NO01G00710, NO01G00710 (gene) Nannochloropsis oceanica

Overview
NameNO01G00710
Unique NameNO01G00710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2540
Alignment locationchr1:179296..181835 -

Link to JBrowse

Properties
Property NameValue
DescriptionIon channel
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:179296..181835 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
Homology
BLAST of NO01G00710 vs. NCBI_GenBank
Match: EWM29005.1 (ion channel [Nannochloropsis gaditana])

HSP 1 Score: 416.4 bits (1069), Expect = 1.300e-112
Identity = 302/424 (71.23%), Postives = 335/424 (79.01%), Query Frame = 0
Query:   35 VNHYCGYVPPFGTTTVDTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAAKRL-EAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVDLTAPGGVDYALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGVHAAFNYWVHPPDALGTEG 458
            +N+Y GYVPP GTTTV+ +DL  FL+THG  +AP AFF +YI  RKPVLI+G LPD+ W AG   +WKD EYLK KAGKA V+VETR    E+YGQGKE TM F+EFV EVV+K N+LLYLTTQEL++GP+DRPA+MSSPLTELQ D PLRPSLL  LVPQNMNLWMGRSG                    NLYILL G+K FRL+APSEA NMYT+GKL+LVH NGR+ Y+ QP+  ADGR+  A KAWEAA+RL E A   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        PANFSRVDLTAP GVD AL+P+FPRH PLEVEV EGEM Y+PAGWFH V+SKGG+H A NYW HPPD  G  G
Sbjct:   36 INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGT--MWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEEVARRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFARTGKPPANFSRVDLTAPDGVDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGIHMAVNYWFHPPDGEGGGG 457          
BLAST of NO01G00710 vs. NCBI_GenBank
Match: GAX76316.1 (hypothetical protein CEUSTIGMA_g3762.t1 [Chlamydomonas eustigma])

HSP 1 Score: 202.2 bits (513), Expect = 3.700e-48
Identity = 137/398 (34.42%), Postives = 176/398 (44.22%), Query Frame = 0
Query:   71 FFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWE---AAKRLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVDLTAPGGVDYALYPSFP-RHLPLEVEVSEGEMFYVPAGWFHEVRSK-----------GGVHAAFNYWVHPPDAL 454
            F+  YI+ RKPVLIKG L D +W A     W D  YL  +AG   VKVE R   DE +G+G +  M+F EF+ + + KG++ LYL+TQ++E GP+  P +M  PL ELQ D    P L+G+LVPQ +NLWMG S S                   NLY+L+RG+K FRLF PS+A  MYT GK++ +H NGRI Y  Q  V  DG + +  K W    AA+   AA                                                                                           P +FS+VDL+   GV    +PSFP     LE  +  G+M Y+PAGWFHEV S             G H A NYW +PPD L
Sbjct:   33 FWHRYISQRKPVLIKGHLSDASWKATA--KWTD-SYLLSEAGHCNVKVEKRNSPDESFGKGTKIPMKFREFL-KYMSKGDDTLYLSTQDVEAGPDGFPELMGHPLLELQKDLVKVPELMGNLVPQQINLWMGASSSSSPSLKSGSSSGLHHDFHDNLYVLIRGRKRFRLFDPSKAPLMYTHGKIRRIHQNGRIVYDGQGEVLTDGSEQRDVKLWSNRVAAEEEVAA----------------AEAAVTRHEQGSETRLKNAEEQLEAVLEMQLDAALLEDSGAEDEEDDEISERFGGKAEPRSNSTGVTKRGAKNDHPPSFSKVDLSLSEGVLRKRFPSFPGASQALECIIEAGQMLYLPAGWFHEVTSSAVHYVSNIDCHAGGHMAVNYWFYPPDNL 410          
BLAST of NO01G00710 vs. NCBI_GenBank
Match: OQS06184.1 (hypothetical protein THRCLA_01771 [Thraustotheca clavata])

HSP 1 Score: 201.4 bits (511), Expect = 6.300e-48
Identity = 180/422 (42.65%), Postives = 223/422 (52.84%), Query Frame = 0
Query:   37 HYCGYVPPFGTTTVDTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPE-DRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAAKRLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVDLTAPGGVDY-ALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGV----HAAFNYWVHPPDA 453
            HY G+  P    T+D +++         D  P  FF  YIA R+PV+++G L D  ++A     W  ++YLK  AG A + VE R  ID+ YGQG E  M F EF+ E++EK + L YLTTQ++E  P+  RP +M+  +  L  DFPLRPSLLGHLVPQN+N+WMG +                     NLYILLRGQK FRL++PS+   MYT G+L  VH NGRI Y  +    A G D+K+D+A +AAK  EAA                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                P NFS V  T+   +D  A +P F         +  G+M Y+PA WFHEV S        H A NYW HPPDA
Sbjct:   26 HYNGWEVPEHDYTLDVIEI--------KDVTPEIFFNNYIACRRPVVLRGFLQDPEFVA--PSKW-SNDYLKATAGDAKLMVEERSSIDDSYGQGNEVPMTFREFL-ELLEKKDMLHYLTTQDVEADPDTGRPGLMAPFIEMLSHDFPLRPSLLGHLVPQNINIWMGNA-------IDGSTTGLHHDYHDNLYILLRGQKKFRLYSPSDVEAMYTRGQLLHVHANGRINYQGEETT-AYGADLKSDQAAQAAKAQEAA-----------------ERELELAERDAANGIPGAQARIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDELNSRRIVDKTIKDPINFSCVK-TSHSMIDLEAEFPLFSNAKAAYCTLQVGDMLYLPASWFHEVTSYSSKANDGHLALNYWYHPPDA 409          
BLAST of NO01G00710 vs. NCBI_GenBank
Match: CCI40257.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 199.9 bits (507), Expect = 1.800e-47
Identity = 136/427 (31.85%), Postives = 195/427 (45.67%), Query Frame = 0
Query:   35 VNHYCGYVPPFGTTTVDTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAA-KRLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVD---LTAPGGVDY--ALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGV--HAAFNYWVHPPDAL 454
            VNHYCG +    +  V  + L+           P  FFE YIA R PV+++G L D  + +   + W+ +EYL   +G+ LV+VE R    E +GQG+E  MRF  F+ ++ ++ +EL YLTTQ++E G   RP +M+  +  L DDFPLRP+++G+L+PQN+N+WMG + +                   N+YILLRG+K+FRL++P++A  +YT GKL  VH NGRI Y  + +  + G D  ++ A  AA ++ EA                                                                                            P NFS++D   L  P   +    LYP F        EV+ G++ Y+PA WFHEVRS G    H A NYW HPPD L
Sbjct:  518 VNHYCGCIIRDNSFRVSRIKLSEI--------DPKLFFERYIATRTPVVLEGALADSCFTS--LKKWQSNEYLDALSGEELVQVEYRANELEAFGQGREIEMRFHSFL-QLQDRCDELHYLTTQDVEEGNSGRPELMAPFVQRLSDDFPLRPAIMGNLIPQNINVWMGHAKN-------GASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAYVHHNGRINYEGE-ITTSYGADPSSEAASLAATEKEEAEQALILAERALENGDLGAKDAFEKAELRLEAAMDAILSAEYGDESDIEGESSSINDSDEGEARDDPQDEDYTSSPASSMAPKRRKVDRTVANPLNFSKIDAQLLQDPTSREQLNTLYPEFQHAQAAFCEVNAGDILYLPASWFHEVRSYGASDGHLALNYWFHPPDQL 925          
BLAST of NO01G00710 vs. NCBI_GenBank
Match: CCA17911.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 198.0 bits (502), Expect = 7.000e-47
Identity = 136/428 (31.78%), Postives = 194/428 (45.33%), Query Frame = 0
Query:   35 VNHYCGYVPPFGTTTVDTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAA-KRLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVDLTAPGG------VDYALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGV--HAAFNYWVHPPDAL 454
            VNHY G      +  +  + L+           P  FFE YIA R PV+++G L D  + A   + W+ +EYL   +G+ LV+VE R    E +G+G+E  M F  F+ ++VE+G+ L YLTTQ++E G   RP +M+  +  L++DFP+RP+L+G+L+PQN+N+WMG + +                   N+YILLRG+K+FRL++P++A  +YT GKL  VH NGRI Y  + +  A G D  ++ A  AA ++ EA                                                                                            P NFS++D +          VD  LYP F        EVS G++ Y+PA WFHEVRS G    H A NYW HPPD L
Sbjct: 2045 VNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSA--LKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARN-------GASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDTQAPEITSSPESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQL 2452          
BLAST of NO01G00710 vs. NCBI_GenBank
Match: CCA17912.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 198.0 bits (502), Expect = 7.000e-47
Identity = 136/428 (31.78%), Postives = 194/428 (45.33%), Query Frame = 0
Query:   35 VNHYCGYVPPFGTTTVDTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAA-KRLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVDLTAPGG------VDYALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGV--HAAFNYWVHPPDAL 454
            VNHY G      +  +  + L+           P  FFE YIA R PV+++G L D  + A   + W+ +EYL   +G+ LV+VE R    E +G+G+E  M F  F+ ++VE+G+ L YLTTQ++E G   RP +M+  +  L++DFP+RP+L+G+L+PQN+N+WMG + +                   N+YILLRG+K+FRL++P++A  +YT GKL  VH NGRI Y  + +  A G D  ++ A  AA ++ EA                                                                                            P NFS++D +          VD  LYP F        EVS G++ Y+PA WFHEVRS G    H A NYW HPPD L
Sbjct: 2069 VNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSA--LKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARN-------GASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDTQAPEITSSPESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQL 2476          
BLAST of NO01G00710 vs. NCBI_GenBank
Match: CCA17913.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 198.0 bits (502), Expect = 7.000e-47
Identity = 136/428 (31.78%), Postives = 194/428 (45.33%), Query Frame = 0
Query:   35 VNHYCGYVPPFGTTTVDTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAA-KRLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVDLTAPGG------VDYALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGV--HAAFNYWVHPPDAL 454
            VNHY G      +  +  + L+           P  FFE YIA R PV+++G L D  + A   + W+ +EYL   +G+ LV+VE R    E +G+G+E  M F  F+ ++VE+G+ L YLTTQ++E G   RP +M+  +  L++DFP+RP+L+G+L+PQN+N+WMG + +                   N+YILLRG+K+FRL++P++A  +YT GKL  VH NGRI Y  + +  A G D  ++ A  AA ++ EA                                                                                            P NFS++D +          VD  LYP F        EVS G++ Y+PA WFHEVRS G    H A NYW HPPD L
Sbjct: 2069 VNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSA--LKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARN-------GASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDTQAPEITSSPESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQL 2476          
BLAST of NO01G00710 vs. NCBI_GenBank
Match: CCA17914.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 198.0 bits (502), Expect = 7.000e-47
Identity = 136/428 (31.78%), Postives = 194/428 (45.33%), Query Frame = 0
Query:   35 VNHYCGYVPPFGTTTVDTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAA-KRLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVDLTAPGG------VDYALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGV--HAAFNYWVHPPDAL 454
            VNHY G      +  +  + L+           P  FFE YIA R PV+++G L D  + A   + W+ +EYL   +G+ LV+VE R    E +G+G+E  M F  F+ ++VE+G+ L YLTTQ++E G   RP +M+  +  L++DFP+RP+L+G+L+PQN+N+WMG + +                   N+YILLRG+K+FRL++P++A  +YT GKL  VH NGRI Y  + +  A G D  ++ A  AA ++ EA                                                                                            P NFS++D +          VD  LYP F        EVS G++ Y+PA WFHEVRS G    H A NYW HPPD L
Sbjct: 2048 VNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSA--LKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARN-------GASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDTQAPEITSSPESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQL 2455          
BLAST of NO01G00710 vs. NCBI_GenBank
Match: CCA17915.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 198.0 bits (502), Expect = 7.000e-47
Identity = 136/428 (31.78%), Postives = 194/428 (45.33%), Query Frame = 0
Query:   35 VNHYCGYVPPFGTTTVDTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAA-KRLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVDLTAPGG------VDYALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGV--HAAFNYWVHPPDAL 454
            VNHY G      +  +  + L+           P  FFE YIA R PV+++G L D  + A   + W+ +EYL   +G+ LV+VE R    E +G+G+E  M F  F+ ++VE+G+ L YLTTQ++E G   RP +M+  +  L++DFP+RP+L+G+L+PQN+N+WMG + +                   N+YILLRG+K+FRL++P++A  +YT GKL  VH NGRI Y  + +  A G D  ++ A  AA ++ EA                                                                                            P NFS++D +          VD  LYP F        EVS G++ Y+PA WFHEVRS G    H A NYW HPPD L
Sbjct: 2048 VNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSA--LKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARN-------GASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDTQAPEITSSPESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQL 2455          
BLAST of NO01G00710 vs. NCBI_GenBank
Match: CCA17916.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 198.0 bits (502), Expect = 7.000e-47
Identity = 136/428 (31.78%), Postives = 194/428 (45.33%), Query Frame = 0
Query:   35 VNHYCGYVPPFGTTTVDTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRLWKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGNELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLWMGRSGSXXXXXXXXXXXXXXXXXXXNLYILLRGQKTFRLFAPSEAGNMYTVGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAA-KRLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANFSRVDLTAPGG------VDYALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGV--HAAFNYWVHPPDAL 454
            VNHY G      +  +  + L+           P  FFE YIA R PV+++G L D  + A   + W+ +EYL   +G+ LV+VE R    E +G+G+E  M F  F+ ++VE+G+ L YLTTQ++E G   RP +M+  +  L++DFP+RP+L+G+L+PQN+N+WMG + +                   N+YILLRG+K+FRL++P++A  +YT GKL  VH NGRI Y  + +  A G D  ++ A  AA ++ EA                                                                                            P NFS++D +          VD  LYP F        EVS G++ Y+PA WFHEVRS G    H A NYW HPPD L
Sbjct: 2047 VNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSA--LKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARN-------GASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDTQAPEITSSPESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQL 2454          
The following BLAST results are available for this feature:
BLAST of NO01G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29005.11.300e-11271.23ion channel [Nannochloropsis gaditana][more]
GAX76316.13.700e-4834.42hypothetical protein CEUSTIGMA_g3762.t1 [Chlamydom... [more]
OQS06184.16.300e-4842.65hypothetical protein THRCLA_01771 [Thraustotheca c... [more]
CCI40257.11.800e-4731.85unnamed protein product [Albugo candida][more]
CCA17911.17.000e-4731.78ion channel putative [Albugo laibachii Nc14][more]
CCA17912.17.000e-4731.78ion channel putative [Albugo laibachii Nc14][more]
CCA17913.17.000e-4731.78ion channel putative [Albugo laibachii Nc14][more]
CCA17914.17.000e-4731.78ion channel putative [Albugo laibachii Nc14][more]
CCA17915.17.000e-4731.78ion channel putative [Albugo laibachii Nc14][more]
CCA17916.17.000e-4731.78ion channel putative [Albugo laibachii Nc14][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008311NSK008311Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00710.1NO01G00710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668165gene_45Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100585g2gene1611Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00710.1NO01G00710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00710 ID=NO01G00710|Name=NO01G00710|organism=Nannochloropsis oceanica|type=gene|length=2540bp
CCACTCACTCACTCACGTCATGTAGTAACATCAATATGGAATGCAGTGTC
TTCTACATGTAGACGTATTCGTGGATGATGCGCATGACATGCTCACATTT
GACCTAGTGGCCACCAGTGATTTTTTTTTAAAAAAAAACTGTCCTCCTTT
GCCCCCTGGTTGCAGCACCGCGGCCTCTTCGATCACTCACACACAACTTT
TGTTCTACCAACACCTCTCCTAAGCGCAATTCTTTCTTTATCTCTATCCC
TCGGCATTTGTCTTGGCTGCATGGGCGGGAACTTCTACTCAGTTTTGTTT
CCTCGCCATGCATTGAAAATCACAACAATGTCAAATCAATCGCTTCTATC
ATCGACCTCATACCCACCCCAAAGGACCTCCACATCCACTGACATACGAC
ACCGGCATGGCCTCCACTCCCGCATCTACCATCAGCACTATCTCTTCTAG
CCCTCCACCCAAAAAGAAAGCCAAGTCCTCCTCGTCCCCCTCCTCCTCCT
CCCCGTTCGTCAACCACTACTGCGGCTATGTGCCTCCGTTCGGCACCACC
ACCGTTGATACCCTTGACCTTGCATCCTTCCTAGCGACACACGGCGCCGA
CAAAGCACCTGCTGCCTTCTTCGAGGAGTACATTGCTTTGCGCAAGCCTG
TCCTCATCAAGGGTGTCTTGCCCGACGAAGCCTGGCTAGCGGGCGTGGGG
AGGCTATGGAAGGACCACGAGTATTTAAAGAAGAAAGCGGGCAAGGCCTT
GGTGAAGGTGGAGACCCGGGGTGGGATAGATGAGAAATATGGACAAGGAA
AAGAAAGGACGATGAGGTTCGACGAGTTTGTGGAGGAAGTGGTTGAAAAG
GGGAATGAGCTGTTGTACTTGgtaaggtgggagaggggcgggcgggaagg
agggagggagagagggagagagggagagagggagaggggaggataaaaga
gcagagaagaatgcaggaaaaggatgcatttactaccttatacttacaag
cgccttgtaattgtgtattgttcactccttttcttccttcctttctccct
ccctccctccattctcctagACCACTCAAGAACTCGAAGTTGGACCGGAG
GACCGTCCTGCCATCATGTCAAGCCCTCTCACCGAGCTTCAGGATGACTT
CCCCCTCCGCCCCTCCCTTCTTGGTCATCTCGTCCCCCAAAATATGAACC
TATGGATGGGTCGCAGTGGCAGCAGCAGCGGCAGTAGCAGCAGCGGCAGC
AGCAGTGGGTTGCACCACGACTACCACGACAATCTGTACATCTTGCTAAG
GGGGCAGAAGACATTCCGTCTCTTCGCACCCTCCGAAGCCGGCAACATGT
ATACAGTGGGCAAGTTGAAGCTGGTGCATCCCAACGGgtacgtcctccct
ccctcccgcccgccctccttcccatgcttctactcgtcgcgtcctatgct
ttttctcactcgcactatgagacttgctcacactcacactcacacacaca
cacacacacttgctctctctgtctctctctctctctctctctctctctca
cacacacacacacacacacacacacacacactcacacacacacacacatg
tttatatatacatatatataaacatattcatgtatataataccaattgtc
tatgtcgacactcccacacactcgcaagaacgaaaaacacactcgcacgc
acacacttattcacacatctacccgcatatacacacacatgtatacatac
gccctcctcgcagTCGCATCCAATACCATGACCAACCGATGGTCTATGCT
GACGGCCGGGACATGAAGGCGGACAAGGCCTGGGAGGCTGCCAAAAGATT
GGAAGCAGCAGCAGCAGCAGCAGGTGAAGGAGACGGAGGAGGGGGAGGCG
AGGGAGGGAAGGAAGGAGGGGGAGGAGACAACGAATTGGAGGCGGCATTG
GAGGCGGTCTTAGATGCGGAGATGGAGGGGAGGGACGAGGACGAGGACGA
GGACGAGGACGAGGACGAGGAAGCGTGGAATCAGGGAGACAAACCGGCCA
GCCCCGCCCTCCCTCCCTCCCTTTCTCCCCCCTCTTCCTCCATCGCTTCC
TTCACTACCACCTACACTCCCTCGGGAGAACCCCCCGCAAATTTCTCTCG
CGTGGACCTGACTGCGCCTGGTGGGGTGGACTACGCCCTCTATCCCTCTT
TCCCCCGGCACCTCCCCCTCGAGGTGGAAGTGAGTGAAGGAGAGATGTTT
TACGTACCAGCGGGATGGTTCCATGAAGTCAGGAGCAAGGGAGGGGTGCA
TGCGGCTTTTAACTATTGGGTTCATCCGCCCGATGCCCTGGGGACGGAGG
GCGGGACGGAGGGCGGGACGGAGGGCGGTTTCGAGCGGCCTTACGTGAGT
GATTTTTGGGAGAGGGACTGGAGGGAACGAGGGAGGGTGAGGGGAGGGGG
CTTGGGAGGGATCTAGGCCATCTCTTCATGTACAGTAGGAAGAGACACGC
GTACCGAAAGAAAGGGGAGGCACAAAAAACAGAGAGATAG
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protein sequence of NO01G00710.1

>NO01G00710.1-protein ID=NO01G00710.1-protein|Name=NO01G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=495bp
MASTPASTISTISSSPPPKKKAKSSSSPSSSSPFVNHYCGYVPPFGTTTV
DTLDLASFLATHGADKAPAAFFEEYIALRKPVLIKGVLPDEAWLAGVGRL
WKDHEYLKKKAGKALVKVETRGGIDEKYGQGKERTMRFDEFVEEVVEKGN
ELLYLTTQELEVGPEDRPAIMSSPLTELQDDFPLRPSLLGHLVPQNMNLW
MGRSGSSSGSSSSGSSSGLHHDYHDNLYILLRGQKTFRLFAPSEAGNMYT
VGKLKLVHPNGRIQYHDQPMVYADGRDMKADKAWEAAKRLEAAAAAAGEG
DGGGGGEGGKEGGGGDNELEAALEAVLDAEMEGRDEDEDEDEDEDEEAWN
QGDKPASPALPPSLSPPSSSIASFTTTYTPSGEPPANFSRVDLTAPGGVD
YALYPSFPRHLPLEVEVSEGEMFYVPAGWFHEVRSKGGVHAAFNYWVHPP
DALGTEGGTEGGTEGGFERPYVSDFWERDWRERGRVRGGGLGGI*
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Synonyms
Publications