Naga_100443g2, gene1600 (gene) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	Naga_100443g2
Unique Name	gene1600
Type	gene
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002457.1:1192273..1197334 -

Link to JBrowse

Properties


Property Name	Value
Locus tag	Naga_100443g2
Gene biotype	protein_coding
Gbkey	Gene

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002457.1	supercontig	CM002457.1:1192273..1197334 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
SRP229557	2021-06-30
PRJNA174770	2019-07-03
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ngnoL091	ngnoL091	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G00850	NO01G00850	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
rna1662	rna1662-protein	Nannochloropsis gaditana (N. gaditana B-31)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
rna1662	rna1662	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of rna1662

>rna1662-protein ID=rna1662-protein|Name=rna1662|organism=Nannochloropsis gaditana|type=polypeptide|length=1443bp
MSQGHPEGGFQSHVDGAPRSISKPPGINMSPSDTNREASRPLPLDASHTQ
AAEGLHQDGQVGGTNTTRRNGGGGGGGGTGGGTASSPGQGGKGGEEVDDP
ALMWEYVRGALSDPAMVGGNLADIQAYIQAQYGHSARQVRKPLATAIERA
LNERRIEKLGRHYRLKVEDDGLRAKMPPGDSAEGFGQDGTVTEEAPEPQR
EDKRNGKSNLPKAGGANGGDSETSASHAAGRDSEDRTAPGTHPPSSLTRT
PASRPEAPTGVANAAAPPSENSRALPMTGSGYGELSPALHAHYAAHYSAG
APAAYPQGPSPGRPAYTGYMGYPYPSPYASYAYPPPPSSGGEGGEGGPAG
AYGYHPAYTHPAYAAYQASYATGGYAHPYTYGGVYPYSTPASDAYNNYYY
PQHPQQHPSHPAPPPGSSKSQESSSAAPQPSHASGEMAPYGIVPAPPLLA
SPSSDPGPKKAGKGHPDVREISPGSATSLAVALGGAGGEGGGEEGGERRR
GKMAKKRAGESGVMTLEGEGRAMEDGMVAGADVGTLNHLARENEVRLAKR
RERERLQRKEKKARSALGGEKAEAMSAAAVGAMGGGREEGEEGGRKRARG
TGEEEEEEGGLGLGGAGHVMDAVEATGRGEVQEHGALRHELEAVEKRRAE
LERKREAKVRRLEEQQRLEVEVRENTEEKGRTGVEEREGRGGGGGPRRRS
MTPTATASPREGDDGGGWKKKVLSVASSPSSRGEREKALTPAELKEQQEE
IKQWTGELRRAKKGFQEMQEKVLELRQAREKEGAEWTEVKRRWQQSQTRF
ENYHRHKSELLLLSVKDDLETLVEEGRRGSRRQGGGGGERKGGRGGGAGR
GGSDRAQASVGPVLNLPPPSLLLTSPSLPSRAIPDLMEVTHFVRELAKPL
GLQPFPLLHLHTALTQGAGEGGAEEKGAGKGSLRGLVEEYRAVPSTLPPP
GSGRGGGKVGKAEGRPSRHFLSHFFLSFLRLIFNRHVVTGEAKEGEEGGP
RSGRGEPKESAAFLWNLTRFTWAELLNPLTLPEIARRFLVAKWREKKNML
QCPGALEEKVLVELFEVDGGYCPFGESFLGNDAMVVAATEALRCLQLESL
GAEYTLSLLRALMEEVQDVKAVQDFIQTKAERLLNLSETKNEVEKEMRKL
NREMKKLVMAAKAMGVEGVGRGASAGSGGAGGEGEEDEGGEDDEGGGKGG
AEEEDGLNGKDVSTTTGSTVLGSPEVQHLNSKIQKVSGQLKAAREELGLY
EREFARARSLPLGEDRYRNQYWYYEEDPRLYVHLRSGIGAGREGGGGTGL
VLPARAGQVLEPPPARAKGGEWGVFTEEEGVKKLMASLCGRAWREGQLLR
ALEKVREPLLEAMRRAEGYRLREGEVEGEGLESRVKEEEGSEEKIDSLAV
VKEEEVTEAMDVEGGEEEGKDEKEEDGEEVKEEEGEGGRRKDS

Synonyms

Publications