NO01G01240, NO01G01240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
The following records are associated with this feature:
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01240 vs. NCBI_GenBank
Match: KPW27977.1 (Carbonic anhydrase [Pseudomonas amygdali] >KPX83595.1 Carbonic anhydrase [Pseudomonas amygdali pv. mellea]) HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31 Identity = 93/228 (40.79%), Postives = 124/228 (54.39%), Query Frame = 0 Query: 39 AYMDSPDIVKAQTTLEDRPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVA---RTLSEHPDIRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 A M+ P I A T R L TA +AL+ L+ GN AF++D+ + V R+ DR + + Q P I+I+CSDSRVPPE++F GELF++R AGNTVD A S+ Y V L PLVVV+GHEKCGAV AA+ E+ PG I ++ I + + D ++ NV RT SE + P D K+ VVGAYY+ +G V FFD Sbjct: 45 ALMELPSIANAATPTSPRTSL-----TADQALKALRDGNDAFMKDKEINVERNRDRRLEIAKGQTPFCILISCSDSRVPPELLFGRGLGELFIVRNAGNTVDTAALGSIEYGVSQLGVPLVVVMGHEKCGAVAAAVSVVEDNTVYPGAIGQMIEPILPAVLTAKSKKGTSLLED-----SVKANVQRTVARLRTASEPTLMNPIKD-GKVKVVGAYYSLENGKVDFFD 261
BLAST of NO01G01240 vs. NCBI_GenBank
Match: KXG86293.1 (carbonic anhydrase [Agrobacterium bohemicum]) HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31 Identity = 92/204 (45.10%), Postives = 117/204 (57.35%), Query Frame = 0 Query: 69 ALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNI------KRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 AL LLK GN AFLRDE+V R++ R + L Q P ++CSDSRVPPE++F GELF+IR AGNTVD +A S+ YAV L PLVVV+GHE CGAV AA+ E+ A PG I ++ I RG+E + + A+ NV V RTL E D ++P D K+ +VGAYY +G V FFD Sbjct: 6 ALDLLKEGNQAFLRDELVFADRNEARRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAVLGVPLVVVMGHESCGAVKAAMSVVEKNARFPGQIDNMIEPIIPAVLEARGMEGDATEN------------AVKQNVRRVVRTLREESDPLLLKPLAD-GKIKIVGAYYHLDTGAVDFFD 196
BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_081004093.1 (carbonic anhydrase [Pseudomonas amygdali]) HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31 Identity = 93/228 (40.79%), Postives = 124/228 (54.39%), Query Frame = 0 Query: 39 AYMDSPDIVKAQTTLEDRPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVA---RTLSEHPDIRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 A M+ P I A T R L TA +AL+ L+ GN AF++D+ + V R+ DR + + Q P I+I+CSDSRVPPE++F GELF++R AGNTVD A S+ Y V L PLVVV+GHEKCGAV AA+ E+ PG I ++ I + + D ++ NV RT SE + P D K+ VVGAYY+ +G V FFD Sbjct: 34 ALMELPSIANAATPTSPRTSL-----TADQALKALRDGNDAFMKDKEINVERNRDRRLEIAKGQTPFCILISCSDSRVPPELLFGRGLGELFIVRNAGNTVDTAALGSIEYGVSQLGVPLVVVMGHEKCGAVAAAVSVVEDNTVYPGAIGQMIEPILPAVLTAKSKKGTSLLED-----SVKANVQRTVARLRTASEPTLMNPIKD-GKVKVVGAYYSLENGKVDFFD 250
BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_082760141.1 (carbonic anhydrase [Agrobacterium bohemicum]) HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31 Identity = 92/204 (45.10%), Postives = 117/204 (57.35%), Query Frame = 0 Query: 69 ALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNI------KRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 AL LLK GN AFLRDE+V R++ R + L Q P ++CSDSRVPPE++F GELF+IR AGNTVD +A S+ YAV L PLVVV+GHE CGAV AA+ E+ A PG I ++ I RG+E + + A+ NV V RTL E D ++P D K+ +VGAYY +G V FFD Sbjct: 55 ALDLLKEGNQAFLRDELVFADRNEARRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAVLGVPLVVVMGHESCGAVKAAMSVVEKNARFPGQIDNMIEPIIPAVLEARGMEGDATEN------------AVKQNVRRVVRTLREESDPLLLKPLAD-GKIKIVGAYYHLDTGAVDFFD 245
BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_103089070.1 (carbonic anhydrase [Agrobacterium bohemicum]) HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31 Identity = 92/204 (45.10%), Postives = 117/204 (57.35%), Query Frame = 0 Query: 69 ALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNI------KRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 AL LLK GN AFLRDE+V R++ R + L Q P ++CSDSRVPPE++F GELF+IR AGNTVD +A S+ YAV L PLVVV+GHE CGAV AA+ E+ A PG I ++ I RG+E + + A+ NV V RTL E D ++P D K+ +VGAYY +G V FFD Sbjct: 55 ALDLLKEGNQAFLRDELVFADRNEARRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAVLGVPLVVVMGHESCGAVKAAMSVVEKNARFPGQIDNMIEPIIPAVLEARGMEGDATEN------------AVKQNVRRVVRTLREESDPLLLKPLAD-GKIKIVGAYYHLDTGAVDFFD 245
BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_103657143.1 (carbonic anhydrase [Agrobacterium rosae] >POO53424.1 carbonic anhydrase [Agrobacterium rosae]) HSP 1 Score: 146.0 bits (367), Expect = 2.100e-31 Identity = 95/221 (42.99%), Postives = 123/221 (55.66%), Query Frame = 0 Query: 47 VKAQTTLEDRPELERKGE-TAAEALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 ++ T L P + K T AL+LLK GN AFLRDE+V R++ R + L Q P ++CSDSRVPPE++F GELF+IR AGNTVD +A S+ YAV L PLVVV+GHE CGAV AA+ E+ A PG I ++ I + A + A+ NV V RTL E D ++P D K+ +VGAYY +G V FFD Sbjct: 32 LRQATPLTPAPVKDGKSALTPDGALKLLKEGNEAFLRDELVFADRNEARRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAVLGVPLVVVMGHESCGAVKAAMSVVEKNARFPGQIDNMIEPIIPAV------LEARGQAGDATENAVKQNVRRVVRTLREESDPLLLKPLAD-GKIKIVGAYYHLDTGAVDFFD 245
BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_103586698.1 (carbonic anhydrase [Agrobacterium rosae] >POO54895.1 carbonic anhydrase [Agrobacterium rosae]) HSP 1 Score: 146.0 bits (367), Expect = 2.100e-31 Identity = 95/221 (42.99%), Postives = 123/221 (55.66%), Query Frame = 0 Query: 47 VKAQTTLEDRPELERKGE-TAAEALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 ++ T L P + K T AL+LLK GN AFLRDE+V R++ R + L Q P ++CSDSRVPPE++F GELF+IR AGNTVD +A S+ YAV L PLVVV+GHE CGAV AA+ E+ A PG I ++ I + A + A+ NV V RTL E D ++P D K+ +VGAYY +G V FFD Sbjct: 32 LRQATPLTPAPVKDGKSALTPDGALKLLKEGNEAFLRDELVFADRNEARRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAVLGVPLVVVMGHESCGAVKAAMSVVEKNARFPGQIDNMIEPIIPAV------LEARGQAGDATENAVKQNVRRVVRTLREESDPLLLKPLAD-GKIKIVGAYYHLDTGAVDFFD 245
BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_083716386.1 (carbonic anhydrase [Agrobacterium sp. DSM 25558] >SCX15218.1 Carbonic anhydrase [Agrobacterium sp. DSM 25558]) HSP 1 Score: 145.6 bits (366), Expect = 2.700e-31 Identity = 95/221 (42.99%), Postives = 123/221 (55.66%), Query Frame = 0 Query: 47 VKAQTTLEDRPELERKGE-TAAEALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 ++ T L P + K T AL+LLK GN AFLRDE+V R++ R + L Q P ++CSDSRVPPE++F GELF+IR AGNTVD +A S+ YAV L PLVVV+GHE CGAV AA+ E+ A PG I ++ I + A + A+ NV V RTL E D ++P D K+ +VGAYY +G V FFD Sbjct: 32 LRQATPLTPAPVKDGKSALTPDGALKLLKEGNDAFLRDELVFADRNEARRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAVLGVPLVVVMGHESCGAVKAAMSVVEKNARFPGQIDNMIEPIIPAV------LEARGQAGDATENAVKQNVRRVVRTLREESDPLLLKPLAD-GKIKIVGAYYHLDTGAVDFFD 245
BLAST of NO01G01240 vs. NCBI_GenBank
Match: KPX46120.1 (Carbonic anhydrase [Pseudomonas syringae pv. helianthi] >KPY88431.1 Carbonic anhydrase [Pseudomonas syringae pv. tagetis]) HSP 1 Score: 145.2 bits (365), Expect = 3.500e-31 Identity = 92/228 (40.35%), Postives = 123/228 (53.95%), Query Frame = 0 Query: 39 AYMDSPDIVKAQTTLEDRPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVA---RTLSEHPDIRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 A M+ P I A R L TA +AL+ L+ GN AF++D+ + V R+ DR + + Q P I+I+CSDSRVPPE++F GELF++R AGNTVD A S+ Y V L PLVVV+GHEKCGAV AA+ E+ PG I ++ I + + D ++ NV RT SE + P D K+ VVGAYY+ +G V FFD Sbjct: 29 ALMELPSIANAAAPTSPRTSL-----TAEQALKALRDGNDAFMKDKEINVERNRDRRLEIAKGQTPFCILISCSDSRVPPELLFGRGLGELFIVRNAGNTVDTAALGSIEYGVSQLGVPLVVVMGHEKCGAVAAAVSVVEDNTVYPGAIGQMIEPILPAVLTAKSKKGTSLLED-----SVKANVQRTVARLRTASEPTLMNPIKD-GKVKVVGAYYSLENGKVDFFD 245
BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_054985883.1 (carbonic anhydrase [Pseudomonas syringae group genomosp. 7]) HSP 1 Score: 145.2 bits (365), Expect = 3.500e-31 Identity = 92/228 (40.35%), Postives = 123/228 (53.95%), Query Frame = 0 Query: 39 AYMDSPDIVKAQTTLEDRPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVA---RTLSEHPDIRPFIDRRKLSVVGAYYAF-SGVVSFFD 262 A M+ P I A R L TA +AL+ L+ GN AF++D+ + V R+ DR + + Q P I+I+CSDSRVPPE++F GELF++R AGNTVD A S+ Y V L PLVVV+GHEKCGAV AA+ E+ PG I ++ I + + D ++ NV RT SE + P D K+ VVGAYY+ +G V FFD Sbjct: 22 ALMELPSIANAAAPTSPRTSL-----TAEQALKALRDGNDAFMKDKEINVERNRDRRLEIAKGQTPFCILISCSDSRVPPELLFGRGLGELFIVRNAGNTVDTAALGSIEYGVSQLGVPLVVVMGHEKCGAVAAAVSVVEDNTVYPGAIGQMIEPILPAVLTAKSKKGTSLLED-----SVKANVQRTVARLRTASEPTLMNPIKD-GKVKVVGAYYSLENGKVDFFD 238 The following BLAST results are available for this feature:
BLAST of NO01G01240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01240 ID=NO01G01240|Name=NO01G01240|organism=Nannochloropsis oceanica|type=gene|length=1481bpback to top protein sequence of NO01G01240.1 >NO01G01240.1-protein ID=NO01G01240.1-protein|Name=NO01G01240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bpback to top Synonyms
The feature 'NO01G01240' has the following synonyms
Publications
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