jgi.p|Nanoce1779_2|229608, gene_78 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|229608
Unique Namegene_78
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:208836..211358 -

Link to JBrowse

Properties
Property NameValue
TranscriptId229694
ProteinId229608
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:208836..211358 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000810diacylglycerol diphosphate phosphatase activity
GO:0004787thiamine-pyrophosphatase activity
GO:00084138-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
GO:0008758UDP-2,3-diacylglucosamine hydrolase activity
GO:0008796bis(5'-nucleosyl)-tetraphosphatase activity
GO:0008828dATP pyrophosphohydrolase activity
GO:0016462pyrophosphatase activity
GO:0019176dihydroneopterin monophosphate phosphatase activity
GO:0019177dihydroneopterin triphosphate pyrophosphohydrolase activity
GO:0005525GTP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01020NO01G01020Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|229608mRNA_78-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|229608mRNA_78Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|229608

>mRNA_78-protein ID=mRNA_78-protein|Name=jgi.p|Nanoce1779_2|229608|organism=Nannochloropsis oceanica|type=polypeptide|length=491bp
MGKSKGSALSSSKSSDNPNRKASDVKYKGGNLRDRATINRLQMYRGGKPI
RNKKGKIVGGVLMMRNKVGGQAITGATGRTQPDRRWFGNTRVISQVDLDR
FREEMTTRAADPFSVILRRKKIPMGLLVDTEKVQRMNLLQTETYQATFGA
KSTRKRPKLSAGVMEAAMGGVAGGSGVGGDYASLLERVNVDQAKYQAPGH
TDGALVEEAEFRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARN
IPGTRCDHLEKHLKKNASHKHLILIVNKCDLVPAWVVRRWVKILSASYPT
LAFHASITNSFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIIN
TLKSKKVCKVAPIPGETKVWQYITLMKRIYLIDCPGIVYDTGDDETAIVL
KGVVRAERLPDPTEFIAPILELVKPEYMVRTYGIKEWKDALDFMTKVAKR
TGKLVKGGEPDLNNVAVSIINDFQRGKLPHFVAPPPKEGE*
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Synonyms
Publications