NO01G01240, NO01G01240 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G01240
Unique Name	NO01G01240
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1481
Alignment location	chr1:318767..320247 -

Link to JBrowse

Properties


Property Name	Value
Description	Carbonic anhydrase

Mutants

The following records are associated with this feature:


Title	Method	Accession date	Last modified date
CA2-knockdown	RNAi	2019-05-10	2019-05-10
SCL of carbonic anhydrase CA2	Subcellular Localization	2019-05-10	2020-04-01

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:318767..320247 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0004089	carbonate dehydratase activity
GO:0005488	binding
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036874	Carbonic_anhydrase_sf
IPR001765	Carbonic_anhydrase

Vocabulary: **Biological Process**
Term	Definition
GO:0008150	biological_process

Homology

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: EWM29063.1 (carbonic anhydrase [Nannochloropsis gaditana])

HSP 1 Score: 447.6 bits (1150), Expect = 3.300e-122
Identity = 236/320 (73.75%), Postives = 262/320 (81.88%), Query Frame = 0

Query:    1 MLTSIRSHLDDQEVKIQEQLFRFQGIKRAIDRICKNDEAYMDSPDIVKAQTTLEDRPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRSDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPDIRPFIDRRKLSVVGAYYAFSGVVSFFDDQDEGGRMERGRVFGGVEGNGSLCLSCSGTLSGNSSPMAGGGSKGSSPPPSVQDGVNKS 321
            +L  IR HLDDQE KI EQL RFQ IK+A++RICKND+AYM SPDIVKAQTTLED P LERKG TAAEAL LLK GNAAFLRDEV     SDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNT+DALARASLLYAVQHL SPLVVVLGHEKCGAVTAALQP E LA+AP DIKTLV+ I+ GIEC L++P      DERLLCAIVCNVH VARTLSEHPDIRPFI+++ LSVVGAYYAF+GVVSFFDD ++G    +  V   V G  SLC+SCSGT+  +SSP A    K +S   SV +G++K+
Sbjct:   20 VLERIRHHLDDQEHKIHEQLNRFQLIKKAVERICKNDDAYMQSPDIVKAQTTLEDSP-LERKGNTAAEALELLKAGNAAFLRDEVPAKQCSDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSFFDDGEDGNATGK-EVGSTVNGQASLCMSCSGTIHRSSSPTADPSQKVNS-RLSVSEGLSKN 336

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_079907548.1 (carbonic anhydrase [Carboxydocella sp. JDF658] >GAW32237.1 hypothetical protein JDF658_20020 [Carboxydocella sp. JDF658])

HSP 1 Score: 152.5 bits (384), Expect = 2.200e-33
Identity = 91/209 (43.54%), Postives = 128/209 (61.24%), Query Frame = 0

Query:   56 RPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRSD--RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPDIRPFIDRRKLSVVGA-YYAFSGVVSFFD 262
            RPE+ +  +   EAL LLK GNA F  D+V+P +  D  R       Q P AII++CSDSRVPPE++F+ A G+LFV+R+AGN VD +A  S+ YA +HL +PL+VVLGHEKCGAVTAA++  E    APG I ++V  IK  +E      +  + GD+ +      NV      L + P I+  +++ KL +VGA Y+  SG V + +
Sbjct:   52 RPEIIKNPD---EALNLLKDGNARFASDKVLPDNLGDERREELKKNGQHPFAIIVSCSDSRVPPEIVFDQALGDLFVVRVAGNVVDPVATGSVEYAAEHLGTPLIVVLGHEKCGAVTAAVKGGE----APGSIGSIVEKIKPSVEKA---KATGLAGDQLVEKTAELNVEASMVELEKSPIIKELVEQGKLKIVGAKYHLGSGQVEWLE 250

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: OUT54018.1 (carbonic anhydrase [Rhodopirellula sp. TMED11])

HSP 1 Score: 151.4 bits (381), Expect = 4.900e-33
Identity = 86/200 (43.00%), Postives = 121/200 (60.50%), Query Frame = 0

Query:   66 AAEALRLLKVGNAAFLRDEVVPVHRSD--RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPDIRPFIDRRKLSVVGAYY-AFSGVVSFFDD 263
            A +AL+ LK GN  F+  +    H +   RH+ L   Q P A+++ CSDSRVPPE+IF+  FG+LFV+R+AGN VD    AS+ YA+ HL + L+VV+GH  CGAVTA L     + D P ++ +L+  I+  I    IDP+  +  D+R+ CA+  NV    R LS  PD+R  ID  K+ +VGA Y   SG + F D+
Sbjct:   69 ALDALKRLKDGNERFVSGKPRHPHETTAWRHL-LESGQHPFAVVLGCSDSRVPPELIFDQGFGDLFVVRVAGNVVDTDVTASVEYAIDHLDTQLIVVMGHSHCGAVTATLDHLTNIDDEPAEVVSLLYRIEPAILG--IDPA--LPRDQRIDCAVKKNVELAVRRLSRVPDLRRSIDAGKIKIVGAVYDMHSGKIDFQDE 263

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_092989696.1 (carbonic anhydrase [Rhizobium sp. NFR03] >SES39024.1 carbonic anhydrase [Rhizobium sp. NFR03])

HSP 1 Score: 149.8 bits (377), Expect = 1.400e-32
Identity = 93/207 (44.93%), Postives = 121/207 (58.45%), Query Frame = 0

Query:   65 TAAEALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGI---ECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFDDQ 264
            T  EAL LLK GN AFLR+E+V  +R++ R + L   Q P    ++CSDSRVPPE++F    GELF+IR AGNTVD +A  S+ YAV  L  PL+VV+GHE CGAV AA+   E  A  PG I  ++  I   +     +  DP+ +         A+  NV  V RTL E  D   ++P  + R + VVGAYY   +GVV FFD Q
Sbjct:   50 TPDEALDLLKQGNEAFLRNELVYPNRTETRRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAELGVPLIVVMGHESCGAVKAAMAVVESNARFPGQIDNMIEPIIPAVLEARGQTGDPTEN---------AVRQNVRRVVRTLREESDPLLLKPLAEGR-IKVVGAYYRLDTGVVEFFDQQ 246

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_092937505.1 (carbonic anhydrase [Rhizobium sp. 9140] >CZT37072.1 carbonic anhydrase [Rhizobium sp. 9140])

HSP 1 Score: 149.1 bits (375), Expect = 2.400e-32
Identity = 98/230 (42.61%), Postives = 128/230 (55.65%), Query Frame = 0

Query:   41 MDSPDIVKAQTTLEDRPELERKGE-TAAEALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGI---ECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFD 262
            + + ++  A   L   P  + K   T  EAL LLK GN AFLR+E+V  +R++ R + L   Q P    ++CSDSRVPPE++F    GELF+IR AGNTVD +A  S+ YAV  L  PLVVV+GHE CGAV AA+   E  A  PG I  ++  I   +     +  DP+ +         A+  NV  V RTL E  D   + P  D R + VVGAYY   +GVV FFD
Sbjct:   25 LQAQEVGTAAVPLAPAPAKDGKSTLTPDEALELLKAGNEAFLRNELVYPNRTETRRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAELGVPLVVVMGHESCGAVKAAMAVVESNARFPGQIDNMIEPIIPAVLEARGQTGDPTEN---------AVRQNVRRVVRTLREESDPLLLTPLSDGR-VKVVGAYYRLDTGVVEFFD 244

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_079933376.1 (MULTISPECIES: carbonic anhydrase [Carboxydocella] >GAW29040.1 hypothetical protein ULO1_16100 [Carboxydocella sp. ULO1] >AVX29898.1 carbonic anhydrase [Carboxydocella thermautotrophica])

HSP 1 Score: 148.7 bits (374), Expect = 3.200e-32
Identity = 88/209 (42.11%), Postives = 128/209 (61.24%), Query Frame = 0

Query:   56 RPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRSD--RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPDIRPFIDRRKLSVVGA-YYAFSGVVSFFD 262
            RPE+ +  +   EAL LLK GNA F  ++V+P +  D  R       Q P AII++CSDSRVPPE+IF+ A G+LFVIR+AGN +D +A  S+ YA +HL +PL+VV+GHEKCGAVTAA++  E     PG I +++  IK  +E      +  + GD+ +  +   NV      L + P I+  +++ KL +VGA Y+  SG V + +
Sbjct:   52 RPEIIKNPD---EALNLLKDGNARFAGEKVLPDNLGDERREELKKNGQHPFAIIVSCSDSRVPPEIIFDQALGDLFVIRVAGNVIDPVATGSVEYAAEHLGTPLIVVMGHEKCGAVTAAVKGGE----VPGSIGSIIEKIKPSVEKA---KATGLAGDQLVEKSTELNVEASMVELEKSPIIKELVEQGKLKIVGAKYHLGSGQVEWLE 250

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_078665410.1 (MULTISPECIES: carbonic anhydrase [Carboxydocella] >SJZ92434.1 carbonic anhydrase [Carboxydocella sporoproducens DSM 16521] >AVX19480.1 carbonic anhydrase [Carboxydocella thermautotrophica])

HSP 1 Score: 148.7 bits (374), Expect = 3.200e-32
Identity = 88/209 (42.11%), Postives = 128/209 (61.24%), Query Frame = 0

Query:   56 RPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRSD--RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPDIRPFIDRRKLSVVGA-YYAFSGVVSFFD 262
            RPE+ +  +   EAL LLK GNA F  ++V+P +  D  R       Q P AII++CSDSRVPPE+IF+ A G+LFVIR+AGN +D +A  S+ YA +HL +PL+VV+GHEKCGAVTAA++  E     PG I +++  IK  +E      +  + GD+ +  +   NV      L + P I+  +++ KL +VGA Y+  SG V + +
Sbjct:   52 RPEIIKNPD---EALNLLKDGNARFAGEKVLPDNLGDERREELKKNGQHPFAIIVSCSDSRVPPEIIFDQALGDLFVIRVAGNVIDPVATGSVEYAAEHLGTPLIVVMGHEKCGAVTAAVKGGE----VPGSIGSIIEKIKPSVEKA---KATGLAGDQLVEKSTELNVEASMVELEKSPIIKELVEQGKLKIVGAKYHLGSGQVEWLE 250

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: KQS67542.1 (carbonic anhydrase [Rhizobium sp. Leaf371])

HSP 1 Score: 147.1 bits (370), Expect = 9.200e-32
Identity = 90/205 (43.90%), Postives = 121/205 (59.02%), Query Frame = 0

Query:   65 TAAEALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGI---ECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFD 262
            T  EAL LLK GN AFLR+E+V  +R++ R + L   Q P    ++CSDSRVPPE++F    GELF+IR AGNTVD +A  S+ YAV  L  PL+V++GHE CGAV AA+   +  A  PG I  ++  I   +     ++ DP+ +         A+  NV  V RTL E  D   ++P  + R + VVGAYY   +GVV FFD
Sbjct:    2 TPDEALDLLKRGNEAFLRNELVYPNRTEMRRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAELGVPLIVIMGHESCGAVKAAMAVVDSNARFPGQIDNMIEPIIPAVLEARGQMGDPTEN---------AVRQNVRRVVRTLREESDPLLLKPLAEGR-IKVVGAYYRLDTGVVEFFD 196

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: WP_082477161.1 (carbonic anhydrase [Rhizobium sp. Leaf371])

HSP 1 Score: 147.1 bits (370), Expect = 9.200e-32
Identity = 90/205 (43.90%), Postives = 121/205 (59.02%), Query Frame = 0

Query:   65 TAAEALRLLKVGNAAFLRDEVVPVHRSD-RHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGI---ECELIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPD---IRPFIDRRKLSVVGAYYAF-SGVVSFFD 262
            T  EAL LLK GN AFLR+E+V  +R++ R + L   Q P    ++CSDSRVPPE++F    GELF+IR AGNTVD +A  S+ YAV  L  PL+V++GHE CGAV AA+   +  A  PG I  ++  I   +     ++ DP+ +         A+  NV  V RTL E  D   ++P  + R + VVGAYY   +GVV FFD
Sbjct:   50 TPDEALDLLKRGNEAFLRNELVYPNRTEMRRLELAKGQAPFCAYVSCSDSRVPPELLFGRGLGELFIIRNAGNTVDTVAMGSIEYAVAELGVPLIVIMGHESCGAVKAAMAVVDSNARFPGQIDNMIEPIIPAVLEARGQMGDPTEN---------AVRQNVRRVVRTLREESDPLLLKPLAEGR-IKVVGAYYRLDTGVVEFFD 244

[Close]

BLAST of NO01G01240 vs. NCBI_GenBank
Match: KPB12469.1 (Carbonic anhydrase [Pseudomonas amygdali pv. sesami] >KPY62843.1 Carbonic anhydrase [Pseudomonas amygdali pv. sesami])

HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31
Identity = 93/228 (40.79%), Postives = 124/228 (54.39%), Query Frame = 0

Query:   39 AYMDSPDIVKAQTTLEDRPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAVQHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECELIDPSAHIFGDERLLCAIVCNVHYVA---RTLSEHPDIRPFIDRRKLSVVGAYYAF-SGVVSFFD 262
            A M+ P I  A T    R  L     TA +AL+ L+ GN AF++D+ + V R+ DR + +   Q P  I+I+CSDSRVPPE++F    GELF++R AGNTVD  A  S+ Y V  L  PLVVV+GHEKCGAV AA+   E+    PG I  ++  I   +          +  D     ++  NV       RT SE   + P  D  K+ VVGAYY+  +G V FFD
Sbjct:   22 ALMELPSIANAATPTSPRTSL-----TADQALKALRDGNDAFMKDKEINVERNRDRRLEIAKGQTPFCILISCSDSRVPPELLFGRGLGELFIVRNAGNTVDTAALGSIEYGVSQLGVPLVVVMGHEKCGAVAAAVSVVEDNTVYPGAIGQMIEPILPAVLTAKSKKGTSLLED-----SVKANVQRTVARLRTASEPTLMNPIKD-GKVKVVGAYYSLENGKVDFFD 238

The following BLAST results are available for this feature:

BLAST of NO01G01240 vs. NCBI_GenBank

BLAST of NO01G01240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM29063.1	3.300e-122	73.75	carbonic anhydrase [Nannochloropsis gaditana]	[more]
WP_079907548.1	2.200e-33	43.54	carbonic anhydrase [Carboxydocella sp. JDF658] >GA...	[more]
OUT54018.1	4.900e-33	43.00	carbonic anhydrase [Rhodopirellula sp. TMED11]	[more]
WP_092989696.1	1.400e-32	44.93	carbonic anhydrase [Rhizobium sp. NFR03] >SES39024...	[more]
WP_092937505.1	2.400e-32	42.61	carbonic anhydrase [Rhizobium sp. 9140] >CZT37072....	[more]
WP_079933376.1	3.200e-32	42.11	MULTISPECIES: carbonic anhydrase [Carboxydocella] ...	[more]
WP_078665410.1	3.200e-32	42.11	MULTISPECIES: carbonic anhydrase [Carboxydocella] ...	[more]
KQS67542.1	9.200e-32	43.90	carbonic anhydrase [Rhizobium sp. Leaf371]	[more]
WP_082477161.1	9.200e-32	43.90	carbonic anhydrase [Rhizobium sp. Leaf371]	[more]
KPB12469.1	1.200e-31	40.79	Carbonic anhydrase [Pseudomonas amygdali pv. sesam...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL006	nonsL006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR047	ncniR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008239	NSK008239	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G01240.1	NO01G01240.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|576219	gene_99	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100024g5	gene1565	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G01240.1	NO01G01240.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO01G01240 ID=NO01G01240|Name=NO01G01240|organism=Nannochloropsis oceanica|type=gene|length=1481bp
ATGCTCACCAGCATCCGCAGCCACCTAGACGACCAAGAGGTCAAGATCCA
GGAACAATTATTTCGCTTCCAGGGCATTAAGAGgtacgtagataggggga
gaggggaagagacatatgatgcgctggcggggtgcaagctgatcgatgga
atctccgttcttatcacatacatcatcacagGGCCATTGACCGCATTTGC
AAGAATGACGAGGCCTACATGGACTCCCCCGATATTGTCAAGGCACAGAC
CACGCTCGAAGATCGCCCGGAGCTGGAAAGGAAAGGAGAGACTgtacgta
catatgggacgtggaacatacaacagatccccgacctccccgccctgtct
cacacccatccccccacccccttcctttcccacttctatagGCTGCTGAA
GCCTTGCGCCTGCTCAAAGTGGGCAACGCTGCCTTTTTGCGCGATGAGGT
TGTGCCTGTCCACCGCTCTGACAGACATATTGGCCTACATTTTGCCCAGA
AACCCCACGCCATAATTATTGCTTGTTCCGACTCTCGGGTCCCGCCGGAG
ATGATCTTTAATTGCGCGTTTGGTGAACTgtaagttcatatgttgatcgg
atattgatagccgggtacttatgtttttattcgctccccgcccatttttc
tttaagctggcctatctcatctttttcctctccaccaataataaccagCT
TCGTCATCCGCCTTGCCGGCAACACCGTCGATGCACTCGCTCGCGCCAGC
CTCCTTTACGCGGTGCAACACCTCCAATCTCCCCTGGTCGTTGTTCTGGG
CCACGAAAAGTGCGGCGCCGTCACAGCCGCCTTGCAGCCGGAAGAGGAGC
TGGCGGATGCTCCCGGGGACATTAAGACCTTGGTGCGAAACATCAAAAgt
aagtgccacagtccctcactccttccctcccttcctccaccgtttccttc
ctctgtttctccctcgtcttgccctttctccaaacctgcctccctcgtct
ggtctgtgactgcgtctgtatttaccccctggctccggggtcggtacccc
cgacgacttatcccctttctccctcccgccctctccccgtttgtctagGG
GGCATAGAGTGCGAATTGATTGACCCGAGCGCCCACATTTTCGGCGATGA
AAGACTGTTGTGCGCGATTGTCTGCAACGTGCATTACGTGGCCCGCACCC
TGTCGGAACACCCCGATATCCGCCCATTTATTGACCGAAGGAAACTGTCC
GTCGTGGGCGCCTACTACGCTTTTAGTGGGGTGGTGTCGTTCTTTGACGA
CCAGGATGAGGGAGGAAGGATGGAGAGAGGGCGGGTGTTTGGGGGTGTGG
AGGGAAACGGATCCTTGTGCTTAAGTTGTTCCGGAACTTTGTCCGGAAAC
TCGAGTCCGATGGCGGGGGGAGGGAGCAAGGGATCCAGTCCGCCTCCGAG
CGTGCAGGATGGGGTTAATAAAAGCGTCTAG

protein sequence of NO01G01240.1

>NO01G01240.1-protein ID=NO01G01240.1-protein|Name=NO01G01240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MLTSIRSHLDDQEVKIQEQLFRFQGIKRAIDRICKNDEAYMDSPDIVKAQ
TTLEDRPELERKGETAAEALRLLKVGNAAFLRDEVVPVHRSDRHIGLHFA
QKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTVDALARASLLYAV
QHLQSPLVVVLGHEKCGAVTAALQPEEELADAPGDIKTLVRNIKRGIECE
LIDPSAHIFGDERLLCAIVCNVHYVARTLSEHPDIRPFIDRRKLSVVGAY
YAFSGVVSFFDDQDEGGRMERGRVFGGVEGNGSLCLSCSGTLSGNSSPMA
GGGSKGSSPPPSVQDGVNKSV*

Synonyms

The feature 'NO01G01240' has the following synonyms


Synonym
CA2

Publications


Year	Publication
2019	Wei L, Shen C, El Hajjami M, You W, Wang Q, Zhang P, Ji Y, Hu H, Hu Q, Poetsch A, Xu J. Knockdown of carbonate anhydrase elevates Nannochloropsis productivity at high CO. Metabolic engineering. 2019 07; 54:96-108.
2017	Wei L, Xin Y, Wang Q, Yang J, Hu H, Xu J. RNAi-based targeted gene knockdown in the model oleaginous microalgae Nannochloropsis oceanica. The Plant journal : for cell and molecular biology. 2017 Mar; 89(6):1236-1250.