NO01G00850, NO01G00850 (gene) Nannochloropsis oceanica

Overview
NameNO01G00850
Unique NameNO01G00850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4401
Alignment locationchr1:217181..221581 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:217181..221581 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO01G00850 vs. NCBI_GenBank
Match: EWM29014.1 (hypothetical protein Naga_100443g2 [Nannochloropsis gaditana])

HSP 1 Score: 473.8 bits (1218), Expect = 2.000e-129
Identity = 336/565 (59.47%), Postives = 399/565 (70.62%), Query Frame = 0
Query:  864 SLTDAQRAEKMEEIKKWENEFRKAKKGFAEIQEVVMELRQAREKEAAELNDLKRRWLQSQTRFANYHRLKEESLLPGVKDDLDVI------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSLILSTPRLPSRTVPDLLEVTHFVRQLAKPLSVEAFPLIHLLRALTEGDEITEGVEGEGRREGNSCVLMREFSEVPAPL-PPFSTRGGPK-SLDVGAPPPFFLSRCFLSFVRLIFNRNVATGEAREGEEGGPRSGRGEPKESSIYLWNQTRFCWAELLNPLTLPEIIRRYLVARIRERK---ACLGGGEEGGRREGGKDVLEFFETEGGFCPFGEGYVESDNLVESAVEALRCMSLERLGGEHSLALLRVLMEEVQDLKGVQEWIQGKVERLLLLTEAKNEVEKELRKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAIGVAAGTGGDYTETPQIQALNLKIQKLSIQLDKAKEELEEFEREFARVRTLPLGEDRYRNQYWYFENEPRLYVHLRSG 1418
            +LT A+  E+ EEIK+W  E R+AKKGF E+QE V+ELRQAREKE AE  ++KRRW QSQTRF NYHR K E LL  VKDDL+ +      XXXXXXXXXXXXXXXXXXXXXXXXX              PPSL+L++P LPSR +PDL+EVTHFVR+LAKPL ++ FPL+HL  ALT+G     G E +G  +G+   L+ E+  VP+ L PP S RGG K     G P   FLS  FLSF+RLIFNR+V TGEA+EGEEGGPRSGRGEPKES+ +LWN TRF WAELLNPLTLPEI RR+LVA+ RE+K    C G  EE       K ++E FE +GG+CPFGE ++ +D +V +A EALRC+ LE LG E++L+LLR LMEEVQD+K VQ++IQ K ERLL L+E KNEVEKE+RK N                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             V+  TG     +P++Q LN KIQK+S QL  A+EEL  +EREFAR R+LPLGEDRYRNQYWY+E +PRLYVHLRSG
Sbjct:  738 ALTPAELKEQQEEIKQWTGELRRAKKGFQEMQEKVLELRQAREKEGAEWTEVKRRWQQSQTRFENYHRHKSELLLLSVKDDLETLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAQASVGPVLNLPPPSLLLTSPSLPSRAIPDLMEVTHFVRELAKPLGLQPFPLLHLHTALTQGAG-EGGAEEKGAGKGSLRGLVEEYRAVPSTLPPPGSGRGGGKVGKAEGRPSRHFLSHFFLSFLRLIFNRHVVTGEAKEGEEGGPRSGRGEPKESAAFLWNLTRFTWAELLNPLTLPEIARRFLVAKWREKKNMLQCPGALEE-------KVLVELFEVDGGYCPFGESFLGNDAMVVAATEALRCLQLESLGAEYTLSLLRALMEEVQDVKAVQDFIQTKAERLLNLSETKNEVEKEMRKLNREMKKLVMAAKAMGVEGVGRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGL-------NGKDVSTTTGSTVLGSPEVQHLNSKIQKVSGQLKAAREELGLYEREFARARSLPLGEDRYRNQYWYYEEDPRLYVHLRSG 1287          
The following BLAST results are available for this feature:
BLAST of NO01G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29014.12.000e-12959.47hypothetical protein Naga_100443g2 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008293NSK008293Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00850.1NO01G00850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100443g2gene1600Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00850.1NO01G00850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00850 ID=NO01G00850|Name=NO01G00850|organism=Nannochloropsis oceanica|type=gene|length=4401bp
ATGGAGGACGTGGAGGCCCCCTCAGCGACGTCACCAACGGCCACGGGCGT
GGGGTCTGCAGACAGTTTATCAGCCACCACCTTCAATGTCGGTGACATGG
TCATGATTCAAGAGGCGGACGGGCAGCTTCAGGAACGGCAGGTGGTGGAG
GTTTCGTCCAAAACAGTCAACCGGAGGAAGCGCCTTTACTACAAACTGCA
ATCTGCGGACACCGTGTCGAGGAAACGAGGGAGAGTGATGGAGGAATGGC
ATGAGGGGGAAAATGTCCGACGGCATGACCCTCAGGCATTGGCAGTATCG
GCCGCGAAGTTGTCGGGGATGCGGAGGAGGCGAGGAACGGGAGTGGAAAA
GGAGGAGGCGGGGGGGGAAGGAAAGGAAGACAGGAAATCTTCTCCTGGGC
GGGTGACTCGAAGTGGGGGCAGCGGGGAAGGAGGAGGAGGAGGGGGGGAT
GAAGTGATGAGTGACCCACTTTTAATGTGGGAGTACGTCAAGGAGGCACT
GAGTGATCCGAGCATGAAGGGGGGAAACCTTGCTGACATCCAAGCGTACA
TCCAGGCCAAGCACGGGCACAGCGCGCGTCAGACACGTAAGTGTCTCAAT
ACGGCCATTGAGAAAGCCGTGAGCGATAAACGGATCGAGAAGCTTGGGCG
ACATTATCGCATTAGGGTTGGTAATGAATTTAAACCGTCGGCTTTTAAAG
TGGCGACGAGCGAGGCCATCAGGGGCGTGGAAGGAGCGTTGAAGATGAAG
GAGGTAGAGGAGCAGCAGCATCAACAACAAGACCAACAGCAGCAGCAGTA
TGACGAAAAGTCTCATCAGCAGCACTTGCAGGTGCAGCGGATGGATCATG
TGCCGGAAGGGAGGCCAGGAAAGATTATGGGTGGGGCTGATCCCCTTGCA
CCGGAAGAAGGAGGGGCGATAGATATGAGCAGGAGCACGAGCACCAGCGG
GGGCACAGCTGCAGCAGATACTGCTGGTACCTCGTCCTCTTCAACAACTG
TTGCTCCTTTTGACGCCCATCCTCCTCCGCCAGCCACTGACCCTTCATCG
GCTGCTGCAGAAGCAGGTGTCGCCGCGGCCAATGGAGCAGGGGCAGCAGC
TGCTTATGGGCATTACTCTCCGTCTCAGTACGCCGCGCATTATGCAGCAA
TCGCTCAACACACACAGCAACAGCACCAACAGCAGCACCAACAGCAACAG
CACCAACAGCAGCATTACCATTATCCGGGCTATGGCACCTACTCCTATCC
GTCCCCCTATGCCTCCTATCCGTACTCCACCGCCGCCGCCCCCTCAGGCA
CCGACCCAGGAGCAGGCGCTGGAGCAGCAGCAGCAGCAGCCGCATCAGCT
ACTGCGTATGGTTATCATCCATCGTACGCTCATCCTGCTTACGGGGGGTT
CGCGGGAAGCTACCCCGGCGGCAGCTACGTGCACCCTGCCTATGGATACA
ATGCCGGGTACTCACCCTACACCACCTCGGCAATCTCAGCAGAAGCATAC
AGCAACTACTACTACCAGCAGCAGCAACAGCAGCAACAGGCTGCTGCTGC
CGCCGCCGCAGCAGCAGCTTCAGCAACAACAACGCGTGAGCAGCAGTACA
AGCAGTCGGCAGGAGACAGGCGTCAGCAGCAGGAGTCTTTTTCGAGCTTG
ACAGCCCCCTCTCCTCCTCATCTGACCGTACCAGCCTCTTCCCGTGCTGC
GTCGTCAGAAGAGAAAGGAAGAGGAGGTGAAGGAGGATGTGGTGATATTC
AAACGGGCAGTCCAAGGGGGGGAGCGATGACTAGTCTGGCTGCTGCATTG
GGGGAGGGCAGCGTCGAGGAAATGGATGCTCGAGGGAGGGAAGGAGGGAA
AGGCAGGGATAATCGGTCGCTGGAGCTGAAGATGTTTGATGGGGCGAATG
TGGGGGCCTTAAATCAGTTGGCGAGAGAGAATGAGGCGAGGCTTGCAAAG
AGAAGGGAGAGGGAGAAGGTGCAGCGGCAGGAGAAGAAGGCCAAGCAAAA
GAAGGCTATTCAGTCCTCGGTCATGTCGGCGGCGGCGATAGGTGCATTGA
GAGGAGGGACAGAGGCAGAGGAGGAGGAGGAGCAGCAGCAGCAGCAGAGG
AAGGAAGGGGAAGGGGAGGAAGGATGGGATGGCACCTCATCGTCGGTGGC
GCTGCCTGTCCCCCCATTTATTCCGGGTCGGCTTGTCTCGACTGAGGAGG
CGTGGGAGGCGGAGGAGAAGAGGCAATCCGTAGTGCGTGACGATTCGAAC
CTCTCTGGAGACAAGGGGAGGGTGGAGCAGGAGCCGAGGAAGCAGGAGAG
GAAGGAGGCGAAGGCGAGATATGGGGGGGGGCACAGGCAATCGACCGAGG
AGGGGGAGAGGGATCCCGAGTCGAAGAAGAGGAAAGCTGTCACGGGTGTT
GCTGCTGGAGCGATGGTGACGGATGAGGCAAGTACAGCGGTGCTAGGCAT
TGGCACGGATGAGGGGTCAGGAGGGGGAGGAGGGAAGAAACGGTCGACCA
CGCCAACGGCTCTGTTGGTATCCTCCCCTCGCTCTGCCAGCGGGGGGGGA
GGGAAGAAAAAGCCTCTTATTTCCTCGGAGGAGAAGATGTCATTGACCGA
TGCTCAGCGCGCGGAAAAGATGGAGGAGATCAAGAAGTGGGAAAACGAAT
TCCGCAAGGCAAAGAAGGGGTTTGCTGAGATACAGGAGGTGGTGATGGAA
TTGAGGCAAGCGAGGGAGAAAGAGGCGGCGGAATTGAATGATCTAAAACG
ACGGTGGTTGCAGAGTCAGACGCGGTTCGCCAACTACCACAGACTGAAAG
AGGAGTCTCTTCTACCGGGCGTAAAGGACGATTTGGATGTGATCGTCGCC
GAGGCACGCAAGAAAAAGGGCCAAGCAGCAGCAGTAGCAGGTGGCAGTGG
TGGTGGTGGTGGTGGACTCCGTGTGGCTTCTGCGGCGCCTGGGGGACTCT
TATCCGTTACCCCCCCTTCCCTCATTTTATCAACGCCTCGGTTGCCCTCC
CGCACCGTCCCGGACCTGTTGGAAGTGACCCATTTCGTGCGCCAGCTGGC
CAAGCCGCTCTCCGTCGAAGCTTTTCCTCTCATCCACCTCCTTCGGGCCT
TGACGGAAGGTGACGAAATTACGGAGGGCGTGGAAGGGGAGGGAAGGAGG
GAAGGCAATAGCTGTGTGCTGATGCGTGAGTTCAGTGAGGTACCTGCTCC
ACTGCCCCCCTTCTCTACGCGTGGGGGGCCAAAGAGTTTGGACGTAGGCG
CGCCTCCTCCCTTCTTCCTCTCTCGGTGTTTCTTGTCCTTTGTCCGCCTT
ATCTTCAATCGGAATGTGGCTACGGGCGAGGCGAGGGAGGGGGAGGAAGG
GGGGCCGCGGTCAGGGAGGGGGGAACCCAAGGAAAGTTCGATTTATCTAT
GGAATCAGACCCGCTTCTGTTGGGCTGAGTTACTCAACCCCTTAACCTTA
CCGGAGATTATTCGACGGTATCTAGTGGCGCGAATCAGAGAGCGGAAGGC
GTGTTTGGGGGGGGGGGAGGAGGGGGGAAGGAGGGAGGGAGGGAAGGATG
TCCTCGAGTTTTTTGAGACAGAGGGCGGGTTTTGCCCGTTTGGCGAGGGG
TATGTGGAGAGTGATAATTTGGTGGAGTCGGCGGTGGAGGCGCTGAGGTG
CATGAGCCTTGAACGGTTAGGGGGCGAGCACAGTCTGGCTTTGCTGCGAG
TACTGATGGAAGAGGTGCAAGACCTGAAGGGGGTTCAGGAGTGGATACAA
GGGAAGGTAGAGCGGCTATTGCTTCTGACCGAGGCCAAGAATGAGGTGGA
GAAGGAGTTGAGGAAGGCGAATCGGGAGCAGAAGAAGGTCGTGACGGCGG
CCAAGCTGATCATGGTGGAGGATCAGCAACAAGCGGTGAAAACCGCAGCA
ACTGCTGCAACCGCTGATGCTACTACTGAAGGAGGGGAGGAGAAAGATTC
TGCTTCTTCTGCAGCTCCAGCTGCTTCCTCCTTAACCGTTACAGACGAAG
ATAACGACTCGGGTGCGATTGGTGTCGCCGCTGGGACGGGTGGGGACTAC
ACAGAAACTCCCCAAATTCAGGCTTTAAATTTAAAAATTCAAAAATTGAG
CATTCAACTGGACAAGGCCAAGGAGGAGTTGGAGGAGTTTGAGAGAGAAT
TTGCTCGAGTGAGGACATTGCCATTGGGGGAGGATAGATATCGAAATCAA
TACTGGTACTTCGAAAACGAGCCGCGACTGTACGTGCATTTGCGGTCGGG
AGGAGGGGGAGGAGAGGGAGGGGGGAGGGAGGGGTGGTTGGGGGAGGGAC
GGGGTTGGTGCTGCCATTCCGGTCGGGGAAAATCTTGGAGGCGCCGCCCT
CGCGGCCGAGGGGAGGGGAATGGGGAATCTATACGACGGAGGAGGGGGTG
A
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protein sequence of NO01G00850.1

>NO01G00850.1-protein ID=NO01G00850.1-protein|Name=NO01G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1467bp
MEDVEAPSATSPTATGVGSADSLSATTFNVGDMVMIQEADGQLQERQVVE
VSSKTVNRRKRLYYKLQSADTVSRKRGRVMEEWHEGENVRRHDPQALAVS
AAKLSGMRRRRGTGVEKEEAGGEGKEDRKSSPGRVTRSGGSGEGGGGGGD
EVMSDPLLMWEYVKEALSDPSMKGGNLADIQAYIQAKHGHSARQTRKCLN
TAIEKAVSDKRIEKLGRHYRIRVGNEFKPSAFKVATSEAIRGVEGALKMK
EVEEQQHQQQDQQQQQYDEKSHQQHLQVQRMDHVPEGRPGKIMGGADPLA
PEEGGAIDMSRSTSTSGGTAAADTAGTSSSSTTVAPFDAHPPPPATDPSS
AAAEAGVAAANGAGAAAAYGHYSPSQYAAHYAAIAQHTQQQHQQQHQQQQ
HQQQHYHYPGYGTYSYPSPYASYPYSTAAAPSGTDPGAGAGAAAAAAASA
TAYGYHPSYAHPAYGGFAGSYPGGSYVHPAYGYNAGYSPYTTSAISAEAY
SNYYYQQQQQQQQAAAAAAAAAASATTTREQQYKQSAGDRRQQQESFSSL
TAPSPPHLTVPASSRAASSEEKGRGGEGGCGDIQTGSPRGGAMTSLAAAL
GEGSVEEMDARGREGGKGRDNRSLELKMFDGANVGALNQLARENEARLAK
RREREKVQRQEKKAKQKKAIQSSVMSAAAIGALRGGTEAEEEEEQQQQQR
KEGEGEEGWDGTSSSVALPVPPFIPGRLVSTEEAWEAEEKRQSVVRDDSN
LSGDKGRVEQEPRKQERKEAKARYGGGHRQSTEEGERDPESKKRKAVTGV
AAGAMVTDEASTAVLGIGTDEGSGGGGGKKRSTTPTALLVSSPRSASGGG
GKKKPLISSEEKMSLTDAQRAEKMEEIKKWENEFRKAKKGFAEIQEVVME
LRQAREKEAAELNDLKRRWLQSQTRFANYHRLKEESLLPGVKDDLDVIVA
EARKKKGQAAAVAGGSGGGGGGLRVASAAPGGLLSVTPPSLILSTPRLPS
RTVPDLLEVTHFVRQLAKPLSVEAFPLIHLLRALTEGDEITEGVEGEGRR
EGNSCVLMREFSEVPAPLPPFSTRGGPKSLDVGAPPPFFLSRCFLSFVRL
IFNRNVATGEAREGEEGGPRSGRGEPKESSIYLWNQTRFCWAELLNPLTL
PEIIRRYLVARIRERKACLGGGEEGGRREGGKDVLEFFETEGGFCPFGEG
YVESDNLVESAVEALRCMSLERLGGEHSLALLRVLMEEVQDLKGVQEWIQ
GKVERLLLLTEAKNEVEKELRKANREQKKVVTAAKLIMVEDQQQAVKTAA
TAATADATTEGGEEKDSASSAAPAASSLTVTDEDNDSGAIGVAAGTGGDY
TETPQIQALNLKIQKLSIQLDKAKEELEEFEREFARVRTLPLGEDRYRNQ
YWYFENEPRLYVHLRSGGGGGEGGGREGWLGEGRGWCCHSGRGKSWRRRP
RGRGEGNGESIRRRRG*
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Synonyms
Publications