Lrc5, gene1504 (gene) Nannochloropsis gaditana

Overview
NameLrc5
Unique Namegene1504
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:941600..946861 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g10
Gene biotypeprotein_coding
GeneLrc5
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:941600..946861 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01880NO01G01880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1563rna1563-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1563rna1563Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1563

>rna1563-protein ID=rna1563-protein|Name=rna1563|organism=Nannochloropsis gaditana|type=polypeptide|length=949bp
MAPHLSGLNFHSLVKRSSAAALLFSLFIMKLPCVGAFQGVVRVWSSAVAP
SRAAVLTSFMSPKRHVLKRMPISALCRRSTIMASRKAGAGQGEHEAEGEG
ISPESISSTGSNAGGKGIGRGPRNRRKIAVSAEEEEFSALSDSRTSVSEE
KDSIRRPRVISRPPSRPVKRTMTINPNWRAHGGPENSIKGPEEAASSSSG
TAGSGKARVGKNGPRGASPLGAEVPRYVEDEDEDGITFPKDMVIRGLDSQ
SYEEARRQAVLSDDEGEEEEWADEGVMVEEEEGEDFDEEEEEEDFDEEEE
EEDFDEGDEEEEDGAHLPPVRPVSMEERLRLAESGNIFNPYVARMHTRAG
TGEGPSGEAEDPGPMDGGGLRFLEEDVSPGEKREEARRAQAPSLPVKFQY
KVVVGAGTCPGCGNAFQTKNESSPGFLPPDVYERLQAQMTALRPGAPRKP
RPDAPPLSKSAAGALRKKTETRGEEGDLFQGLSAEEEVEMLLSGKSREEF
EIERAAGRGREAQGGEVDLDLDEEGKEEKEGEGREGEEGGEGEEEEEEFR
AVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVV
CLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQ
ELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAA
NVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLD
FIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLK
EGKSVLLGGLVRLDMLEGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLG
ELISPPFTQERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGA
LDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGSSR
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Synonyms
Publications