKIH--RIHFVSCTKDYRMGETKADIIRLVQYLNADVYVVGCTNVGKSTFINRLLSNTVEKKTGQELLNYLGLKQGQFSLTELKRAFKDKKDPQ-------LTTSCFPGTTLNPIRIHFGRSHSMYDTPGIIQPHQITHLLTSEEIKMVLPKKRVRVVSFRLMEGKCIHFGGLARLEMLQGKPFFFTVFMSNEVKVHPSTTAKAEELLETHVGGLLQPPISWRKYKELGNFKAKEFEVDGVGWLQSSHDIVISGLGWVAVTGCGRLKVRVVAPKGVGVFLREPIAPFEVLKGVSKYTGYKAFAGNRE 544
BLAST of NO01G01880 vs. NCBI_GenBank
Match: XP_004354073.1 (ribosome biogenesis GTPase YqeH, putative [Acanthamoeba castellanii str. Neff] >ELR24376.1 ribosome biogenesis GTPase YqeH, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 282.0 bits (720), Expect = 7.400e-72 Identity = 165/394 (41.88%), Postives = 231/394 (58.63%), Query Frame = 0 Query: 590 ICQRCHKLKHYGEVEDSLRPGWTDNEALTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGENPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNTRHIHLVSCKTGANVKPLLRAMKLLARQRKRDLYVIGAANVGKSTFINRLIELGRSGGDQGRNAKKSKKKKQDPSKTVGASLVTTSPLPGTTLNFIEVDLGDKVS--------LYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMVEG-RPFLFTFYVSNDVKLHQTGTDRADEFLEKHIGDLVFPPFTHERREEMGPWVARDFDIEGT----GWKTSAIDIVISGLGWISI---TGALNCKVRVMAPEAVGVRLRSPLMPYE 968 +CQRCH L+H+G V P E +E + ++ + C VV +VDIFDF GS + + I G NPV++V NK DLLP ERI+IW+K+ ++G+K N R +HL+S K+G V L R ++ L +++RD+YV+G NVGKST INRLI + +G + Q P K +L+TTS +PGTTLN I LG K + LYDTPG+I HQ+ LLN EEL +P++RI VT RL GK++ GGL RLD V+G P T ++S ++K+H T +AD+ + KH G L+ PP ER +++ ++A+D IE G K S DIV SGLGW S+ T + +R ++PE VG+ LR PLMP+E Sbjct: 44 VCQRCHSLRHHGIVTPLKVP---------YEEVKEHLKLISDQSCLVVKIVDIFDFSGSFINDFRGITGNNPVVLVGNKLDLLPVGAKPERIQIWLKRLATEMGLK--NVRSVHLISAKSGEGVHSLSRKIEQL--RKERDVYVVGCTNVGKSTLINRLISI----NTKGTYNSLTVHIVQGPKK---RNLITTSIVPGTTLNLISFPLGGKKAFKMGKRAFLYDTPGVINKHQMANLLNMEELSITLPKRRIQPVTYRLVPGKALFFGGLGRLDYVDGPGPLYLTLFLSKELKVHPTSIAKADDVMSKHAGTLLVPPLGEERAKQLPEFIAKDIHIEADEERGGLKKSFADIVFSGLGWTSLVTPTFDRDIHLRSLSPEGVGIFLREPLMPFE 417
BLAST of NO01G01880 vs. NCBI_GenBank
Match: WP_078597253.1 (ribosome biogenesis GTPase YqeH [[Bacillus] clarkii]) HSP 1 Score: 261.5 bits (667), Expect = 1.000e-65 Identity = 151/376 (40.16%), Postives = 218/376 (57.98%), Query Frame = 0 Query: 589 VICQRCHKLKHYGEVEDSLRPGWTDNEALTPERFRELVSVVRKKRCAVVCLVDIFDFHGSLLYNLPRIVGENPVLIVVNKADLLPTDFSEERIRIWVKQELEKVGMKEVNTRHIHLVSCKTGANVKPLLRAMKLLARQRK-RDLYVIGAANVGKSTFINRLIELGRSGGDQGRNAKKSKKKKQDPSKTVGAS---LVTTSPLPGTTLNFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMVEGRPFLFTFYVSNDVKLHQTGTDRADEFLEKHIGDLVFPPFTHERREEMGPWVARDFDIEGTGWKTSAIDIVISGLGWISITGALNCKVRVMAPEAVGVRLR 961 VICQRC KLKHY EV+D +LT + F ++++ + + +V LVDIFDF GS L L R G+N VL+V NK DLLP ++ W+K+ ++ G+K +HL+S TG V + L+ RK RD+YV+G+ NVGKSTFINRL+ K GA ++TTS +PGTTL+ I+V L D SLYDTPG+I HQ+ LL+ +ELK + P+K I +L +G+++ LGGL R+D V+G F YVSND+ +H+T ++ADE EKH+G+L+ PPF + +++ + AR++ ++ DIVISGLGWI++ G V+ AP+ V V +R Sbjct: 39 VICQRCFKLKHYNEVQD---------VSLTDDDFLKILNEIGSRDALIVKLVDIFDFDGSWLPGLHRFAGKNKVLLVGNKVDLLPKSVKRNKLTNWMKERSKEYGLK---AEEVHLMSAATGEGV---IETANLIEEHRKGRDVYVVGSTNVGKSTFINRLL------------------------KEFGAEDEFMITTSNIPGTTLDMIDVPLDDGSSLYDTPGIINHHQMAHLLDKKELKVISPKKEIKPKVFQLGDGQTLFLGGLARVDFVQGSDMSFVCYVSNDLNIHRTKLEKADELYEKHLGELLTPPF-KKNKDDFPEFTAREWKLQ-----NEKQDIVISGLGWITVHGK-GAFVKTYAPKGVHVTIR 368 The following BLAST results are available for this feature:
BLAST of NO01G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01880 ID=NO01G01880|Name=NO01G01880|organism=Nannochloropsis oceanica|type=gene|length=3145bpback to top protein sequence of NO01G01880.1 >NO01G01880.1-protein ID=NO01G01880.1-protein|Name=NO01G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=992bpback to top Synonyms
Publications
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