NO01G00980, NO01G00980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00980 vs. NCBI_GenBank
Match: XP_020597097.1 (protein OS-9 homolog isoform X3 [Phalaenopsis equestris]) HSP 1 Score: 115.9 bits (289), Expect = 3.700e-22 Identity = 60/161 (37.27%), Postives = 83/161 (51.55%), Query Frame = 0 Query: 326 LLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEPV-PENFKEEEHVVKIERDGEEGGLKRTFFEREYPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQCKRRP 486 L+E + C+ RHEG+WSYEFC++ +RQ H + D K E+++G F+PV NF + + + +D + + Y GT CDLT R T + FVC E P V SIKE +C Y I P LC+HP F +ERP H + C P Sbjct: 112 LIEGIKEKCIYRHEGWWSYEFCHQKHVRQLH---LED------DKPVQEFLMGVFDPVATANFNQNQSDATVLKDPRSKDASQRYHAHVYNNGTLCDLTNQLRETEIRFVCSE-PSVVISSIKEISTCKYVVTIQCPMLCKHPMFHQERPIWHTIHCNEDP 262
BLAST of NO01G00980 vs. NCBI_GenBank
Match: XP_020597096.1 (protein OS-9 homolog isoform X2 [Phalaenopsis equestris]) HSP 1 Score: 115.9 bits (289), Expect = 3.700e-22 Identity = 60/161 (37.27%), Postives = 83/161 (51.55%), Query Frame = 0 Query: 326 LLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEPV-PENFKEEEHVVKIERDGEEGGLKRTFFEREYPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQCKRRP 486 L+E + C+ RHEG+WSYEFC++ +RQ H + D K E+++G F+PV NF + + + +D + + Y GT CDLT R T + FVC E P V SIKE +C Y I P LC+HP F +ERP H + C P Sbjct: 115 LIEGIKEKCIYRHEGWWSYEFCHQKHVRQLH---LED------DKPVQEFLMGVFDPVATANFNQNQSDATVLKDPRSKDASQRYHAHVYNNGTLCDLTNQLRETEIRFVCSE-PSVVISSIKEISTCKYVVTIQCPMLCKHPMFHQERPIWHTIHCNEDP 265
BLAST of NO01G00980 vs. NCBI_GenBank
Match: XP_011626391.2 (protein OS-9 homolog isoform X1 [Amborella trichopoda]) HSP 1 Score: 115.5 bits (288), Expect = 4.900e-22 Identity = 63/172 (36.63%), Postives = 84/172 (48.84%), Query Frame = 0 Query: 326 LLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEP-VPENFKEEEHVVKIERDGEEGGLKRTFFERE-----------YPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQCKRRP 486 L++ L C +RHEG+W YEFCY +RQ H D +KI E+++G ++P V F V +D + +++ E Y GT CDLT + R T V F+C E P SIKE +C Y I P LCRHP FR+ERPA H + C P Sbjct: 155 LIDELKDQCFERHEGWWVYEFCYHKKLRQVH---WED------NKIVQEFVMGTYDPEVTAAFNSNHSGVSTLKDPRSKDAAQRYWKAENLYDSRYHAHLYTNGTVCDLTNEPRETEVRFMCSESPRVSITSIKEISTCKYAVTIQCPMLCRHPMFREERPAWHTINCNEIP 317
BLAST of NO01G00980 vs. NCBI_GenBank
Match: XP_011626392.2 (protein OS-9 homolog isoform X2 [Amborella trichopoda]) HSP 1 Score: 115.5 bits (288), Expect = 4.900e-22 Identity = 63/172 (36.63%), Postives = 84/172 (48.84%), Query Frame = 0 Query: 326 LLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEP-VPENFKEEEHVVKIERDGEEGGLKRTFFERE-----------YPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQCKRRP 486 L++ L C +RHEG+W YEFCY +RQ H D +KI E+++G ++P V F V +D + +++ E Y GT CDLT + R T V F+C E P SIKE +C Y I P LCRHP FR+ERPA H + C P Sbjct: 154 LIDELKDQCFERHEGWWVYEFCYHKKLRQVH---WED------NKIVQEFVMGTYDPEVTAAFNSNHSGVSTLKDPRSKDAAQRYWKAENLYDSRYHAHLYTNGTVCDLTNEPRETEVRFMCSESPRVSITSIKEISTCKYAVTIQCPMLCRHPMFREERPAWHTINCNEIP 316
BLAST of NO01G00980 vs. NCBI_GenBank
Match: XP_010687838.1 (PREDICTED: protein OS-9 homolog [Beta vulgaris subsp. vulgaris] >KMT02715.1 hypothetical protein BVRB_8g193040 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 115.2 bits (287), Expect = 6.300e-22 Identity = 57/157 (36.31%), Postives = 83/157 (52.87%), Query Frame = 0 Query: 326 LLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEP-VPENFKEEEHVVKIERDGEEGGLKRTFFEREYPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQC 482 LLE L +CL R +G+W+YEFC+K +RQ H + D KI E+++G ++P + + + + + I +D + + +Y GT CDLT R T V FVC EG + SI E +C Y + TP LC HP F +ERP H + C Sbjct: 116 LLEVLDEHCLLRQDGWWTYEFCFKRTLRQLH---LED------EKIAQEFVLGVYDPEATDAYHQNQSDISILKDPHSKDASQRYHAHQYTNGTVCDLTNQHRETEVRFVCSEGKTTI-TSITELSTCKYALTVQTPMLCAHPLFHEERPVWHAIHC 262
BLAST of NO01G00980 vs. NCBI_GenBank
Match: XP_005647390.1 (hypothetical protein COCSUDRAFT_24068, partial [Coccomyxa subellipsoidea C-169] >EIE22846.1 hypothetical protein COCSUDRAFT_24068, partial [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 114.0 bits (284), Expect = 1.400e-21 Identity = 66/217 (30.41%), Postives = 104/217 (47.93%), Query Frame = 0 Query: 268 RIGGVNPAPMAVAQLTSMKEMSICNYSMIVCSPLLCDSDTLYSLVSLT---GGAANSQALRLLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEPVPENFKEEEHVVKIERDGEEGGLKRTFFEREYPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQC 482 R G PAP A++ +MK+ +S + D D + SL G A LL L + CL R + +W+YE CYK +RQ+H + + K+ +EY +G + +E+ + ++ D G+ + ++ Y GG CD+TG+ R T V FVC E + ++E +C Y+ STP+LC HP+FR + H V C Sbjct: 64 RGGSERPAP-GWARVLAMKDKHGRKFSCRIPEVDSTDGDDTGNADSLAIAGGAAVQKSPSELLSALDTLCLYRIDDWWTYELCYKRHVRQFH---------KEIDKVVAEYTLGEYS------EEDSDMDEVHEDSSVAGVSSKYIKQVYKGGEPCDITGEPRETEVRFVCSEASKEGITGMRETATCQYRLTFSTPKLCTHPAFRAPQAPVHHVLC 264
BLAST of NO01G00980 vs. NCBI_GenBank
Match: XP_020109992.1 (protein OS-9 homolog isoform X2 [Ananas comosus] >OAY62638.1 hypothetical protein ACMD2_07583 [Ananas comosus]) HSP 1 Score: 113.2 bits (282), Expect = 2.400e-21 Identity = 60/163 (36.81%), Postives = 88/163 (53.99%), Query Frame = 0 Query: 326 LLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEP---VPENFKEEEHVVKIERDGEEGGLKRTFFEREYPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQCKRRP 486 LL+ L C RHEG+WSYEFCY IRQ H + D +++ E+++G F+P N K+ + + +D + + +Y GT CDLT R T V FVC E P+ + SIKE SC Y + +P LC+HP +++ERP T ++ C + P Sbjct: 121 LLDVLKDQCFYRHEGWWSYEFCYHRKIRQIH---LED------NEVVQEFVLGEFDPDGTAAHNQKDSDAFML--KDPRSRDASQRYHAHQYTNGTTCDLTDQPRETEVRFVCAESPV-IISSIKEISSCKYVVTVQSPMLCKHPMYQQERP-TRLIHCNQLP 270
BLAST of NO01G00980 vs. NCBI_GenBank
Match: XP_020109991.1 (protein OS-9 homolog isoform X1 [Ananas comosus]) HSP 1 Score: 113.2 bits (282), Expect = 2.400e-21 Identity = 60/163 (36.81%), Postives = 88/163 (53.99%), Query Frame = 0 Query: 326 LLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEP---VPENFKEEEHVVKIERDGEEGGLKRTFFEREYPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQCKRRP 486 LL+ L C RHEG+WSYEFCY IRQ H + D +++ E+++G F+P N K+ + + +D + + +Y GT CDLT R T V FVC E P+ + SIKE SC Y + +P LC+HP +++ERP T ++ C + P Sbjct: 124 LLDVLKDQCFYRHEGWWSYEFCYHRKIRQIH---LED------NEVVQEFVLGEFDPDGTAAHNQKDSDAFML--KDPRSRDASQRYHAHQYTNGTTCDLTDQPRETEVRFVCAESPV-IISSIKEISSCKYVVTVQSPMLCKHPMYQQERP-TRLIHCNQLP 273
BLAST of NO01G00980 vs. NCBI_GenBank
Match: NP_001242361.1 (uncharacterized protein LOC100792441 precursor [Glycine max] >ACU20144.1 unknown [Glycine max]) HSP 1 Score: 112.5 bits (280), Expect = 4.100e-21 Identity = 62/177 (35.03%), Postives = 87/177 (49.15%), Query Frame = 0 Query: 326 LLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEP-VPENFKEEEHVVKIERDGEEGGLKRTFFEREYPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQCKRRPVQKLLGLQEKEGEEDE 502 LLE L C R EG+WSYEFCY+ +RQ H + D K+ E+++GA++P F E + +D + + +Y GT CDLT R T V FVC E P + SI E +C Y + P LC+HP F++ERP H++ C P + +E E E Sbjct: 112 LLEVLKGPCFVRQEGWWSYEFCYQKKLRQLH---LED------DKVVQEFVLGAYDPEATAAFNENLSDISTLKDPRSKDASQRYHAHQYTNGTVCDLTNKPRETEVRFVCSE-PRPMISSITEISTCKYALTVQCPSLCKHPLFQEERPVWHIIDCNVLPKDHVGAKVRQENENTE 278
BLAST of NO01G00980 vs. NCBI_GenBank
Match: KHN48127.1 (Protein OS-9 [Glycine soja]) HSP 1 Score: 112.5 bits (280), Expect = 4.100e-21 Identity = 62/177 (35.03%), Postives = 87/177 (49.15%), Query Frame = 0 Query: 326 LLEPLASYCLKRHEGFWSYEFCYKGAIRQYHTVAMRDSTGQVMSKIESEYIIGAFEP-VPENFKEEEHVVKIERDGEEGGLKRTFFEREYPGGTECDLTGDKRATTVEFVCGEGPLDVFESIKEDRSCHYKAVISTPRLCRHPSFRKERPATHVVQCKRRPVQKLLGLQEKEGEEDE 502 LLE L C R EG+WSYEFCY+ +RQ H + D K+ E+++GA++P F E + +D + + +Y GT CDLT R T V FVC E P + SI E +C Y + P LC+HP F++ERP H++ C P + +E E E Sbjct: 112 LLEVLKGPCFVRQEGWWSYEFCYQKKLRQLH---LED------DKVVQEFVLGAYDPEATAAFNENLSDISTLKDPRSKDASQRYHAHQYTNGTVCDLTNKPRETEVRFVCSE-PRPMISSITEISTCKYALTVQCPSLCKHPLFQEERPVWHIIDCNVLPKDHVGAKVRQENENTE 278 The following BLAST results are available for this feature:
BLAST of NO01G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00980 ID=NO01G00980|Name=NO01G00980|organism=Nannochloropsis oceanica|type=gene|length=1925bpback to top protein sequence of NO01G00980.1 >NO01G00980.1-protein ID=NO01G00980.1-protein|Name=NO01G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=527bpback to top Synonyms
Publications
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