NO01G01360, NO01G01360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01360 vs. NCBI_GenBank
Match: XP_002735498.1 (PREDICTED: glutathione S-transferase DHAR3, chloroplastic-like [Saccoglossus kowalevskii]) HSP 1 Score: 154.1 bits (388), Expect = 8.300e-34 Identity = 83/217 (38.25%), Postives = 117/217 (53.92%), Query Frame = 0 Query: 135 IELLCKAGPEGEALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKP-EWLMEGYGGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELEEEVKAAT---SGVFGAFARYVKNHDKAQDPPLQAALFEELGKADALLQKTGGPFLAGDRITLDDMALAPKLYHVKVGVAHFKNVIIPPDLDALAAYMRNMFDMEIFQESSYPPDIITWGW 348 +EL KAG +G LGDCPFCH +QMVL+ KGL Y+LVP+ + KP E+L GK+P L H+ DSA I YLE FP +P L K A S +F F Y+KN D + ++ L +EL K +++L + G +L GD + L D + PKLYHVK+ H+K +P + +L Y F+ E F ++ + I +GW Sbjct: 1 MELYVKAGRDGNTLGDCPFCHRIQMVLQLKGLDYQLVPINMQIKPREFLDMNPSGKVPVLYHNGVLMDDSAVIADYLERTFP----------EPSLAASTKVAENAGSNIFQRFTAYLKNKDPKKQDQMRDLLRDELQKLNSVLANSSGDYLDGDILKLPDCNILPKLYHVKIAARHYKKFEMPDEFPSLKKYFDLGFENEAFLKTKCEDEEIIFGW 207
BLAST of NO01G01360 vs. NCBI_GenBank
Match: XP_002295702.1 (dehydroascorbate reductase and valine--tRNA ligase-like protein-like protein [Thalassiosira pseudonana CCMP1335] >ACI64419.1 dehydroascorbate reductase and valine--tRNA ligase-like protein-like protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 148.3 bits (373), Expect = 4.500e-32 Identity = 103/306 (33.66%), Postives = 151/306 (49.35%), Query Frame = 0 Query: 66 FSGVFEPTTIGPNTRTIGTKDSRSSYSSGRSTSTGRNPLFSTTALASSARSTTGFGDARGRG---VRDG----QGRIELLCKAGPEGEALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKPEWLMEGYGGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELE------EEVKAATSGVFGAFARYVKN--HDKAQDPPLQAALFEELGKADALLQKTG--GPFLA--GDRITLDDMALAPKLYHVKVGVAHFKN--VIIPPDLDALAAYMRNMFDMEIFQES-SYPPDIITWGWGN 350 F + I PNTR++ SRS G S + N ++ S+ ARGRG + +G G + L K +G+++GDCPF H+V+MVL K L Y L+P E+KP+WL+E Y GKMP L H E Y DS I QYL++FF +DP+L E A G F + A++VK+ + +D Q AL E+L + L + G GP+L G+ TL D ++APKLY + V + K + + A+ Y ++F FQ + Y P+ + WGW + Sbjct: 17 FQSLSSQAFIAPNTRSV----SRSIIVGGESITNNINSRMTS--------SSPPLEMARGRGLERLEEGATPLPGGMTLYVKPAEDGKSVGDCPFAHFVRMVLHEKNLEYDLLPTTQENKPQWLLEDYDGKMPALRHRRECYVDSEVIAQYLDFFF----------QDPKLSVAGGETGEAAEAVDGFFPSMAKFVKHSPNGDEEDKEKQEALEEKLQTLNDFLSRDGRTGPYLVGNGETFTLLDCSMAPKLYAMDVCLEKIKENPIDLKGKYPAVRKYCDDVFARPSFQSTVEYGPETVVWGWSS 300
BLAST of NO01G01360 vs. NCBI_GenBank
Match: XP_023342051.1 (glutathione S-transferase DHAR2-like [Eurytemora affinis]) HSP 1 Score: 139.0 bits (349), Expect = 2.800e-29 Identity = 74/218 (33.94%), Postives = 122/218 (55.96%), Query Frame = 0 Query: 135 IELLCKAGPEGEALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKPEWLMEGYGGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELEEEVKAATSGVFGAFARYVKNHDKAQDPPLQAALFEELGKADALLQKTGGPFLAGDRITLDDMALAPKLYHVKVGVAHFKNVIIPPDLDA-LAAYMRNMFDMEIFQESSYPPDIITWGWGNAR 352 +EL KAGP+G ++GDCPF H+V+ VLR KGL ++P E KP WL++ GKMPCL EE T+S+ I +YLE + T E +++ +K A +F + A+++K + D L+ L EE+ + LQ + GP+L G +L D++LAPKLYH++ ++++ + + + Y + + +++ YP + + GW AR Sbjct: 1 MELYIKAGPDGTSVGDCPFAHFVRAVLRMKGLECTVIPCTQETKPVWLVQDCQGKMPCLRDGEERVTESSVIVKYLE----DKYQTTKIECSDDIDVMMKVAP--IFQSLAKFIKKIE--FDEELERNLIEEIRILENHLQTSTGPYLCGATPSLSDLSLAPKLYHLETTLSNYYPETLEKVMQGKVKEYTELVLSLPAVRDTLYPREYVLKGWEQAR 210
BLAST of NO01G01360 vs. NCBI_GenBank
Match: XP_005716892.1 (unnamed protein product [Chondrus crispus] >CDF37073.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 138.7 bits (348), Expect = 3.600e-29 Identity = 92/272 (33.82%), Postives = 130/272 (47.79%), Query Frame = 0 Query: 77 PNTRTIGTKDSRSSYSSGRSTSTGRNPLFSTTALASSARSTTGFGDARGRGVRDGQGRIELLCKAGPEGEALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKPEWLME-GYGGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELEEEVKAATSGVFGAFARYVKNHDKAQDPPLQAALFEELGKADALLQKTGGPFLAGDRITLDDMALAPKLYHVKVGVAHFKNVIIPPDLDALAAYMRNMFDMEIFQESSYPPDIITWGW 348 P+ T+ SRS SS ++ +T FS A A R T A + DG + L KAGP G+ +GDCPF + LR+K + + +KP W ++ G P V A DS I Y + E + E+DP + A S VFG+F R+VKN + +P ++A L E L + L + GPFL G+ I+ D LAPKL H+ V H+K IPPD L A++ M E ++ S+ D+I WGW Sbjct: 6 PSAPTLSLSPSRSLLSSFKTCTT-----FSPQAPARRRRPLTMTASA-PPPLEDG---MILFAKAGPGGKVMGDCPFTWKANLALRFKNTDFNTFYIDLANKPGWFLDLNENGSTPTFVDGPHAIGDSDEIVDYADKVGRKENLILTREDDPNWDAAFD-AVSPVFGSFIRFVKNKEPDNEPKVKAELTEALRGVNKFLAQGKGPFLLGETISALDCNLAPKLQHISVAAGHYKGYRIPPDCSDLQAFLERMRATEEWKASACTDDVIVWGW 267
BLAST of NO01G01360 vs. NCBI_GenBank
Match: EFJ10536.1 (hypothetical protein SELMODRAFT_159481 [Selaginella moellendorffii] >AIQ78400.1 dehydroascorbate reductase [Selaginella moellendorffii]) HSP 1 Score: 134.0 bits (336), Expect = 8.900e-28 Identity = 76/215 (35.35%), Postives = 116/215 (53.95%), Query Frame = 0 Query: 135 IELLCK-AGPEGEALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKPEWLMEGY-GGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELEEEVKAATSGVFGAFARYVKNHDKAQDPPLQAALFEELGKADALLQKTGGPFLAGDRITLDDMALAPKLYHVKVGVAHFKNVIIPPDLDALAAYMRNMFDMEIFQESSYPPDIITWGW 348 +E+L K A + LGDCPF V + L KG+ Y + E+KP W +E GK+P + D + DS ITQ +E FP +T E+ + S +F +F +++K+ D + +AAL EEL D L K GPF+ G I+ D++LAPKLYH+K+ + H+K +P +L L +YM +F E FQ++ P +++ GW Sbjct: 9 VEVLVKAANGDPSRLGDCPFSQRVLLTLEEKGIPYNSKFVDMENKPAWFLEANPEGKVPVVKDDGKWVADSDVITQLIETKFPSPSLVTPPEK--------SSVGSKIFSSFVKFLKSKDPSDGS--EAALLEELKTLDEYLAK-NGPFVNGSNISAVDLSLAPKLYHLKIALGHYKQWSVPQNLTNLNSYMEALFKRESFQKTMAPAEVVVKGW 212
BLAST of NO01G01360 vs. NCBI_GenBank
Match: XP_006822957.1 (PREDICTED: chloride intracellular channel protein 5-like [Saccoglossus kowalevskii]) HSP 1 Score: 134.0 bits (336), Expect = 8.900e-28 Identity = 75/225 (33.33%), Postives = 115/225 (51.11%), Query Frame = 0 Query: 135 IELLCKAGPEGEALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKPEWLME-GYGGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELEE-EVKAATSG--VFGAFARYVKNHDKAQDPPLQAALFEELGKADALLQKTGGP--FLAGDRITLDDMALAPKLYHVKVGVAHFKNVIIPPDLDALAAYMRNMFDMEIFQESSYPPDIITWGWGNARGQ 354 IEL +AG +G++LGDCPF + ++L K + + + + KP+ M+ GGK+P LV + TD + + YLE P +P L KA +G VF F+R++KN D +D L+ L +EL D+ L+ P FL GD +T D + PKL+H++V FK IP D + L Y+ + E F+++ YP D + GW G+ Sbjct: 11 IELFVRAGRDGKSLGDCPFSQRIFLILCLKKVSFNITTVDMNKKPKRFMDISPGGKIPVLVDGDRVLTDVSEMADYLEQTIP----------EPSLRSTNKKAMLAGIDVFQKFSRFIKNEDPQKDEILRKGLIKELLSLDSFLKSDNSPGCFLDGDTMTQLDCNMLPKLHHIRVASKRFKEFDIPEDFEGLRTYLNAAYATEEFKDTLYPDDEVVHGWNKHLGR 225
BLAST of NO01G01360 vs. NCBI_GenBank
Match: XP_002988446.2 (probable glutathione S-transferase DHAR1, cytosolic [Selaginella moellendorffii]) HSP 1 Score: 134.0 bits (336), Expect = 8.900e-28 Identity = 76/215 (35.35%), Postives = 116/215 (53.95%), Query Frame = 0 Query: 135 IELLCK-AGPEGEALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKPEWLMEGY-GGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELEEEVKAATSGVFGAFARYVKNHDKAQDPPLQAALFEELGKADALLQKTGGPFLAGDRITLDDMALAPKLYHVKVGVAHFKNVIIPPDLDALAAYMRNMFDMEIFQESSYPPDIITWGW 348 +E+L K A + LGDCPF V + L KG+ Y + E+KP W +E GK+P + D + DS ITQ +E FP +T E+ + S +F +F +++K+ D + +AAL EEL D L K GPF+ G I+ D++LAPKLYH+K+ + H+K +P +L L +YM +F E FQ++ P +++ GW Sbjct: 72 VEVLVKAANGDPSRLGDCPFSQRVLLTLEEKGIPYNSKFVDMENKPAWFLEANPEGKVPVVKDDGKWVADSDVITQLIETKFPSPSLVTPPEK--------SSVGSKIFSSFVKFLKSKDPSDGS--EAALLEELKTLDEYLAK-NGPFVNGSNISAVDLSLAPKLYHLKIALGHYKQWSVPQNLTNLNSYMEALFKRESFQKTMAPAEVVVKGW 275
BLAST of NO01G01360 vs. NCBI_GenBank
Match: EFJ19280.1 (hypothetical protein SELMODRAFT_271409 [Selaginella moellendorffii]) HSP 1 Score: 133.3 bits (334), Expect = 1.500e-27 Identity = 75/215 (34.88%), Postives = 116/215 (53.95%), Query Frame = 0 Query: 135 IELLCK-AGPEGEALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKPEWLMEGY-GGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELEEEVKAATSGVFGAFARYVKNHDKAQDPPLQAALFEELGKADALLQKTGGPFLAGDRITLDDMALAPKLYHVKVGVAHFKNVIIPPDLDALAAYMRNMFDMEIFQESSYPPDIITWGW 348 +E+L K A + LGDCPF V + L KG+ Y + E+KP W +E GK+P + D + DS ITQ ++ FP +T E+ + S +F +F +++K+ D + +AAL EEL D L K GPF+ G I+ D++LAPKLYH+K+ + H+K +P +L L +YM +F E FQ++ P +++ GW Sbjct: 9 VEVLVKAANGDPSRLGDCPFSQRVLLTLEEKGIPYNSKFVDMENKPAWFLEANPEGKVPVIKDDGKWVADSDVITQLIDTKFPSPSLVTPPEK--------SSVGSKIFSSFVKFLKSKDPSDGS--EAALLEELKALDEYLAK-NGPFVNGSNISAVDLSLAPKLYHLKIALGHYKQWSVPENLTNLNSYMEALFKRESFQKTMAPAEVVVKGW 212
BLAST of NO01G01360 vs. NCBI_GenBank
Match: XP_015877026.1 (PREDICTED: glutathione S-transferase DHAR1, mitochondrial-like [Ziziphus jujuba]) HSP 1 Score: 133.3 bits (334), Expect = 1.500e-27 Identity = 74/203 (36.45%), Postives = 109/203 (53.69%), Query Frame = 0 Query: 146 EALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKPEWLME-GYGGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELEEEVKAATSGVFGAFARYVKNHDKAQDPPLQAALFEELGKADALLQKTGGPFLAGDRITLDDMALAPKLYHVKVGVAHFKNVIIPPDLDALAAYMRNMFDMEIFQESSYPPDIITWGW 348 + LGDCPFC V + L K + Y+L+ + DKP+W +E GK+P + D++ +DS I LE FP +T E + S VFGAF ++K+ D + + AL EL D L K GP++AG+++T D+ALAPKLYH+ V + HFK +P DL L Y ++F +E FQ++ + GW Sbjct: 15 DVLGDCPFCQRVLLTLEGKKVPYKLILINLSDKPKWFLEVNPEGKVPVVKFDDKWVSDSDVIVGILEEKFPEPALVT--------PSEFSSVGSKVFGAFVTFLKSKDPSDGS--EQALLAELKALDEHL-KAHGPYVAGEKVTAVDLALAPKLYHLDVALGHFKKWTVPADLTHLHKYKESLFSLESFQKTKAEEKYVIAGW 206
BLAST of NO01G01360 vs. NCBI_GenBank
Match: XP_002979878.2 (probable glutathione S-transferase DHAR1, cytosolic [Selaginella moellendorffii]) HSP 1 Score: 133.3 bits (334), Expect = 1.500e-27 Identity = 75/215 (34.88%), Postives = 116/215 (53.95%), Query Frame = 0 Query: 135 IELLCK-AGPEGEALGDCPFCHYVQMVLRYKGLRYRLVPLAPEDKPEWLMEGY-GGKMPCLVHDEEAYTDSATITQYLEYFFPGEVPLTLEEEDPELEEEVKAATSGVFGAFARYVKNHDKAQDPPLQAALFEELGKADALLQKTGGPFLAGDRITLDDMALAPKLYHVKVGVAHFKNVIIPPDLDALAAYMRNMFDMEIFQESSYPPDIITWGW 348 +E+L K A + LGDCPF V + L KG+ Y + E+KP W +E GK+P + D + DS ITQ ++ FP +T E+ + S +F +F +++K+ D + +AAL EEL D L K GPF+ G I+ D++LAPKLYH+K+ + H+K +P +L L +YM +F E FQ++ P +++ GW Sbjct: 71 VEVLVKAANGDPSRLGDCPFSQRVLLTLEEKGIPYNSKFVDMENKPAWFLEANPEGKVPVIKDDGKWVADSDVITQLIDTKFPSPSLVTPPEK--------SSVGSKIFSSFVKFLKSKDPSDGS--EAALLEELKALDEYLAK-NGPFVNGSNISAVDLSLAPKLYHLKIALGHYKQWSVPENLTNLNSYMEALFKRESFQKTMAPAEVVVKGW 274 The following BLAST results are available for this feature:
BLAST of NO01G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01360 ID=NO01G01360|Name=NO01G01360|organism=Nannochloropsis oceanica|type=gene|length=1346bpback to top protein sequence of NO01G01360.1 >NO01G01360.1-protein ID=NO01G01360.1-protein|Name=NO01G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=354bpback to top Synonyms
Publications
|