NO01G01580, NO01G01580 (gene) Nannochloropsis oceanica

Overview
NameNO01G01580
Unique NameNO01G01580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1239
Alignment locationchr1:398833..400071 +

Link to JBrowse

Properties
Property NameValue
DescriptionCysteine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:398833..400071 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR001926TrpB-like_PLP-dep
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: EWM29059.1 (cysteine synthase [Nannochloropsis gaditana])

HSP 1 Score: 537.7 bits (1384), Expect = 3.100e-149
Identity = 265/350 (75.71%), Postives = 303/350 (86.57%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPWTDLRFLKR 409
            LIGNTPL+EL SLS+AT CR+LAK EYLNPGGTSKDRVALRMIQEAE+A LL PG TV+EGTSGSTGIALASLCRARGYRCLIVMPDDQAAEK  LL+Q+GAEVE+VKPA IANPNHY NRAR RA+EL   G  A+FMDQFETMANF  HY GTGPE+W Q+  G+G  PDAFVMSAGTGGT+AGVSR+WKE   K  V+V+LVDPPGS+L++KVK GVCY++ Q+ERGVRRHRYDSLAEGIG+DR+TANF +AR+D+AF V+DQEAVDMAHFLLQ EG+FVGSSTA+N+VG VRAA  LG GHTVVTVLCDSGQRHLTRFW+R  VEG E  ++WPE P  +L FL++
Sbjct:   64 LIGNTPLIELTSLSRATECRVLAKVEYLNPGGTSKDRVALRMIQEAEKACLLHPGSTVIEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKAHLLKQFGAEVEIVKPASIANPNHYCNRARARAEEL---GDEAVFMDQFETMANFRAHYEGTGPEMWEQVVAGYGARPDAFVMSAGTGGTLAGVSRAWKEREEK--VQVFLVDPPGSSLYHKVKHGVCYSTAQRERGVRRHRYDSLAEGIGVDRLTANFGKARIDEAFHVSDQEAVDMAHFLLQAEGIFVGSSTAINLVGCVRAARVLGPGHTVVTVLCDSGQRHLTRFWNRRVVEGAE--LKWPETPPVNLNFLQK 406
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: ETK89268.1 (hypothetical protein L915_06592 [Phytophthora parasitica] >ETL42722.1 hypothetical protein L916_06530 [Phytophthora parasitica] >ETM49037.1 hypothetical protein L914_06503 [Phytophthora parasitica])

HSP 1 Score: 420.6 bits (1080), Expect = 5.500e-114
Identity = 211/349 (60.46%), Postives = 266/349 (76.22%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW-TDLRFL 407
            L+GNTPL+EL SLSKATGC+ILAKAE+LNPGG+SKDRVA  ++++AER GLLK GGT++EGTSGSTGI+L+ + RARGYRC+IVMPDDQA EK +LL+Q+GAEV +VKPA I N  HY N A+     L++  +   F DQFE  ANF +HY  TGPE+WRQ +     + DAFVM+AGTGGTIAG S   KE      V+V+L DPPGS+L+NKV+  VCYA +Q E  VRRHRYD++AEG+G+DR+T NF  A++DDAF+VTDQE V+M+ FLL+ EG+FVGSS+ +N V AVRAA +LG GHT+VTVLCDSGQRHLT+FW+ + +  +     W   P  T L FL
Sbjct:  826 LVGNTPLIELTSLSKATGCKILAKAEFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAK----RLARNTEGGYFTDQFENTANFDSHYTTTGPEIWRQTDG----TVDAFVMAAGTGGTIAGTSAYLKEKNPD--VQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKIDDAFKVTDQEIVEMSRFLLREEGIFVGSSSGLNCVAAVRAARKLGPGHTIVTVLCDSGQRHLTKFWNEQHIRED-----WQLEPTATHLEFL 1159
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: ETL95873.1 (hypothetical protein L917_06401 [Phytophthora parasitica] >KUF72795.1 Cysteine synthase 2 [Phytophthora nicotianae] >KUF86955.1 Cysteine synthase 2 [Phytophthora nicotianae])

HSP 1 Score: 420.6 bits (1080), Expect = 5.500e-114
Identity = 211/349 (60.46%), Postives = 266/349 (76.22%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW-TDLRFL 407
            L+GNTPL+EL SLSKATGC+ILAKAE+LNPGG+SKDRVA  ++++AER GLLK GGT++EGTSGSTGI+L+ + RARGYRC+IVMPDDQA EK +LL+Q+GAEV +VKPA I N  HY N A+     L++  +   F DQFE  ANF +HY  TGPE+WRQ +     + DAFVM+AGTGGTIAG S   KE      V+V+L DPPGS+L+NKV+  VCYA +Q E  VRRHRYD++AEG+G+DR+T NF  A++DDAF+VTDQE V+M+ FLL+ EG+FVGSS+ +N V AVRAA +LG GHT+VTVLCDSGQRHLT+FW+ + +  +     W   P  T L FL
Sbjct:   59 LVGNTPLIELTSLSKATGCKILAKAEFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAK----RLARNTEGGYFTDQFENTANFDSHYTTTGPEIWRQTDG----TVDAFVMAAGTGGTIAGTSAYLKEKNPD--VQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKIDDAFKVTDQEIVEMSRFLLREEGIFVGSSSGLNCVAAVRAARKLGPGHTIVTVLCDSGQRHLTKFWNEQHIRED-----WQLEPTATHLEFL 392
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: XP_008892344.1 (hypothetical protein PPTG_02809 [Phytophthora parasitica INRA-310] >ETN23146.1 hypothetical protein PPTG_02809 [Phytophthora parasitica INRA-310])

HSP 1 Score: 420.6 bits (1080), Expect = 5.500e-114
Identity = 211/349 (60.46%), Postives = 266/349 (76.22%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW-TDLRFL 407
            L+GNTPL+EL SLSKATGC+ILAKAE+LNPGG+SKDRVA  ++++AER GLLK GGT++EGTSGSTGI+L+ + RARGYRC+IVMPDDQA EK +LL+Q+GAEV +VKPA I N  HY N A+     L++  +   F DQFE  ANF +HY  TGPE+WRQ +     + DAFVM+AGTGGTIAG S   KE      V+V+L DPPGS+L+NKV+  VCYA +Q E  VRRHRYD++AEG+G+DR+T NF  A++DDAF+VTDQE V+M+ FLL+ EG+FVGSS+ +N V AVRAA +LG GHT+VTVLCDSGQRHLT+FW+ + +  +     W   P  T L FL
Sbjct:   74 LVGNTPLIELTSLSKATGCKILAKAEFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAK----RLARNTEGGYFTDQFENTANFDSHYTTTGPEIWRQTDG----TVDAFVMAAGTGGTIAGTSAYLKEKNPD--VQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKIDDAFKVTDQEIVEMSRFLLREEGIFVGSSSGLNCVAAVRAARKLGPGHTIVTVLCDSGQRHLTKFWNEQHIRED-----WQLEPTATHLEFL 407
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: ETP19166.1 (hypothetical protein F441_06722 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 420.6 bits (1080), Expect = 5.500e-114
Identity = 211/349 (60.46%), Postives = 266/349 (76.22%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW-TDLRFL 407
            L+GNTPL+EL SLSKATGC+ILAKAE+LNPGG+SKDRVA  ++++AER GLLK GGT++EGTSGSTGI+L+ + RARGYRC+IVMPDDQA EK +LL+Q+GAEV +VKPA I N  HY N A+     L++  +   F DQFE  ANF +HY  TGPE+WRQ +     + DAFVM+AGTGGTIAG S   KE      V+V+L DPPGS+L+NKV+  VCYA +Q E  VRRHRYD++AEG+G+DR+T NF  A++DDAF+VTDQE V+M+ FLL+ EG+FVGSS+ +N V AVRAA +LG GHT+VTVLCDSGQRHLT+FW+ + +  +     W   P  T L FL
Sbjct:  826 LVGNTPLIELTSLSKATGCKILAKAEFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAK----RLARNTEGGYFTDQFENTANFDSHYTTTGPEIWRQTDG----TVDAFVMAAGTGGTIAGTSAYLKEKNPD--VQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKIDDAFKVTDQEIVEMSRFLLREEGIFVGSSSGLNCVAAVRAARKLGPGHTIVTVLCDSGQRHLTKFWNEQHIRED-----WQLEPTATHLEFL 1159
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: ETP47094.1 (hypothetical protein F442_06755 [Phytophthora parasitica P10297])

HSP 1 Score: 419.5 bits (1077), Expect = 1.200e-113
Identity = 211/349 (60.46%), Postives = 265/349 (75.93%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW-TDLRFL 407
            L+GNTPL+EL SLSKATGC ILAKAE+LNPGG+SKDRVA  ++++AER GLLK GGT++EGTSGSTGI+L+ + RARGYRC+IVMPDDQA EK +LL+Q+GAEV +VKPA I N  HY N A+     L++  +   F DQFE  ANF +HY  TGPE+WRQ +     + DAFVM+AGTGGTIAG S   KE      V+V+L DPPGS+L+NKV+  VCYA +Q E  VRRHRYD++AEG+G+DR+T NF  A++DDAF+VTDQE V+M+ FLL+ EG+FVGSS+ +N V AVRAA +LG GHT+VTVLCDSGQRHLT+FW+ + +  +     W   P  T L FL
Sbjct:  826 LVGNTPLIELTSLSKATGCMILAKAEFLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCIIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAK----RLARNTEGGYFTDQFENTANFDSHYTTTGPEIWRQTDG----TVDAFVMAAGTGGTIAGTSAYLKEKNPD--VQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKIDDAFKVTDQEIVEMSRFLLREEGIFVGSSSGLNCVAAVRAARKLGPGHTIVTVLCDSGQRHLTKFWNEQHIRED-----WQLEPTATHLEFL 1159
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: XP_012196815.1 (hypothetical protein SPRG_02838 [Saprolegnia parasitica CBS 223.65] >KDO32361.1 hypothetical protein SPRG_02838 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 419.5 bits (1077), Expect = 1.200e-113
Identity = 218/352 (61.93%), Postives = 259/352 (73.58%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW--TDLRFLKR 409
            LIGNTPLV+L+SLS ATGC ILAKAE+LNPGG+SKDRVA  ++++AE  GLL PGGT+VEGTSGSTGI+LA + RA+GY+CLIVMPDDQA EK  LL Q+GA VE VKPA I N  HY N+AR RA E+        F DQFE +AN   HYH TG E+W Q         DA+VMSAGTGGTIAGVS   KE      V++ L DPPGS+L+NKV+  VCYA +Q ER V+RHRYD++AEGIG+DR+TANF  A +DDA+RVTDQEA+DM+ +LLQ EG+FVGSS+AMN V AVRAA  LG GH VVT+LCDSGQRHLT+FW+   +        W   P   TDL FL R
Sbjct:   45 LIGNTPLVKLKSLSAATGCTILAKAEFLNPGGSSKDRVAKGIVEDAEARGLLSPGGTIVEGTSGSTGISLALIARAKGYKCLIVMPDDQAKEKSDLLTQFGATVEFVKPASIVNAKHYVNQARRRASEI----PGGYFADQFENLANCDVHYHTTGREIWEQTNG----HVDAYVMSAGTGGTIAGVSLYLKEKNPN--VQIILADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTIAEGIGIDRLTANFTRAAIDDAYRVTDQEAIDMSRYLLQEEGIFVGSSSAMNCVAAVRAAKRLGPGHVVVTMLCDSGQRHLTKFWNEAHLADV-----WDLAPGHVTDLSFLDR 381
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: XP_002999267.1 (cysteine synthase, putative [Phytophthora infestans T30-4] >EEY69413.1 cysteine synthase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 418.7 bits (1075), Expect = 2.100e-113
Identity = 212/349 (60.74%), Postives = 263/349 (75.36%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW-TDLRFL 407
            L+GNTPL+EL SLSKATGC+ILAKAE LNPGG+SKDRVA  ++++AER GLLK GGT++EGTSGSTGI+L+ + RARGYRC+IVMPDDQA EK +LL+Q+GAEV +VKPA I N  HY N A+     L++  +   F DQFE  ANF +HY  TGPE+WRQ       S DAFVM+AGTGGTIAG S   KE      V+V+L DPPGS+L+NKV+  VCYA +Q E  VRRHRYD++AEG+G+DR+T NF  A+VDDAF+VTDQE V+M+ FLL+ EG+FVGSS+ +N   AVRAA +LG GHT+VTVLCDSGQRHLT+FW+ + +  +     W   P  T L FL
Sbjct:   56 LVGNTPLIELTSLSKATGCKILAKAELLNPGGSSKDRVAKGIVEDAERRGLLKEGGTIIEGTSGSTGISLSLMARARGYRCVIVMPDDQAKEKSQLLEQFGAEVVLVKPASIVNAKHYVNEAK----RLARNTEGGYFTDQFENTANFDSHYATTGPEIWRQTNG----SVDAFVMAAGTGGTIAGTSAYLKEQNPN--VQVFLADPPGSSLYNKVRSNVCYAPQQAETKVRRHRYDTIAEGVGIDRLTENFMLAKVDDAFKVTDQEIVEMSRFLLREEGIFVGSSSGLNCAAAVRAARKLGPGHTIVTVLCDSGQRHLTKFWNEQHIRED-----WQLEPTATHLEFL 389
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: OQS05790.1 (cysteine synthase [Thraustotheca clavata])

HSP 1 Score: 418.7 bits (1075), Expect = 2.100e-113
Identity = 209/326 (64.11%), Postives = 253/326 (77.61%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSRE 385
            LIGNTPL++L SLSKATGC I AKAE+LNPGG+SKDRVA  ++++AE  GLLKPGGT+VEGTSGSTGI+LA + RA+GY CLIVMPDDQA EK  LLQQ+GA VE VKPA I N NHY N+AR RA E+    +   F DQFE  AN + HY  TG E+W Q         DAFVMSAGTGGTIAGVS   K       V+V L DPPGS+L+NKV++ VCYA++Q ER V+RHRYD++AEGIG+DR+TANF +A++DDA+ VTDQEAVDM+ +LL  EG+FVGSS++MN V AV  A +LG GHT+VT+LCDSGQRHLT+FW+ E
Sbjct:   45 LIGNTPLIKLHSLSKATGCEIYAKAEFLNPGGSSKDRVAKGIVEDAEERGLLKPGGTIVEGTSGSTGISLALIARAKGYNCLIVMPDDQAKEKSDLLQQFGAVVEFVKPASIVNANHYVNQARQRANEI----QGGYFADQFENEANCNVHYKTTGREIWEQTNGKI----DAFVMSAGTGGTIAGVSLYLKHKNPN--VQVVLADPPGSSLYNKVRYNVCYAAQQSERTVKRHRYDTIAEGIGIDRLTANFLKAKIDDAYAVTDQEAVDMSRYLLHNEGIFVGSSSSMNCVAAVHLARKLGPGHTIVTILCDSGQRHLTKFWNNE 360
[Close]
BLAST of NO01G01580 vs. NCBI_GenBank
Match: XP_008604366.1 (cysteine synthase A [Saprolegnia diclina VS20] >EQC41797.1 cysteine synthase A [Saprolegnia diclina VS20])

HSP 1 Score: 418.3 bits (1074), Expect = 2.700e-113
Identity = 210/324 (64.81%), Postives = 253/324 (78.09%), Query Frame = 0 
Query:   59 LIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRMIQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAEKVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQFETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWKEMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEGIGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVVGAVRAAWELGRGHTVVTVLCDSGQRHLTRFWS 383
            LIGNTPLV+L+SLS ATGC ILAKAE+LNPGG+SKDRVA  ++++AE  GLL PGGT+VEGTSGSTGI+LA + RA+GY+CLIVMPDDQA EK  LL Q+GA VE VKPA I N  HY N+AR RA E+        F DQFE +AN   HY+ TG E+W Q +       DA+VMSAGTGGTIAGVS   KE      V+V L DPPGS+L+NKV+  VCYA +Q ER V+RHRYD++AEGIG+DR+TANF +AR+DDA+RVTDQEA+DM+ +LL  EG+FVGSS+AMN V AVRAA +LG GH VVT+LCDSGQRHLT+FW+
Sbjct:   45 LIGNTPLVKLKSLSAATGCTILAKAEFLNPGGSSKDRVAKGIVEDAEARGLLSPGGTIVEGTSGSTGISLALIARAKGYKCLIVMPDDQAKEKSDLLTQFGAAVEFVKPASIVNAKHYVNQARRRASEI----PGGYFADQFENLANCDVHYYTTGREIWEQTDG----QVDAYVMSAGTGGTIAGVSLYLKEK--NPAVQVILADPPGSSLYNKVRHNVCYAPQQSERTVKRHRYDTIAEGIGIDRLTANFAKARIDDAYRVTDQEAIDMSRYLLLEEGIFVGSSSAMNCVAAVRAAQKLGPGHVVVTMLCDSGQRHLTKFWN 358
The following BLAST results are available for this feature:
BLAST of NO01G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29059.13.100e-14975.71cysteine synthase [Nannochloropsis gaditana][more]
ETK89268.15.500e-11460.46hypothetical protein L915_06592 [Phytophthora para... [more]
ETL95873.15.500e-11460.46hypothetical protein L917_06401 [Phytophthora para... [more]
XP_008892344.15.500e-11460.46hypothetical protein PPTG_02809 [Phytophthora para... [more]
ETP19166.15.500e-11460.46hypothetical protein F441_06722 [Phytophthora para... [more]
ETP47094.11.200e-11360.46hypothetical protein F442_06755 [Phytophthora para... [more]
XP_012196815.11.200e-11361.93hypothetical protein SPRG_02838 [Saprolegnia paras... [more]
XP_002999267.12.100e-11360.74cysteine synthase, putative [Phytophthora infestan... [more]
OQS05790.12.100e-11364.11cysteine synthase [Thraustotheca clavata][more]
XP_008604366.12.700e-11364.81cysteine synthase A [Saprolegnia diclina VS20] >EQ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008201NSK008201Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01580.1NO01G01580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576333gene_134Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100024g40gene1534Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01580.1NO01G01580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01580 ID=NO01G01580|Name=NO01G01580|organism=Nannochloropsis oceanica|type=gene|length=1239bp
ATGGCACCCGCTAGCAGCGGCAATCGCAGCGCGTCGTCCTTATCCCTTCT
GCTTGCCACTGCTATCTTTGCCTCCGCTTCAACTGTTGCTACCATTCTCC
TTCTTCCAGCTCTCCGTCGACGCCGTTCTCCGCCTCCCGGCACTCAGGAA
GAGAGTAATGGTGGCTATGCCGCCCTGATTGGCAATACCCCACTCGTTGA
GCTGCAGAGTCTGTCGAAAGCTACTGGGTGTCGTATCCTGGCTAAGGCTG
AGTACCTGAACCCTGGCGGTACAAGCAAGGACCGAGTGGCCTTGCGCATG
ATTCAAGAAGCGGAACGCGCCGGCTTGCTCAAGCCTGGGGGCACGGTGGT
GGAAGGCACGTCCGGGAGTACTGGTATTGCGTTAGCATCCTTGTGTCGGG
CGCGGGGGTACCGGTGCTTGATAGTCATGCCTGACGATCAGGCCGCGGAA
AAAGTGCGTTTACTCCAACAATACGGTGCCGAGGTCGAGGTGGTTAAACC
TGCCGGGATCGCCAACCCCAACCATTACTACAACCGTGCCCGGACCCGAG
CACAAGAACTTTCGCAGATGGGAAAAAATGCTATTTTTATGGATCAGTTT
GAAACAATGGCGAATTTTCATACGCATTACCATGGGACAGGCCCGGAATT
ATGGAGGCAGCTGGAGGAGGGGTTTGGATTGAGCCCGGATGCCTTTGTAA
TGTCGGCGGGGACGGGAGGGACGATTGCGGGTGTGAGTAGGTCATGGAAA
GAGATGAGAGGCAAGAAGGTGGTGAAGGTGTATTTGGTGGATCCGCCCGG
GTCGGCGCTGTTTAATAAGGTAAAGTTTGGGGTGTGTTATGCGAGTGAAC
AGAAGGAGAGGGGGGTGAGGAGGCACCGATATGATAGCTTGGCGGAAGGG
ATTGGTCTGGATAGGGTGACGGCGAACTTTCAAGAGGCGAGGGTTGATGA
TGCCTTTCGAGTGACAGATCAGGAGGCTGTCGACATGGCGCATTTTTTAC
TGCAGCGGGAGGGATTGTTTGTAGGGAGTTCAACCGCGATGAATGTGGTG
GGGGCCGTAAGGGCGGCCTGGGAATTGGGGAGGGGGCACACGGTGGTGAC
AGTGTTGTGCGATTCGGGTCAGAGACATTTGACGAGATTTTGGAGTCGGG
AATGGGTGGAGGGGGAGGAGAAGGGAGTGCGATGGCCTGAGAGGCCCTGG
ACGGACTTGAGGTTTTTAAAGAGAGTGGAGACGGAGTAG
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protein sequence of NO01G01580.1

>NO01G01580.1-protein ID=NO01G01580.1-protein|Name=NO01G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=413bp
MAPASSGNRSASSLSLLLATAIFASASTVATILLLPALRRRRSPPPGTQE
ESNGGYAALIGNTPLVELQSLSKATGCRILAKAEYLNPGGTSKDRVALRM
IQEAERAGLLKPGGTVVEGTSGSTGIALASLCRARGYRCLIVMPDDQAAE
KVRLLQQYGAEVEVVKPAGIANPNHYYNRARTRAQELSQMGKNAIFMDQF
ETMANFHTHYHGTGPELWRQLEEGFGLSPDAFVMSAGTGGTIAGVSRSWK
EMRGKKVVKVYLVDPPGSALFNKVKFGVCYASEQKERGVRRHRYDSLAEG
IGLDRVTANFQEARVDDAFRVTDQEAVDMAHFLLQREGLFVGSSTAMNVV
GAVRAAWELGRGHTVVTVLCDSGQRHLTRFWSREWVEGEEKGVRWPERPW
TDLRFLKRVETE*
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Synonyms
Publications