NO01G01580, NO01G01580 (gene) Nannochloropsis oceanica

Overview
NameNO01G01580
Unique NameNO01G01580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1239
Alignment locationchr1:398833..400071 +

Link to JBrowse

Properties
Property NameValue
DescriptionCysteine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:398833..400071 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR001926TrpB-like_PLP-dep
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO01G01580 vs. NCBI_GenBank
Match: ETI49393.1 (hypothetical protein F443_06719 [Phytophthora parasitica P1569])

HSP 1 Score: 418.3 bits (1074), Expect = 2.700e-113
Identity = 210/349 (60.17%), Postives = 265/349 (75.93%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW-TDLRFL 407
            L+GNTPL+EL +LSKATGC ILAKAE+LNPGG+SKDRVA  ++++AER GLLK GGT++EGTSGSTGI+L+ + RARGYRC+IVMPDDQA EK +LL+Q+GAEV +VKPA I N  HY N A+     L++  +   F DQFE  ANF +HY  TGPE+WRQ +     + DAFVM+AGTGGTIAG S   KE      V+V+L DPPGS+L+NKV+  VCYA +Q E  VRRHRYD++AEG+G+DR+T NF  A++DDAF+VTDQE V+M+ FLL+ EG+FVGSS+ +N V AVRAA +LG GHT+VTVLCDSGQRHLT+FW+ + +  +     W   P  T L FL
Sbjct:  825 LVGNTPLIELTNLSKATGCMILAKAEFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAK----RLARNTEGGYFTDQFENTANFDSHYTTTGPEIWRQTDG----TVDAFVMAAGTGGTIAGTSAYLKEKNPD--VQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKIDDAFKVTDQEIVEMSRFLLREEGIFVGSSSGLNCVAAVRAARKLGPGHTIVTVLCDSGQRHLTKFWNEQHIRED-----WQLEPTATHLEFL 1158          
BLAST of NO01G01580 vs. NCBI_GenBank
Match: ETO78126.1 (hypothetical protein F444_06786 [Phytophthora parasitica P1976])

HSP 1 Score: 418.3 bits (1074), Expect = 2.700e-113
Identity = 210/349 (60.17%), Postives = 265/349 (75.93%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW-TDLRFL 407
            L+GNTPL+EL +LSKATGC ILAKAE+LNPGG+SKDRVA  ++++AER GLLK GGT++EGTSGSTGI+L+ + RARGYRC+IVMPDDQA EK +LL+Q+GAEV +VKPA I N  HY N A+     L++  +   F DQFE  ANF +HY  TGPE+WRQ +     + DAFVM+AGTGGTIAG S   KE      V+V+L DPPGS+L+NKV+  VCYA +Q E  VRRHRYD++AEG+G+DR+T NF  A++DDAF+VTDQE V+M+ FLL+ EG+FVGSS+ +N V AVRAA +LG GHT+VTVLCDSGQRHLT+FW+ + +  +     W   P  T L FL
Sbjct:  826 LVGNTPLIELTNLSKATGCMILAKAEFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAK----RLARNTEGGYFTDQFENTANFDSHYTTTGPEIWRQTDG----TVDAFVMAAGTGGTIAGTSAYLKEKNPD--VQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKIDDAFKVTDQEIVEMSRFLLREEGIFVGSSSGLNCVAAVRAARKLGPGHTIVTVLCDSGQRHLTKFWNEQHIRED-----WQLEPTATHLEFL 1159          
BLAST of NO01G01580 vs. NCBI_GenBank
Match: OQS01168.1 (cysteine synthase [Achlya hypogyna])

HSP 1 Score: 416.8 bits (1070), Expect = 8.000e-113
Identity = 208/325 (64.00%), Postives = 253/325 (77.85%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSR 384
            LIGNTPLV+LQSLS ATGC ILAKAE+LNPGG+SKDRVA  ++++AE  GLL PGGT+VEGTSGSTGI+LA + RA+GY+C+IVMPDDQA EK  LL+Q+GA VE VKPA I N  HY N+AR RA E+        F DQFE +AN   HY  TG E+W Q         DAFVMSAGTGGTIAGVS   K+   K  ++V L DPPGS+L+NKV+  VCYA +Q ER V+RHRYD++AEGIG+DR+TANF +A++DDA+ V+DQEAVDM+ FLL  EG+FVGSS+AMN V AVR A +LG GHT+VT+LCDSGQRHLT+FW++
Sbjct:   49 LIGNTPLVKLQSLSAATGCTILAKAEFLNPGGSSKDRVAKGIVEDAEARGLLAPGGTIVEGTSGSTGISLALIARAKGYKCIIVMPDDQAKEKSDLLEQFGATVEFVKPASIVNAKHYVNQARRRANEI----PGGFFADQFENLANCDVHYRTTGREIWEQTNG----KVDAFVMSAGTGGTIAGVSLYLKQQ--KPDIQVVLADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTIAEGIGIDRLTANFTQAKIDDAYVVSDQEAVDMSRFLLHEEGIFVGSSSAMNCVAAVRVAKKLGPGHTIVTMLCDSGQRHLTKFWNK 363          
BLAST of NO01G01580 vs. NCBI_GenBank
Match: CBJ25649.1 (Cysteine synthase [Ectocarpus siliculosus])

HSP 1 Score: 414.1 bits (1063), Expect = 5.200e-112
Identity = 216/339 (63.72%), Postives = 253/339 (74.63%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKV-VKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWP 397
            LIGNTP+V+LQSLS ATGC +L K EYLNPGGTSKDR+A  MI+EAE  G LK GGTVVEGTSGSTGI LASLCRA+GYRC+IVMPDDQA EKV LL+ +GAEV  V+ A IANP+HY N A   A+E        +FMDQFET AN   H   TGPE+W Q         DAFVM AGTGG +AGVS     +RGK    KVYLVDPPGSALFN+V+ GVCY+ +  ER VR+HRYD++AEGIG D VT NF +A +DDAFRV+DQEAV MAH+LL+ EGLFVG S AMN VGAV AA   G G  +VTVLCDSG R ++RFW+RE++E   +G++WP
Sbjct:   79 LIGNTPMVQLQSLSAATGCEVLVKVEYLNPGGTSKDRIAASMIKEAEATGELKQGGTVVEGTSGSTGICLASLCRAKGYRCVIVMPDDQAGEKVELLRTFGAEVIQVRTASIANPDHYINVAARLARE----RPGYVFMDQFETEANLKAHLAHTGPEIWEQTNGRL----DAFVMGAGTGGCLAGVSLF---LRGKGCPAKVYLVDPPGSALFNRVRHGVCYSPQMSERDVRKHRYDTIAEGIGNDHVTGNFGKAILDDAFRVSDQEAVYMAHYLLKHEGLFVGCSAAMNCVGAVAAARRAGTGKRIVTVLCDSGSRGISRFWNREFIEA--RGLKWP 404          
BLAST of NO01G01580 vs. NCBI_GenBank
Match: XP_009826436.1 (hypothetical protein H257_03849 [Aphanomyces astaci] >ETV84744.1 hypothetical protein H257_03849 [Aphanomyces astaci])

HSP 1 Score: 412.5 bits (1059), Expect = 1.500e-111
Identity = 217/349 (62.18%), Postives = 260/349 (74.50%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWP-ERPWTDLRFL 407
            LIGNTPLV + SLSKATGCRILAKAE+LNPGG+SKDRVA  +I++AE  GLL PGGT+VEGTSGSTGI+LA L RA+GY CLIVMPDDQA EK  LLQ++GA VE VKPA I N  HY N+AR RA E+        F DQFE +AN   HY  TG E+W+Q         DAFVMSAGTGGTIAGVSR  KEM     +++ L DPPGS+L+NKV+  VCYA +Q ER VRRHRYD++AEGIG+DR+TANF  A VDDA+ V+D +AV+MA  LL+ +GLFVGSS+A+N V AVR A +LG GH +VTVLCDSGQRHLT+FW+ + ++ E     W  E   TDL F+
Sbjct:   50 LIGNTPLVLIPSLSKATGCRILAKAEFLNPGGSSKDRVAKGIIEDAEARGLLGPGGTIVEGTSGSTGISLALLARAKGYNCLIVMPDDQAKEKGELLQKFGATVEFVKPASIVNAKHYVNQARRRASEI----PGGYFADQFENLANTDIHYRTTGREIWQQTHGAL----DAFVMSAGTGGTIAGVSRYLKEM--NPAIQIVLADPPGSSLYNKVRHNVCYAPQQSERTVRRHRYDTVAEGIGIDRLTANFLLAHVDDAYVVSDADAVNMARHLLREDGLFVGSSSAVNCVAAVRLAKKLGPGHEIVTVLCDSGQRHLTKFWNDDHLKAE-----WQLEATATDLSFV 383          
BLAST of NO01G01580 vs. NCBI_GenBank
Match: XP_008870696.1 (hypothetical protein H310_07145 [Aphanomyces invadans] >ETW00561.1 hypothetical protein H310_07145 [Aphanomyces invadans])

HSP 1 Score: 408.3 bits (1048), Expect = 2.800e-110
Identity = 210/349 (60.17%), Postives = 262/349 (75.07%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWP-ERPWTDLRFL 407
            LIGNTPLV + SLSKATGCRILAKAE+LNPGG+SKDRVA  +I++AE   LL+ GGT+VEGTSGSTGI+LA L RA+GY+CLIVMPDDQA EK  LLQ++GA VE VKPA I N  HY N+AR RA E++       F DQFE +AN   HY  TG E+W+Q +     + D FVMSAGTGGTIAGVSR  KE      +++ L DPPGS+L+NKV+  VCYA +Q ER V+RHRYD++AEGIG+DR+TANF  A +DDA+ V+D+EAV+M+  LL  +G+FVGSS+AMN V AVR A +LG GH +VT+LCDSGQRHLT+FW+ ++++ +     W  E   TDL FL
Sbjct:   48 LIGNTPLVLIPSLSKATGCRILAKAEFLNPGGSSKDRVAKGIIEDAEARQLLQAGGTIVEGTSGSTGISLALLARAKGYKCLIVMPDDQAKEKGELLQKFGATVEFVKPASIVNAKHYVNQARRRASEIA----GGYFADQFENLANTEIHYRTTGREIWQQTQG----TLDGFVMSAGTGGTIAGVSRYLKEQ--NPAIQIVLADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTVAEGIGIDRLTANFLLANIDDAYVVSDEEAVNMSRHLLAEDGIFVGSSSAMNCVAAVRLAKKLGPGHIIVTILCDSGQRHLTKFWNNDYLKSQ-----WDLEATATDLSFL 381          
BLAST of NO01G01580 vs. NCBI_GenBank
Match: XP_024586443.1 (conserved oligomeric golgi complex [Plasmopara halstedii] >CEG50074.1 conserved oligomeric golgi complex [Plasmopara halstedii])

HSP 1 Score: 402.1 bits (1032), Expect = 2.000e-108
Identity = 204/351 (58.12%), Postives = 262/351 (74.64%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVR--WP-ERPWTDLRFL 407
            L+GNTP++EL SLSKATGC+ILAKAE+LNPGG+SKDR+A  +I++AER GLLK GGT++EGTSGSTGI+L+ + RA GYRC+IVMPDDQA EK +LL+ +GAEV +VKP  I N  H+ N A+  A+ +    K   F+DQFE  ANF +HY  TGPE+WRQ +       DAFVM+A  GGTIAG S   K+   +  ++V+L DPPGS+L+NKV+  VCYAS+Q E  VRRHRYD++ EG+G+DR+T NF  A++DDAF+VTDQE V+M+ FLL+ EG+FVGSS+ +N   AVRAA +LG GHT+VT+LCDSGQRHLT+FW       +EK +R  W  E   T L FL
Sbjct:  804 LVGNTPMIELTSLSKATGCKILAKAEFLNPGGSSKDRIAKCIIEDAERRGLLKKGGTIIEGTSGSTGISLSLIARAHGYRCIIVMPDDQAKEKKQLLELFGAEVILVKPTSIVNAKHFVNEAKRLARNI----KGGYFIDQFENTANFDSHYTTTGPEIWRQTQG----KVDAFVMAA--GGTIAGTSAYLKKQNPR--IRVFLADPPGSSLYNKVRSDVCYASQQAEAKVRRHRYDTIVEGVGIDRLTKNFMLAKIDDAFKVTDQEIVEMSRFLLREEGIFVGSSSGLNCAAAVRAAHKLGPGHTIVTILCDSGQRHLTKFW-------DEKHIREKWQLEAKATHLEFL 1135          
BLAST of NO01G01580 vs. NCBI_GenBank
Match: XP_002182880.1 (eukaryotic cysteine synthase [Phaeodactylum tricornutum CCAP 1055/1] >EEC45616.1 eukaryotic cysteine synthase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 379.8 bits (974), Expect = 1.100e-101
Identity = 199/341 (58.36%), Postives = 250/341 (73.31%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGK-NAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEA--RVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWP 397
            LIGNTPLV+L +LS+  G  +  K E LNPGGT KDR AL M +        K GG VVEGTSGSTGIALASLC+ RG+ C++V+PDDQA+EK R+L+  GAE  VV  A IANPNHY N AR  A   +++G   A+F+DQFE ++NF THY  TGPELWRQ +     + DAFVMS+GTGGTIAG+ R  KE      VKV LVDPPGSAL++K++ GV +A++Q+ER ++RHRYD+LAEGIGLDRVT N       +D A RV DQEAVDMAH+LL  EGL+VGSS+AMNVVGAVR A +L    T+VT++CD+GQRH+TRFW+R+++    +G+ WP
Sbjct:   13 LIGNTPLVKLSTLSRLVGRSVYVKMESLNPGGTGKDRAALAMRRS-------KTGGLVVEGTSGSTGIALASLCQRRGHACVVVLPDDQASEKQRILEALGAETYVVSNAAIANPNHYVNVARRLAVRANELGTVRAVFIDQFENVSNFDTHYEQTGPELWRQCK-----NLDAFVMSSGTGGTIAGIGRFLKEKHVS--VKVVLVDPPGSALYHKIQHGVAFANQQRERELKRHRYDTLAEGIGLDRVTNNLALGVDFIDSAIRVMDQEAVDMAHWLLANEGLWVGSSSAMNVVGAVRVALQLPSKSTIVTIICDAGQRHVTRFWNRDFI--LSRGLEWP 337          
BLAST of NO01G01580 vs. NCBI_GenBank
Match: GBG29719.1 (Cysteine synthase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 371.3 bits (952), Expect = 3.800e-99
Identity = 196/326 (60.12%), Postives = 235/326 (72.09%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEA--RVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWS 383
            LIG TPLV + SLS+ TGC +LAK E+LNPGG+SKDRVAL +++EAER G L PGGTVVEGTSGSTGI+LA +CRARGYRC+I+MPDDQA EK  LL + GAEVE+V+PA I N  HY N AR RA E+      AIF +QFE MANF  HY  TGPE+WR   E      DAFVMSAGTGGTIAGVS   K       V+V L D  GS+LF++V  GV Y  EQ ER +RRHR D+L EGIG+DR+TANF+     +D+A RV+DQE VDM+  LL  +GLFVGSS+A+N+  A   A  LG GHTVVTV+C SG R LT+ ++
Sbjct:   10 LIGETPLVRVASLSEETGCEVLAKCEFLNPGGSSKDRVALSIVEEAEREGRLGPGGTVVEGTSGSTGISLAQVCRARGYRCVIIMPDDQAIEKRELLSRLGAEVELVRPASIVNQGHYVNVARERAAEI----PGAIFANQFENMANFKMHYETTGPEIWRDAGERL----DAFVMSAGTGGTIAGVSMYLKAQNPD--VRVVLADCQGSSLFHRVNDGVLYTREQAERRLRRHRDDTLCEGIGIDRLTANFETGLPAIDEALRVSDQEVVDMSRHLLAHDGLFVGSSSALNLCAARETARRLGPGHTVVTVICGSGSRELTKLYN 325          
BLAST of NO01G01580 vs. NCBI_GenBank
Match: ORZ41328.1 (tryptophan synthase beta subunit-like PLP-dependent enzyme [Catenaria anguillulae PL171])

HSP 1 Score: 364.0 bits (933), Expect = 6.100e-97
Identity = 195/335 (58.21%), Postives = 238/335 (71.04%), Query Frame = 0
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGK--KVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEAR--VDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGE 390
            L+GNTPL+ L +LS  TGC I  KAEYLNPGG+SKDRVAL +++ A   GLL+PGGTV EGT GSTGI+LA +CRA GYR  IVMPDD A +KV +L++ GA VE V+P  I + NH+ N AR RAQE      N +F DQFE + N   H   TGPE+  Q E G  L  DAFVM AGTGGT+AGV+R  K       + ++V L DP GS LFNKVKFGV YA  + E   RRH+ D++ EGIGL+R+T+NF +A   VDDA RVTDQEAVDMA +L+  EGLFVGSS+A+NVV AVR A  LG G TVVT+LCDSG RHL++FW+ E++  E
Sbjct:   95 LVGNTPLIRLTTLSDLTGCDIYGKAEYLNPGGSSKDRVALSILRSAASRGLLRPGGTVYEGTVGSTGISLALMCRALGYRAHIVMPDDVARDKVDMLERLGATVERVRPVSIIDANHFVNLARRRAQE----DANGVFADQFENLDNVRVHLATTGPEIVEQTEGGRRL--DAFVMGAGTGGTLAGVARCVKRAAAALGRHIQVVLADPQGSGLFNKVKFGVLYAPTEAEGTRRRHQVDTVVEGIGLNRLTSNFAKALPFVDDAVRVTDQEAVDMARYLMLHEGLFVGSSSAVNVVAAVRVAKRLGAGKTVVTLLCDSGTRHLSKFWNDEYLSYE 423          
The following BLAST results are available for this feature:
BLAST of NO01G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETI49393.12.700e-11360.17hypothetical protein F443_06719 [Phytophthora para... [more]
ETO78126.12.700e-11360.17hypothetical protein F444_06786 [Phytophthora para... [more]
OQS01168.18.000e-11364.00cysteine synthase [Achlya hypogyna][more]
CBJ25649.15.200e-11263.72Cysteine synthase [Ectocarpus siliculosus][more]
XP_009826436.11.500e-11162.18hypothetical protein H257_03849 [Aphanomyces astac... [more]
XP_008870696.12.800e-11060.17hypothetical protein H310_07145 [Aphanomyces invad... [more]
XP_024586443.12.000e-10858.12conserved oligomeric golgi complex [Plasmopara hal... [more]
XP_002182880.11.100e-10158.36eukaryotic cysteine synthase [Phaeodactylum tricor... [more]
GBG29719.13.800e-9960.12Cysteine synthase [Aurantiochytrium sp. FCC1311][more]
ORZ41328.16.100e-9758.21tryptophan synthase beta subunit-like PLP-dependen... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008201NSK008201Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01580.1NO01G01580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576333gene_134Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100024g40gene1534Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01580.1NO01G01580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01580 ID=NO01G01580|Name=NO01G01580|organism=Nannochloropsis oceanica|type=gene|length=1239bp
ATGGCACCCGCTAGCAGCGGCAATCGCAGCGCGTCGTCCTTATCCCTTCT
GCTTGCCACTGCTATCTTTGCCTCCGCTTCAACTGTTGCTACCATTCTCC
TTCTTCCAGCTCTCCGTCGACGCCGTTCTCCGCCTCCCGGCACTCAGGAA
GAGAGTAATGGTGGCTATGCCGCCCTGATTGGCAATACCCCACTCGTTGA
GCTGCAGAGTCTGTCGAAAGCTACTGGGTGTCGTATCCTGGCTAAGGCTG
AGTACCTGAACCCTGGCGGTACAAGCAAGGACCGAGTGGCCTTGCGCATG
ATTCAAGAAGCGGAACGCGCCGGCTTGCTCAAGCCTGGGGGCACGGTGGT
GGAAGGCACGTCCGGGAGTACTGGTATTGCGTTAGCATCCTTGTGTCGGG
CGCGGGGGTACCGGTGCTTGATAGTCATGCCTGACGATCAGGCCGCGGAA
AAAGTGCGTTTACTCCAACAATACGGTGCCGAGGTCGAGGTGGTTAAACC
TGCCGGGATCGCCAACCCCAACCATTACTACAACCGTGCCCGGACCCGAG
CACAAGAACTTTCGCAGATGGGAAAAAATGCTATTTTTATGGATCAGTTT
GAAACAATGGCGAATTTTCATACGCATTACCATGGGACAGGCCCGGAATT
ATGGAGGCAGCTGGAGGAGGGGTTTGGATTGAGCCCGGATGCCTTTGTAA
TGTCGGCGGGGACGGGAGGGACGATTGCGGGTGTGAGTAGGTCATGGAAA
GAGATGAGAGGCAAGAAGGTGGTGAAGGTGTATTTGGTGGATCCGCCCGG
GTCGGCGCTGTTTAATAAGGTAAAGTTTGGGGTGTGTTATGCGAGTGAAC
AGAAGGAGAGGGGGGTGAGGAGGCACCGATATGATAGCTTGGCGGAAGGG
ATTGGTCTGGATAGGGTGACGGCGAACTTTCAAGAGGCGAGGGTTGATGA
TGCCTTTCGAGTGACAGATCAGGAGGCTGTCGACATGGCGCATTTTTTAC
TGCAGCGGGAGGGATTGTTTGTAGGGAGTTCAACCGCGATGAATGTGGTG
GGGGCCGTAAGGGCGGCCTGGGAATTGGGGAGGGGGCACACGGTGGTGAC
AGTGTTGTGCGATTCGGGTCAGAGACATTTGACGAGATTTTGGAGTCGGG
AATGGGTGGAGGGGGAGGAGAAGGGAGTGCGATGGCCTGAGAGGCCCTGG
ACGGACTTGAGGTTTTTAAAGAGAGTGGAGACGGAGTAG
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protein sequence of NO01G01580.1

>NO01G01580.1-protein ID=NO01G01580.1-protein|Name=NO01G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=413bp
MAPASSGNRSASSLSLLLATAIFASASTVATILLLPALRRRRSPPPGTQE
ESNGGYAALIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRM
IQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAE
KVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQF
ETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWK
EMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEG
IGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVV
GAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW
TDLRFLKRVETE*
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Synonyms
Publications