NO01G01020, NO01G01020 (gene) Nannochloropsis oceanica

Overview
NameNO01G01020
Unique NameNO01G01020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2055
Alignment locationchr1:257213..259267 -

Link to JBrowse

Properties
Property NameValue
DescriptionNucleolar gtp-binding protein 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:257213..259267 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030378G_CP_dom
IPR024929NOG2
IPR012971NOG2_N_dom
IPR006073GTP_binding_domain
Homology
BLAST of NO01G01020 vs. NCBI_GenBank
Match: XP_008605607.1 (hypothetical protein SDRG_01834 [Saprolegnia diclina VS20] >EQC40763.1 hypothetical protein SDRG_01834 [Saprolegnia diclina VS20])

HSP 1 Score: 590.9 bits (1522), Expect = 5.100e-165
Identity = 290/477 (60.80%), Postives = 360/477 (75.47%), Query Frame = 0
Query:   14 SSDNPNRKASDVKYKGGNLRDRATINRLQMYRGGKPIRNKKGKIVGGVLMMRNKVGGQAI--TGATGRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAEFRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYD-TGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPK 488
            S+DNPNRK    + K  N+RD+ TINRL MYR   PIRN++GKIVGG LMM  + GG  +    A  R  PDRRWFGNTRV+ Q +LD+FR EM+ +AADP+SV+LR +K+PMGL+ D+ KV RM LL+TE+++ TFG+K TRKR KL                G   D  SL+ + +     Y+  G  D  +  E EF+ ++ HD+F+KGQS+RIWGELYKV+DCSDVVIQVLDARN+PGTR DH++KHLK NA+HKHLI ++NKCDLVP WV ++WV+ILS + PTLAFHAS+   FGKG+LINLLRQ+AKLH +KKQISVG++GYPNVGKSS+IN L+ K+VCKVAPIPGETKVWQYITLM+RI+LIDCPG+VYD   DDE   VLKGVVRAE+LP PTEF A IL  VK E++++ YGI EWKD   F+ ++A + GKL+  GEPD NNVAV +INDF RGKLP F+APP K
Sbjct:   19 SADNPNRKVPK-RQKAANMRDKGTINRLNMYRNSGPIRNREGKIVGGSLMMAGRQGGITMQNADAPSRIAPDRRWFGNTRVVGQKELDKFRNEMSVKAADPYSVVLRTRKLPMGLIQDSAKVTRMKLLETESFEETFGSKKTRKRAKL----------------GAVSDLESLVNKASERAESYETKG-VDRNIAVEVEFKDKKSHDVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRSDHIDKHLKTNAAHKHLIYVINKCDLVPNWVTKKWVQILSKTTPTLAFHASLNAPFGKGALINLLRQFAKLHPEKKQISVGIIGYPNVGKSSVINALRKKRVCKVAPIPGETKVWQYITLMRRIFLIDCPGVVYDGVNDDEVETVLKGVVRAEKLPQPTEFTAAILNRVKKEHLIKVYGITEWKDEWHFLDQLATKCGKLLPKGEPDHNNVAVQMINDFIRGKLPWFIAPPLK 477          
BLAST of NO01G01020 vs. NCBI_GenBank
Match: OQS07492.1 (nucleolar GTP-binding protein 2 [Thraustotheca clavata])

HSP 1 Score: 588.6 bits (1516), Expect = 2.500e-164
Identity = 290/477 (60.80%), Postives = 359/477 (75.26%), Query Frame = 0
Query:   14 SSDNPNRKASDVKYKGGNLRDRATINRLQMYRGGKPIRNKKGKIVGGVLMMRNKVGGQAI--TGATGRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAEFRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYD-TGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPK 488
            S+DNPNRK    + K  N+RD+ATINRL MYR   PIRNK+GK+VGG LMM  + GG A+    A  R  PDR+WFGNTRV+ Q +LD+FR EM  +AADP+SV+LR +K+PMGL+ D++KV RM LL+TE+++ TFGAK TRKR KL                G   D  SL+ +       Y+  G  D  +  E EF+ +  HD+F+KGQS+RIWGELYKV+DCSDVVIQVLDARN+PGTR +H+EKHLK NA+HKHLI ++NKCDLVP WV ++WV+ILS + PTLAFHAS+ + FGKG+LINLLRQ+AKLH +KKQISVG++GYPNVGKSS+IN L+ K+VCKVAPIPGETKVWQYITLM+RI+LIDCPG+VYD   DDE   VLKGV+RAE+LP PTEF   IL  VK E++V+ YGI EWKD   F+ ++A + GKL+  GEPD N VAV +INDF RGKLP F+APP K
Sbjct:  468 SADNPNRKVPK-RQKAANMRDKATINRLNMYRNSGPIRNKQGKVVGGSLMMAGRQGGIAMQNADAPSRIAPDRKWFGNTRVVGQKELDKFRNEMNVKAADPYSVVLRTRKLPMGLIQDSQKVTRMKLLETESFEETFGAKKTRKRAKL----------------GAVSDLESLVNKAAERAESYETKG-VDRNIAVEVEFKDKTSHDVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRSNHIEKHLKANAAHKHLIYVINKCDLVPNWVTKKWVQILSKTTPTLAFHASLNSPFGKGALINLLRQFAKLHPEKKQISVGLIGYPNVGKSSVINALRKKRVCKVAPIPGETKVWQYITLMRRIFLIDCPGVVYDGVNDDEVETVLKGVIRAEKLPQPTEFTLAILNRVKKEHLVKVYGISEWKDESHFLDQLAVKCGKLLPKGEPDHNTVAVQMINDFIRGKLPWFIAPPLK 926          
BLAST of NO01G01020 vs. NCBI_GenBank
Match: XP_008862842.1 (hypothetical protein H310_01505 [Aphanomyces invadans] >ETW09037.1 hypothetical protein H310_01505 [Aphanomyces invadans])

HSP 1 Score: 587.4 bits (1513), Expect = 5.700e-164
Identity = 292/477 (61.22%), Postives = 361/477 (75.68%), Query Frame = 0
Query:   14 SSDNPNRKASDVKYKGGNLRDRATINRLQMYRGGKPIRNKKGKIVGGVLMMRNKVGGQAITGAT--GRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAEFRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYD-TGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPK 488
            S+DNPNRK    K K  N+RD+ TINRL MYR   PIRNK+GKIVGG LMM  + GG  +  A+   R  PDRRWFGNTRV+ Q +LD+FR EM  +AADP+SV+LR +K+PM L+ D+ KV RM LL+TET++ TFG + TRKR KL+         GV+       D  +L+ R N    KY+  G      V E EF+    HD+F+KGQSRRIWGELYKV+DCSDVVIQVLDARN+PGTR +H+E+HL+ NASHKHL+ ++NKCDLVP WV ++WV+ILS + PTLAFHAS+ + FGKG+LINLLRQ+AKLHQ+KKQISVG++GYPNVGKSS+IN L+ K+VCKVAPIPGETKVWQYITLM+RI+LIDCPG+VYD   D E   VLKGVVRAE+LP P EFI PILE VK E++V+ YGI++W D   F+ ++A ++GKL+  GE D NNVAV +INDF RGKLP F+APP K
Sbjct:   19 SADNPNRKIPK-KQKAANMRDKGTINRLNMYRNSGPIRNKQGKIVGGSLMMAGRQGGVTMNDASAPSRIAPDRRWFGNTRVVGQKELDKFRNEMNVKAADPYSVVLRTRKLPMSLIQDSAKVTRMKLLETETFEETFGKQRTRKRAKLN---------GVS-------DLEALVSRANEQTDKYETKGVDRNIQVVE-EFKDATSHDVFNKGQSRRIWGELYKVLDCSDVVIQVLDARNVPGTRSEHIERHLRNNASHKHLVYVINKCDLVPNWVTKKWVQILSKTTPTLAFHASLNSPFGKGALINLLRQFAKLHQEKKQISVGIIGYPNVGKSSVINALRKKRVCKVAPIPGETKVWQYITLMRRIFLIDCPGVVYDGVNDSEVETVLKGVVRAEKLPQPAEFILPILERVKKEHVVKVYGIEDWTDENQFLDQLAIKSGKLLPKGEADHNNVAVQVINDFIRGKLPWFIAPPLK 477          
BLAST of NO01G01020 vs. NCBI_GenBank
Match: OQR85515.1 (nucleolar GTP-binding protein 2 [Achlya hypogyna])

HSP 1 Score: 586.6 bits (1511), Expect = 9.700e-164
Identity = 289/477 (60.59%), Postives = 359/477 (75.26%), Query Frame = 0
Query:   14 SSDNPNRKASDVKYKGGNLRDRATINRLQMYRGGKPIRNKKGKIVGGVLMMRNKVGGQAI--TGATGRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAEFRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYD-TGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPK 488
            S+DNPNRK    + K  N+RD+ATINRL MYR   PIRN++GK+VGG LMM  + GG  +    A  R  PDRRWFGNTRV+ Q +LD+FR EM+ +AADP+SV+LR +K+PMGL+ D+ KV RM LL+TE+++ TFG+K TRKR KL                G   D  +L+ + +     Y+  G  D  +  E EF+ +  HD+F+KGQS+RIWGELYKV+DCSDVVIQVLDARN+PGTR DH+EKHLK NA+HKHLI ++NKCDLVP WV ++WV+ILS + PTLAFHAS+ + FGKG+LINLLRQ+AKLH +KKQISVG++GYPNVGKSS+IN L+ K+VCKVAPIPGETKVWQYITLM+RI+LIDCPG+VYD   DDE   VLKGVVRAE+LP PTEF   IL  VK E++++ YGI EWKD   F+ ++A + GKL+  GEPD N VAV +INDF RGKLP FVAPP K
Sbjct:   19 SADNPNRKVPK-RQKAANMRDKATINRLNMYRNSGPIRNREGKVVGGSLMMAGRQGGVTMQNADAPSRIAPDRRWFGNTRVVGQKELDKFRNEMSVKAADPYSVVLRTRKLPMGLIQDSAKVTRMKLLETESFEDTFGSKKTRKRAKL----------------GAISDLEALVNKASERAESYETKG-VDRNIAVEVEFKDKTSHDVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRSDHIEKHLKANAAHKHLIYVINKCDLVPNWVTKKWVQILSKTTPTLAFHASLNSPFGKGALINLLRQFAKLHPEKKQISVGLIGYPNVGKSSVINALRKKRVCKVAPIPGETKVWQYITLMRRIFLIDCPGVVYDGVNDDEVETVLKGVVRAEKLPQPTEFTLAILNRVKKEHLIKVYGITEWKDEWHFLDQLALKCGKLLPKGEPDHNTVAVQMINDFIRGKLPWFVAPPLK 477          
BLAST of NO01G01020 vs. NCBI_GenBank
Match: CBN77992.1 (Ngp1, nucleolar GTPase [Ectocarpus siliculosus])

HSP 1 Score: 585.9 bits (1509), Expect = 1.600e-163
Identity = 296/480 (61.67%), Postives = 351/480 (73.12%), Query Frame = 0
Query:   10 SSSKSSDNPNRKASDVKYKGGNLRDRATINRLQMYRGGKPIRNKKGKIVGGVLMMRNKVGGQAITGATGRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAEFRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYDTGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPKEG 490
            S S SS NP+R    +K  GGNLRD+ATINRL MY+  K IR+KKGK+VGG  MM+N+ G QAIT  TGR  PDRRWFGNTRVI Q +LD+FREEM+TR+ DP+SV+LRRKK+PMGLL + +KV RMNLL+TE+Y         RKRPKL  GV                D ++LL                                                +V+DCSDVVIQVLDARN+PGTRC HLE+HLKKNASHKHLI ++NK DLVP WV ++WVK+LSA++PTLAFHASITNSFGKG+LINLLRQ+AKLH DKKQISVGVVGYPNVGKSSIINTLK KKVCKVAP+PGETKVWQYI LM+RI+++DCPG+VYD GDDE  IVLKGVVRAE+LPDPT+F+  IL  VK EY+ R YG+  W+DA DFMTK+A R+G+L+ GGEPD ++VAV+IIND+QRGKLP+FVAPP  EG
Sbjct:    3 SKSGSSANPHRSTDGLKANGGNLRDKATINRLNMYK-AKGIRDKKGKLVGGAYMMKNRSGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMSTRSTDPYSVVLRRKKLPMGLLQEPDKVSRMNLLETESYSDVLANGRRRKRPKLGGGV---------------NDLSTLLASA---------------------------------------------EVLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKKVCKVAPVPGETKVWQYIALMRRIFIVDCPGVVYDDGDDEIEIVLKGVVRAEKLPDPTDFVPAILSRVKEEYVRRLYGVAAWEDATDFMTKLAARSGRLLAGGEPDFHSVAVNIINDYQRGKLPYFVAPPLAEG 421          
BLAST of NO01G01020 vs. NCBI_GenBank
Match: XP_009821139.1 (hypothetical protein H257_00253 [Aphanomyces astaci] >ETV88739.1 hypothetical protein H257_00253 [Aphanomyces astaci])

HSP 1 Score: 575.9 bits (1483), Expect = 1.700e-160
Identity = 286/477 (59.96%), Postives = 358/477 (75.05%), Query Frame = 0
Query:   14 SSDNPNRKASDVKYKGGNLRDRATINRLQMYRGGKPIRNKKGKIVGGVLMMRNKVGGQAITG--ATGRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAEFRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYD-TGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPK 488
            SSDNPNRK    K K  N+RD+ TI RL MYR    IRNK+GKIVGG LMM  + GG  +    A+ R  PDRRWFGNTRV+ Q +LD+FR EM  +AADP+SV+LR +K+PM L+ D+ KV RM LL+TET++ TFG + +RKR KL               +GV GD  +L+ R +    KY+  G  D  +    EF+    HD+F+KGQSRRIWGELYKV+DCSDVVIQVLDARN+PGTR +H+E+HL+ NA+HKHL+ ++NKCDLVP WV ++WV+ILS + PTLAFHAS+ + FGKG+LINLLRQ+AKLHQ+KKQISVG++GYPNVGKSS+IN L+ K+VCKVAPIPGETKVWQYITLM+RI+LIDCPG+VYD   D E   VLKGVVRAE+LP P EFI PIL+ VK E++++ YGI +W D   F+ ++A ++GKL+  GE D NNVAV +INDF RGKLP F+APP K
Sbjct:   19 SSDNPNRKIPK-KQKAANMRDKGTIKRLNMYRNSGAIRNKEGKIVGGSLMMAGRQGGVTMNDPTASSRIAPDRRWFGNTRVVGQKELDKFRNEMHVKAADPYSVVLRTRKLPMSLIQDSAKVTRMKLLETETFEETFGKQRSRKRAKL---------------NGV-GDLEALMNRASDQADKYETKG-VDRNIEVVEEFKDATSHDVFNKGQSRRIWGELYKVLDCSDVVIQVLDARNVPGTRSEHIERHLRSNAAHKHLVYVINKCDLVPNWVTKKWVQILSKTTPTLAFHASLNSPFGKGALINLLRQFAKLHQEKKQISVGIIGYPNVGKSSVINALRKKRVCKVAPIPGETKVWQYITLMRRIFLIDCPGVVYDGVNDGEVETVLKGVVRAEKLPQPAEFIQPILDRVKKEHVIKVYGIPDWTDDNHFLDQLAIKSGKLLPKGEADHNNVAVQVINDFIRGKLPWFIAPPLK 477          
BLAST of NO01G01020 vs. NCBI_GenBank
Match: XP_002897112.1 (nucleolar GTP-binding protein 2 [Phytophthora infestans T30-4] >EEY65483.1 nucleolar GTP-binding protein 2 [Phytophthora infestans T30-4])

HSP 1 Score: 524.2 bits (1349), Expect = 5.900e-145
Identity = 264/476 (55.46%), Postives = 331/476 (69.54%), Query Frame = 0
Query:   10 SSSKSSDNPNRKASDVKYKGGNLRDRATINRLQMYRGGKPIRNKKGKIVGGVLMMRNKVGGQAITGATGRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAEFRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYDTGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPP 486
            ++  S+DNPNRKA   + K  N+RD++TI RL MYR   PIRNK GK+VGG LMM+NK GGQ IT A+GR QPDRRWFGNTRV+ Q +LD+FR EM+ + ADP+SV+LR +K+PMGLL ++EK  RM LL+TE+Y   F  K +RKR K++A                  DY SL+ R   +  KY+A G  D  +  E EF+ E  HD+F+KGQS+RIWGELYKV+DCSDVVIQVLDARN+PGTRC+H+EKH++KNASHKHLI ++NKCDLVP WV +RWV+ LS + PTLAFHAS+TN FGKG+LINLLRQ+AKLHQ+KKQISVG++GYPNVGKSS+IN L+ KKVCKVAPIP                                                 +FI  IL+ VK E++++ YGI+EW D  DF+ K+A + GKL++ GEPD NNVAV IIND+QRGKLP F+APP
Sbjct:    7 TTKASADNPNRKAPK-RQKAANMRDKSTIKRLNMYRNSGPIRNKAGKVVGGSLMMKNKAGGQEITSASGRVQPDRRWFGNTRVVGQKELDKFRNEMSLKTADPYSVVLRTRKLPMGLLQESEKTTRMKLLETESYDEVFDGKRSRKRAKIAA-----------------TDYTSLVSRAQENTEKYEAKG-PDRNIAVEQEFKDEVSHDVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIRKNASHKHLIFVINKCDLVPNWVTKRWVQKLSEATPTLAFHASMTNPFGKGALINLLRQFAKLHQEKKQISVGLIGYPNVGKSSVINALRKKKVCKVAPIP-------------------------------------------------DFILTILQRVKKEFIIKVYGIEEWNDEWDFLEKLANKCGKLLQKGEPDYNNVAVQIINDYQRGKLPWFIAPP 414          
BLAST of NO01G01020 vs. NCBI_GenBank
Match: PFX26515.1 (Nucleolar GTP-binding protein 2 [Stylophora pistillata])

HSP 1 Score: 521.9 bits (1343), Expect = 2.900e-144
Identity = 270/480 (56.25%), Postives = 333/480 (69.38%), Query Frame = 0
Query:   12 SKSSDNPNRKASDVKYKGGNLRDRATINRLQMYR-GGKPIRNKKGKIVGGVLMMRNKVGGQAITGATGRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAE-FRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYDTGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPKEG 490
            S SS NP+R        G N+RD+AT+NRL+MY+ GGK +RN+KGKIV       +   G+       R  P+R+WFGNTRVISQ  L  F++EM     DP+ V++R+ K+P+ LL D  +  R+++L TE++  TFG K+ RKRP L A                  D   L+E   V    Y      D  LV E +  RVE +  LF KGQS+RIW ELYKVID S+VVIQVLDAR+  GTR  H+E  +KK   HKHLI ++NKCDLVP WV +RWV +LSA +PTLAFHAS+TN FGKG+LINLLRQ+AKLH DKKQISVGV+GYPNVGKSSIINTL++KKVC VAPI GETKVWQY+TLM+RIYLIDCPG+VY +GD ET I+LKGVVR E + D    I  +LE VK EY+ +TY +  W D  DF+ +VA+RTGKL+KGGE D+N VA  I+NDFQRGKLP+FVAPP KEG
Sbjct:   17 SNSSMNPDRPKPPA---GSNMRDKATVNRLKMYKSGGKAVRNRKGKIVKPAPFQSSVASGE-----VARVAPNRKWFGNTRVISQNALQSFQDEMGKVLNDPYKVVMRQSKLPLSLLNDKVQSARVHILDTESFGTTFGPKAQRKRPNLKA-----------------ADMKGLMEAAQVSSETYNE--EKDMNLVREDDGERVEAKETLFTKGQSKRIWNELYKVIDSSEVVIQVLDARDPIGTRSTHIESFMKKEKQHKHLIFVLNKCDLVPTWVTQRWVTVLSADHPTLAFHASVTNPFGKGALINLLRQFAKLHTDKKQISVGVIGYPNVGKSSIINTLRAKKVCNVAPIAGETKVWQYVTLMRRIYLIDCPGVVYPSGDSETEIILKGVVRVENVKDAACHIPVVLERVKQEYIAKTYKVSSWNDPTDFLEQVAQRTGKLLKGGEADVNTVAKMILNDFQRGKLPYFVAPPSKEG 469          
BLAST of NO01G01020 vs. NCBI_GenBank
Match: XP_020613529.1 (nucleolar GTP-binding protein 2-like isoform X1 [Orbicella faveolata] >XP_020613531.1 nucleolar GTP-binding protein 2-like isoform X2 [Orbicella faveolata])

HSP 1 Score: 520.8 bits (1340), Expect = 6.500e-144
Identity = 268/480 (55.83%), Postives = 331/480 (68.96%), Query Frame = 0
Query:   12 SKSSDNPNRKASDVKYKGGNLRDRATINRLQMYR-GGKPIRNKKGKIVGGVLMMRNKVGGQAITGATGRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAE-FRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYDTGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPKEG 490
            S SS NP+R        G N+RD++T+NRL+MY+ GGK +RNKKGKIV       +   G+       R  P+R+WFGNTRVISQ  L  F++EM     DP+ V++R+ K+P+ LL D  +  R+++L TE ++ TFG K+ RKRP L A                  D    LE   +    Y      D  LV E +  +VE +  LF KGQS+RIW ELYKVID SDVVIQVLDAR+  GTR  H+E  +KK   HKHLI ++NKCDLVP WV +RWV +LSA YPTLAFHAS+TN FGKG+LINLLRQ++KLH DKKQISVGV+GYPNVGKSSIINTL++KKVC VAPI GETKVWQY+TLM+RIYLIDCPG+VY +GD ET I+LKGVVR E + D    I  +LE VK EY+ +TY +  W D  DF+ +VA+RTGKL+KGGE D+N V   I+NDFQRGKLP+FVAPP KEG
Sbjct:   17 SNSSMNPDRAKPAA---GSNMRDKSTVNRLKMYKSGGKAVRNKKGKIVKPAPFQSSVTSGE-----VARVAPNRKWFGNTRVISQNALQSFQDEMGKVLNDPYKVVIRQSKLPLSLLNDRAQSARVHILDTEGFETTFGPKAQRKRPNLKA-----------------ADMKGFLEAAQLSSEMYDE--EKDMNLVREDDGEKVEAKESLFTKGQSKRIWNELYKVIDSSDVVIQVLDARDPMGTRSSHIESFMKKEKQHKHLIFVLNKCDLVPTWVTQRWVTVLSADYPTLAFHASVTNPFGKGALINLLRQFSKLHTDKKQISVGVIGYPNVGKSSIINTLRAKKVCNVAPIAGETKVWQYVTLMRRIYLIDCPGVVYPSGDSETDIILKGVVRVENVKDAACHIPAVLERVKREYIAKTYKVSSWNDPTDFLEQVAQRTGKLLKGGEADVNTVGKMILNDFQRGKLPYFVAPPSKEG 469          
BLAST of NO01G01020 vs. NCBI_GenBank
Match: XP_020613532.1 (nucleolar GTP-binding protein 2-like isoform X3 [Orbicella faveolata])

HSP 1 Score: 520.8 bits (1340), Expect = 6.500e-144
Identity = 268/480 (55.83%), Postives = 331/480 (68.96%), Query Frame = 0
Query:   12 SKSSDNPNRKASDVKYKGGNLRDRATINRLQMYR-GGKPIRNKKGKIVGGVLMMRNKVGGQAITGATGRTQPDRRWFGNTRVISQVDLDRFREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGAKSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGHTDGALVEEAE-FRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPTLAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYDTGDDETAIVLKGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKRTGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPKEG 490
            S SS NP+R        G N+RD++T+NRL+MY+ GGK +RNKKGKIV       +   G+       R  P+R+WFGNTRVISQ  L  F++EM     DP+ V++R+ K+P+ LL D  +  R+++L TE ++ TFG K+ RKRP L A                  D    LE   +    Y      D  LV E +  +VE +  LF KGQS+RIW ELYKVID SDVVIQVLDAR+  GTR  H+E  +KK   HKHLI ++NKCDLVP WV +RWV +LSA YPTLAFHAS+TN FGKG+LINLLRQ++KLH DKKQISVGV+GYPNVGKSSIINTL++KKVC VAPI GETKVWQY+TLM+RIYLIDCPG+VY +GD ET I+LKGVVR E + D    I  +LE VK EY+ +TY +  W D  DF+ +VA+RTGKL+KGGE D+N V   I+NDFQRGKLP+FVAPP KEG
Sbjct:   17 SNSSMNPDRAKPAA---GSNMRDKSTVNRLKMYKSGGKAVRNKKGKIVKPAPFQSSVTSGE-----VARVAPNRKWFGNTRVISQNALQSFQDEMGKVLNDPYKVVIRQSKLPLSLLNDRAQSARVHILDTEGFETTFGPKAQRKRPNLKA-----------------ADMKGFLEAAQLSSEMYDE--EKDMNLVREDDGEKVEAKESLFTKGQSKRIWNELYKVIDSSDVVIQVLDARDPMGTRSSHIESFMKKEKQHKHLIFVLNKCDLVPTWVTQRWVTVLSADYPTLAFHASVTNPFGKGALINLLRQFSKLHTDKKQISVGVIGYPNVGKSSIINTLRAKKVCNVAPIAGETKVWQYVTLMRRIYLIDCPGVVYPSGDSETDIILKGVVRVENVKDAACHIPAVLERVKREYIAKTYKVSSWNDPTDFLEQVAQRTGKLLKGGEADVNTVGKMILNDFQRGKLPYFVAPPSKEG 469          
The following BLAST results are available for this feature:
BLAST of NO01G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008605607.15.100e-16560.80hypothetical protein SDRG_01834 [Saprolegnia dicli... [more]
OQS07492.12.500e-16460.80nucleolar GTP-binding protein 2 [Thraustotheca cla... [more]
XP_008862842.15.700e-16461.22hypothetical protein H310_01505 [Aphanomyces invad... [more]
OQR85515.19.700e-16460.59nucleolar GTP-binding protein 2 [Achlya hypogyna][more]
CBN77992.11.600e-16361.67Ngp1, nucleolar GTPase [Ectocarpus siliculosus][more]
XP_009821139.11.700e-16059.96hypothetical protein H257_00253 [Aphanomyces astac... [more]
XP_002897112.15.900e-14555.46nucleolar GTP-binding protein 2 [Phytophthora infe... [more]
PFX26515.12.900e-14456.25Nucleolar GTP-binding protein 2 [Stylophora pistil... [more]
XP_020613529.16.500e-14455.83nucleolar GTP-binding protein 2-like isoform X1 [O... [more]
XP_020613532.16.500e-14455.83nucleolar GTP-binding protein 2-like isoform X3 [O... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008271NSK008271Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01020.1NO01G01020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|229608gene_78Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100071g17gene1585Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01020.1NO01G01020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01020 ID=NO01G01020|Name=NO01G01020|organism=Nannochloropsis oceanica|type=gene|length=2055bp
ATGGGGAAATCAAAAGGGAGCGCGCTCAGCTCCTCCAAGAGCAGCGACAA
CCCTAACCGAAAGGCCTCGGATGTCAAGTACAAGGGTGGAAATCTCCGCG
ACCGGGCCACCATCAACCGCCTCCAGATGTACCGGGGCGGCAAGCCCATC
CGCAACAAGAAAGGCAAAATTGTTGGGGGGGTGCTTATGATGCGGAATAA
GGTCGGCGGACAAGCCATCACGGGCGCCACCGGGCGGACGCAGCCGGACC
GACGCTGGTTTGGTAACACCCGCGTGATTTCGCAGGTGGACTTGGACAGA
TTCCGGGAGGAGATGACGACGCGGGCCGCGGATCCTTTTAGTGTAATCTT
GCGACGCAAAAAGATCCCAATGGGCCTGTTAGTGGACACCGAAAAGGTGC
AACGCATGAATTTGTTGCAGACCGAGACATATCAGGCGACGTTCGGGGCC
AAGTCGACGCGGAAGCGACCCAAGCTCTCGGCAGGGGTGATGGAGGCGGC
CATGGGGGGTGTGGCAGGCGGGTCGGGCGTCGGAGGGGATTACGCTTCTT
TGCTTGAGCGCGTAAATGTCGACCAGGCCAAATACCAAGCGCCGGGGCAC
ACGGATGGGGCATTGGTCGAGGAGGCTGAATTTAGGGTGGAGCGGCGGCA
TGATTTATTCGACAAAGGCCAAAGTCGGAGGATTTGGGGGGAGCTGTACA
AGGTTATTGATTGCTCAGATGTCGTCATTCAAGTCTTGGACGCCCGCAAC
ATCCCTGGTACCCGTTGTGACCACTTGGAGAAGCATTTGAAGAAGAATGC
GAGTCATAAGCATTTGATTCTCATCGTCAACAAATGTGACCTGGTTCCTG
CGTGGGTCGTCCGTCGATGGGTGAAGATCCTGTCGGCCTCCTACCCTACC
CTTGCCTTCCACGCCTCCATCACCAACTCCTTCGGGAAAGGCAGCCTGAT
CAACCTCCTTCGACAATACGCTAAGCTCCACCAGGACAAGAAGCAGATCT
CCGTGGGTGTGGTGGGCTATCCCAACGTAGGGAAGTCGTCCATCATCAAC
ACATTGAAGAGTAAGAAGGTATGCAAAGTGGCCCCTATCCCGGGGGAGAC
CAAAGTTTGGCAGTACATCACCTTAATGAAGCGAATTTACCTGATCGACT
GTCCTGGCATAGTGTATGACACGGGCGATGATGAGACGGCCATCGTGCTC
AAGGGCGTGGTGCGCGCCGAGCGTCTGCCGGACCCGACGGAGTTTATTGC
TCCTATCTTGGAGCTGGTCAAGCCGGAATATATGGTGCGGACGTATGGAA
TCAAGGAGTGGAAGGATGCGCTAGATTTCATGACCAAGGTAGCAAAGAGG
ACGGGGAAGTTGGTGAAGGGGGGAGAACCTGATTTGAATAATGTGGCTGT
GTCGATTATCAATGATTTTCAACGTGGGAAACTACCTCATTTCGTGGCAC
CTCCGCCCAAGGAGGGGGAAGAGGAAGGAGATGAGGCGGGGGAGGAGGAC
TGGATAGAAGGGGGGTTGGTGGAGCTGGCTGCGGACGCGGCAGAGAAGGA
AGAGGAGGAGGATGACGGGGATGGGAATGAAGAGGAGAACGAAGAGGAGG
AGGAAGCGGAGGATGAGGAAGAAGAAGAAGAAGAAGTAGAAGTAGAAGAG
GAAGAAGAGGAGGAGGATGCATCTGAGGATGAGGAGGAGGAGGACAAGAA
GGAGGAGGGGGAGGAGGCCGAGAAGGCACAGGTGATTGTGGAAAAAGCTG
CGCAGCGCTCCAGCAAGCGAGGGGGAAGTCGGACTGCGGTCGCGCGTGCC
ATCAAGAAGCCGTCCGCTGCTCGCACCACCACCGCCAAGGTTGGAAGCTT
AAAGAAAGATTCCACGGCCACCATCAGCACCACCACTACCAGAGGTAAAA
TCATGAACAAGGGCAATCCAATTGCAGCAGTTAAAAAGAAGGCGGTTGCT
CGACAGCAGAAGATGCAAGAGCTGCAGCAGCAACAGCCGCAGCTGAAAAA
GAAGAGAGGATTGGAGGTGGCAGTGGAGGCTCCGGCTAGCTGGGATGACC
TATAG
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protein sequence of NO01G01020.1

>NO01G01020.1-protein ID=NO01G01020.1-protein|Name=NO01G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=685bp
MGKSKGSALSSSKSSDNPNRKASDVKYKGGNLRDRATINRLQMYRGGKPI
RNKKGKIVGGVLMMRNKVGGQAITGATGRTQPDRRWFGNTRVISQVDLDR
FREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGA
KSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGH
TDGALVEEAEFRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARN
IPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPT
LAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIIN
TLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYDTGDDETAIVL
KGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKR
TGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPKEGEEEGDEAGEED
WIEGGLVELAADAAEKEEEEDDGDGNEEENEEEEEAEDEEEEEEEVEVEE
EEEEEDASEDEEEEDKKEEGEEAEKAQVIVEKAAQRSSKRGGSRTAVARA
IKKPSAARTTTAKVGSLKKDSTATISTTTTRGKIMNKGNPIAAVKKKAVA
RQQKMQELQQQQPQLKKKRGLEVAVEAPASWDDL*
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Synonyms
Publications