NO01G00620, NO01G00620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO01G00620 vs. NCBI_GenBank
Match: EWM28986.1 (hypothetical protein Naga_100501g3 [Nannochloropsis gaditana]) HSP 1 Score: 268.1 bits (684), Expect = 6.900e-68 Identity = 231/831 (27.80%), Postives = 305/831 (36.70%), Query Frame = 0 Query: 6 NSIVFLALGSLGDLLPLLAIARRIAQQDHDQLD--------------VVVVTHAQYLSRLHALLHQSSNPLSPLRLV-LRGIPTPPLPLPNAGPSHVQHELDACLAACRIHTPIALLAFNLVAKFGIHLAELLSIPSYVLLHPSLAPPSPEPSLAYVRSMLGANLFKMMLRVEESEERFKEMTHWMLSLFLPVYHTFRERHGLCPCISSPSFQPXXXXXXXXXXXXXXXXXXLTGGTPLLYGVSEFFFPKPGYWPKAAVFCGAWRW-EEEDVR-----EGKEEWKEKWMPSEALQRFVEGEEGKEDTEATTCALARKGGEGEGKEGAMALPVLPASLPRPPLICLDMGSCVEVGLRTRSEWEGLIEGVVEAL-----------------------------------------------------------------------------RRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGY---------------------------------------------------------------------GSGGFRL---------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCDDILRLPVEEYVPHSWLFPRCHLVLHHGGLGSTMACIGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQLVLPCTEEQRVWGERVAYLGIGAVMGREGEQ-----------------DGGIEEAVYQALKGLERGREICLKTIRRYAGWLREEDGVGRAVEVLM 596 ++++FLALGSLGD+LP+LA+A R + +LD +V +TH YL RL LL ++ LS ++ + GI +PPLPL AGP V EL+ CLAA R H PIALLA NLVA+FG+H+ E+L +R++LG +++ + +R + M + MLSLFLP YH FRERHGL PC+SSPS P L G P LYGVSE FFPKPGYWP+++VFCGAW W +EE+V EG +E E W+P E L+RFVEGE ++ T R+ G+GK + + A PPLICLDMGS +E L R EWE L+E V+ AL R + GY G GFRL + I RLP +VPH+WLFPRC LV+HHGGLG+ MAC+ R VPQL++P T+EQ +W RV +LG+G + REG + VYQAL+ +ERGR +CL+ + +Y W EDGVGRAV++L+ Sbjct: 11 HTVIFLALGSLGDVLPVLAVAHRFGR----RLDRRGPCPSRRKHLPALVFITHTLYLPRLKTLLERALPRLSQAPVLHIEGIDSPPLPLRRAGPVSVPDELEQCLAASRGHAPIALLACNLVARFGVHIGEILXXXXXXXXXXXXXXXXXXXXXXLLRNLLGPKFLRLL--EDTGTDRLRYMEYGMLSLFLPAYHAFRERHGLSPCLSSPSAPP------APRTASQAALYALRGNLPFLYGVSEGFFPKPGYWPESSVFCGAWTWAQEEEVGREGGWEGGQEDGEGWVPDEELRRFVEGEGWPPKKKSATEGNVRRVSGGDGK---VKVSARTAGSSLPPLICLDMGSMIETELMGREEWEALVEEVLVALKKVFPSSTPAAALSVPASTPFAARRIAFRPPSPSHPSPSTAPWAPLSTPCLLSSLAPPVWPPSPSLNVAREGKAGMSREGRFGHGVKGPSPSGGERGKKRPRRAGRVQGGYAAEEKGEKKGKGCLKEEARGESERERLGXXXXXXXXXXXXXXXXXXXTKEGTKDEEEGRGNAGTTNTFLGEAGFRLLLLHAPDQSCGAGKSRGGNPALPARRQRLEQERKEIPPWLSRRHGGGAKRLVSPKNQDLRLPRQEPLPPHVQAEQSPTSPTSLPPFHHPGSFPSHPYSSPYIFRLPPTTFVPHTWLFPRCRLVIHHGGLGTVMACLMGR---------------------------RRGREGNGVPQLIVPITKEQEMWAMRVEHLGVGRGLSREGGKGRXXXXXXXXXXXXXXXXXXXXXXVYQALQEMERGRAMCLENVAQYREWFLAEDGVGRAVDLLV 799
BLAST of NO01G00620 vs. NCBI_GenBank
Match: XP_024525515.1 (sterol 3-beta-glucosyltransferase UGT80A2 [Selaginella moellendorffii]) HSP 1 Score: 73.6 bits (179), Expect = 2.500e-9 Identity = 72/265 (27.17%), Postives = 105/265 (39.62%), Query Frame = 0 Query: 3 STSNSIVFLALGSLGDLLPLLAIARRIAQQDHDQLDVVVVTHAQYLSRLHALLHQSSNPLSPLRLVLRGIPTPPLPLPN----------AGPSHVQHELDACLAACRIHTPIALLAFNLVAKFGIHLAELLSIPSYVLLHPSLAPPSPEPSLAYVRSMLGANLFKMMLRVEESEERFKEMTHWMLSLFLPVYHTFRERH---GLCPCISSPSFQPXXXXXXXXXXXXXXXXXXLTGGTPLLYGVSEFFFPKPGYWPKAAVFCGAW 255 +T N VF+A G+LGD+LPL +A +A+ + + +TH + L AL L P +VLR + TP + P H++ LDA + + H I+ +A N A G H+AELL++ ++L P E +K++THWM LF + ++R R CP + P PLLYG SE PGYWP + CG W Sbjct: 2 ATCNVGVFMAFGTLGDILPLAYVAIALARAT-TKYSITFITHDSH-QVLKAL-------LLPAGIVLRSVSTPAVLTPEQKRDSFPDSLTSEIHMEECLDA-IESQESHGTISFIAINFFALEGWHIAELLNV-RCIVLAPYXXXXXXXXXXXXXXXXXXXXXXXXXXXASAEEVGWKDVTHWMWPLFTDRWTSWRVRKLRLSACPLTDPVTELPVHDWPR---------------SVPLLYGFSEKVVECPGYWPSSVRVCGFW 240
BLAST of NO01G00620 vs. NCBI_GenBank
Match: XP_024534779.1 (sterol 3-beta-glucosyltransferase UGT80A2 isoform X4 [Selaginella moellendorffii]) HSP 1 Score: 72.8 bits (177), Expect = 4.300e-9 Identity = 71/265 (26.79%), Postives = 106/265 (40.00%), Query Frame = 0 Query: 3 STSNSIVFLALGSLGDLLPLLAIARRIAQQDHDQLDVVVVTHAQYLSRLHALLHQSSNPLSPLRLVLRGIPTPPLPLPN----------AGPSHVQHELDACLAACRIHTPIALLAFNLVAKFGIHLAELLSIPSYVLLHPSLAPPSPEPSLAYVRSMLGANLFKMMLRVEESEERFKEMTHWMLSLFLPVYHTFRERH---GLCPCISSPSFQPXXXXXXXXXXXXXXXXXXLTGGTPLLYGVSEFFFPKPGYWPKAAVFCGAW 255 +T N VF+A G+LGD+LPL +A +A+ + + +TH + L AL L P +VLR + TP + P H++ LDA + + + I+ +A N A G H+AELL++ +++L P E +K++THWM LF + ++R R CP + P PLLYG SE PGYWP + CG W Sbjct: 2 ATCNVGVFMAFGTLGDILPLAYVAIALARAT-TKYSITFITHDSH-QVLKAL-------LLPAGIVLRSVSTPAVLTPEQKRDSFPDSLTSEIHMEECLDA-IESQESNGTISFIAINFFALEGWHIAELLNV-RFIVLAPYXXXXXXXXXXXXXXXXXXXXXXXXXXXASAEEVGWKDVTHWMWPLFTDRWTSWRVRKLRLSACPLTDPVTELPVHDWPR---------------SVPLLYGFSEKVVECPGYWPSSVRVCGFW 240
BLAST of NO01G00620 vs. NCBI_GenBank
Match: EFJ33591.1 (hypothetical protein SELMODRAFT_406232 [Selaginella moellendorffii]) HSP 1 Score: 69.3 bits (168), Expect = 4.700e-8 Identity = 81/301 (26.91%), Postives = 115/301 (38.21%), Query Frame = 0 Query: 3 STSNSIVFLALGSLGDLLPLLAIARRIAQQDHDQLDVVVVTHAQYLSRLHALLHQSSNPLSPLRLVLRGIPTPPLPLP--------------NAGPS-------------HVQHELDACLAACRIHTPIALLAFNLVAKFGI-------------------HLAELLSIPSYVLLHPSLAPPSPEPSLAYVRSMLGANLFKMMLRVEESEERFKEMTHWMLSLFLPVYHTFRERH---GLCPCISSPSFQPXXXXXXXXXXXXXXXXXXLTGGTPLLYGVSEFFFPKPGYWPKAAVFCGAW 255 +T N VF+A G+LGD+LPL +A +A+ + + +TH + L AL L P +VLR + TP + P N P H++ LDA + + H I+ +A N A G+ H+AELL++ AP S E S V L+K + R E +K++THWM LF + ++R R CP + P PLLYG SE PGYWP + CG W Sbjct: 127 ATCNVGVFMAFGTLGDILPLAYVAIALARAT-TKYSITFITHDSH-QVLKAL-------LLPAGIVLRSVSTPAVLTPEQKRDSFPDSLTSGNTVPKCELSLIRARCVEIHMEECLDA-IESQESHGTISFIAINFFALVGLSEFTITLLPVFRFLRQEGWHIAELLNV---------RAPASFERSFRQVY----PRLYKRLQRASAEEVGWKDVTHWMWPLFTDRWTSWRVRKLRLSACPLTDPVTELPVHDWPR---------------SVPLLYGFSEKVVECPGYWPSSVRVCGFW 389
BLAST of NO01G00620 vs. NCBI_GenBank
Match: WP_092638735.1 (glycosyltransferase [Acetanaerobacterium elongatum] >SDM94628.1 UDP:flavonoid glycosyltransferase YjiC, YdhE family [Acetanaerobacterium elongatum]) HSP 1 Score: 68.9 bits (167), Expect = 6.200e-8 Identity = 47/146 (32.19%), Postives = 67/146 (45.89%), Query Frame = 0 Query: 450 YVPHSWLFPRCHLVLHHGGLGSTMACIGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQLVLPCTEEQRVWGERVAYLGIGAV-MGREGEQDGGIEEAVYQALKGLERGREICLKTIRRYAGWLREEDGVGRAVEVL 595 +VPHSWLF R V+HHGG G+T A + A +P +V+P +Q WG RV LG+G + + R+ + +A+ QA+ G E LK +R LREEDGVG AV+++ Sbjct: 303 FVPHSWLFERVAAVVHHGGAGTTAAGLRA-----------------------------------GLPTIVVPFGGDQPYWGNRVHALGVGPMPIPRKKLTAQRLSDAILQAV-----GDETILKNAKRLGKRLREEDGVGNAVKII 408
BLAST of NO01G00620 vs. NCBI_GenBank
Match: XP_024534775.1 (sterol 3-beta-glucosyltransferase UGT80A2 isoform X3 [Selaginella moellendorffii]) HSP 1 Score: 67.4 bits (163), Expect = 1.800e-7 Identity = 73/281 (25.98%), Postives = 107/281 (38.08%), Query Frame = 0 Query: 3 STSNSIVFLALGSLGDLLPLLAIARRIAQQDHDQLDVVVVTHAQYLSRLHALLHQSSNPLSPLRLVLRGIPTPPLPLP--------------NAGPS---------HVQHELDACLAAC---RIHTPIALLAFNLVAKFGIHLAELLSIPSYVLLHPSLAPPSPEPSLAYVRSMLGANLFKMMLRVEESEERFKEMTHWMLSLFLPVYHTFRERH---GLCPCISSPSFQPXXXXXXXXXXXXXXXXXXLTGGTPLLYGVSEFFFPKPGYWPKAAVFCGAW 255 +T N VF+A G+LGD+LPL +A +A+ + + +TH + L AL L P +VLR + TP + P N P V+ ++ CL A + I+ +A N A G H+AELL++ +++L P E +K++THWM LF + ++R R CP + P PLLYG SE PGYWP + CG W Sbjct: 2 ATCNVGVFMAFGTLGDILPLAYVAIALARAT-TKYSITFITHDSH-QVLKAL-------LLPAGIVLRSVSTPAVLTPEQKRDSFPDSLTSGNTVPKCEVSLIRARRVEIHMEECLDAIESQESNGTISFIAINFFALEGWHIAELLNV-RFIVLAPYXXXXXXXXXXXXXXXXXXXXXXXXXXXASAEEVGWKDVTHWMWPLFTDRWTSWRVRKLRLSACPLTDPVTELPVHDWPR---------------SVPLLYGFSEKVVECPGYWPSSVRVCGFW 257
BLAST of NO01G00620 vs. NCBI_GenBank
Match: WP_073548335.1 (glycosyltransferase [Chroogloeocystis siderophila] >OKH28539.1 hypothetical protein NIES1031_04740 [Chroogloeocystis siderophila 5.2 s.c.1]) HSP 1 Score: 67.0 bits (162), Expect = 2.300e-7 Identity = 44/144 (30.56%), Postives = 65/144 (45.14%), Query Frame = 0 Query: 451 VPHSWLFPRCHLVLHHGGLGSTMACIGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQLVLPCTEEQRVWGERVAYLGIGAVMGREGEQDGGIEEAVYQALKGLERGREICLKTIRRYAGWLREEDGVGRAVEVL 595 VPH WLFP C V+HHGG G+T A + A +P +VLP +Q WG+RVA LG G + R+ E ++ + A++ + +I + R + +R EDGV RAVE++ Sbjct: 297 VPHDWLFPLCRAVVHHGGAGTTAAALRA-----------------------------------GIPSIVLPFGVDQPFWGQRVADLGAGTLPIRQQEL---TQDKLIAAIQDV-IDNKIMIDRARALSDRIRAEDGVKRAVEII 401
BLAST of NO01G00620 vs. NCBI_GenBank
Match: WP_105221468.1 (glycosyltransferase [Gloeocapsopsis sp. AAB1 = 1H9]) HSP 1 Score: 67.0 bits (162), Expect = 2.300e-7 Identity = 47/153 (30.72%), Postives = 63/153 (41.18%), Query Frame = 0 Query: 446 PVEEYVPHSWLFPRCHLVLHHGGLGSTMACIGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQLVLPCTEEQRVWGERVAYLGIGAVMGREGEQDGGIEEAVYQALKGLERGREICLK----TIRRYAGWLREEDGVGRAVEVL 595 P+ +PH WLFP C V+HHGG G+T A + A VP +V+P +Q WG+RVA LG+G + + E A Q + IC K T R +R EDGV RAVE++ Sbjct: 291 PITGNIPHDWLFPLCRAVVHHGGAGTTAAALRA-----------------------------------GVPSIVIPFGVDQPFWGQRVADLGVGTLPISQKELTRDQFVAAIQNV--------ICNKNMRVTARALGDRIRAEDGVKRAVEII 400
BLAST of NO01G00620 vs. NCBI_GenBank
Match: WP_093935066.1 (glycosyltransferase [Amycolatopsis thailandensis] >OXM55237.1 glycosyl transferase [Amycolatopsis thailandensis]) HSP 1 Score: 65.1 bits (157), Expect = 8.900e-7 Identity = 52/158 (32.91%), Postives = 66/158 (41.77%), Query Frame = 0 Query: 440 DDILRLPVEEYVPHSWLFPRCHLVLHHGGLGSTMACIGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPQLVLPCTEEQRVWGERVAYLGIGAVMGREGEQDGGIEEAVYQALKG--LERGREICLKTIRRYAG-WLREEDGVGRAVEVL 595 DD+L + + VPH WLFPR V+HHGG G+T A + A VP LV P +Q WG+RV+ LG G + + E AL LE + + +Y G LREEDGV RA EVL Sbjct: 292 DDLLAI---QDVPHEWLFPRTAAVVHHGGAGTTAAALRA-----------------------------------GVPALVCPVFSDQPYWGDRVSRLG-------AGPRPLPLRELTADALTARLLELSGNLLFRRGAQYVGARLREEDGVARACEVL 404 The following BLAST results are available for this feature:
BLAST of NO01G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00620 ID=NO01G00620|Name=NO01G00620|organism=Nannochloropsis oceanica|type=gene|length=1869bpback to top protein sequence of NO01G00620.1 >NO01G00620.1-protein ID=NO01G00620.1-protein|Name=NO01G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=623bpback to top Synonyms
Publications
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