NO01G00590, NO01G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00590 vs. NCBI_GenBank
Match: EWM28989.1 (Armadillo-like helical [Nannochloropsis gaditana]) HSP 1 Score: 228.8 bits (582), Expect = 2.800e-56 Identity = 110/171 (64.33%), Postives = 135/171 (78.95%), Query Frame = 0 Query: 204 LRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYESVMQ 375 LRL+W+ P+ L+YR + PLFLEGLRE +DPYR+LAV+G +DL+ +CP KL AC+PFLL PLKRALDT P+ILAT+L + Q+FIL DP RIGPALVP YH LGASAV NK R +GEM Q RRLCV++L+NETL LLEITGGR+AF HIRYM+P+Y+SV+Q Sbjct: 20 LRLQWYVHPTKLDYRVVLPLFLEGLREVKDPYRYLAVRGSMDLIASCPSKLMACVPFLLPPLKRALDTRHPLILATSLTVLQEFILADPSRIGPALVPHYHQLLGASAVINKQTYGNEDR--KGEMASSQ-RRLCVTDLMNETLTLLEITGGRDAFLHIRYMVPTYDSVLQ 187
BLAST of NO01G00590 vs. NCBI_GenBank
Match: CEM29660.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 160.6 bits (405), Expect = 9.400e-36 Identity = 89/214 (41.59%), Postives = 120/214 (56.07%), Query Frame = 0 Query: 158 PNPFHQAYDRGTLPASIQHRREPXXXXXXXXXXXXXXXXXXXXXRRLRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYES 372 P+ F + YDRG LP ++ H ++ W P L+Y P+F +GLRE DPYRFLAVQGV DL+EA K+ +P L+ P+K AL+T I+ T LK+ Q +L+ E +G ALVP+Y L VFN YK R + +MD+GQR+R + EL+ ETLEL EI GG +AF +I+YMIP+YES Sbjct: 125 PSEFRRFYDRGDLPINVFH-----------------------GGTGNKIAWKVKPEQLDYHHYLPIFFDGLREKEDPYRFLAVQGVFDLLEAGGSKILPVVPQLIIPIKTALNTRDHDIMCTMLKVLQALVLSG-EMVGEALVPYYRQIL---PVFNLYK--NRKTSTGDQMDYGQRKRANLGELIEETLELFEIHGGEDAFINIKYMIPTYES 309
BLAST of NO01G00590 vs. NCBI_GenBank
Match: XP_002785949.1 (hypothetical protein, conserved [Perkinsus marinus ATCC 50983] >EER17745.1 hypothetical protein, conserved [Perkinsus marinus ATCC 50983]) HSP 1 Score: 158.3 bits (399), Expect = 4.600e-35 Identity = 83/217 (38.25%), Postives = 120/217 (55.30%), Query Frame = 0 Query: 158 PNPFHQAYDRGTLPASIQHRREPXXXXXXXXXXXXXXXXXXXXXRRLRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYESVMQ 375 P F + YDRG LP + H R+ W L+Y P+F +G+RE +PYRFLAV+GV D++E ++ IP L+ P+K AL++ P ++ATTLK+ Q +L+ E IG ALVP+Y L +F IH + + MD+GQR+RL + +LV ETLE+ EI GG +AF +I+YM+P+YESV + Sbjct: 104 PTEFRKFYDRGDLPIQVSH-----------------------AGTWNRIAWKADIEKLDYHHYLPIFFDGIREKEEPYRFLAVEGVYDMLEKGGARILPVIPQLIIPIKTALNSRDPEVIATTLKMLQTLVLS-AEMIGEALVPYYRQILPIFNIFKNSNIHCKDK-----MDYGQRKRLVLGDLVEETLEIFEIHGGEDAFINIKYMVPTYESVCE 291
BLAST of NO01G00590 vs. NCBI_GenBank
Match: XP_015658190.1 (putative mitochondrial PACRGA [Leptomonas pyrrhocoris] >XP_015658189.1 putative mitochondrial PACRGA [Leptomonas pyrrhocoris] >XP_015658188.1 putative mitochondrial PACRGA [Leptomonas pyrrhocoris] >KPA79749.1 putative mitochondrial PACRGA [Leptomonas pyrrhocoris] >KPA79750.1 putative mitochondrial PACRGA [Leptomonas pyrrhocoris] >KPA79751.1 putative mitochondrial PACRGA [Leptomonas pyrrhocoris]) HSP 1 Score: 156.0 bits (393), Expect = 2.300e-34 Identity = 85/214 (39.72%), Postives = 120/214 (56.07%), Query Frame = 0 Query: 158 PNPFHQAYDRGTLPASIQHRREPXXXXXXXXXXXXXXXXXXXXXRRLRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYES 372 P F +AYDRG LP +I H P + W L+Y P+F +G+REN +PY FLA QG LDL+E K+ +P L+ P+K AL+T P I+ TL+I Q +++ + IG ALVP++ L VFN +K + R++ MD+GQR R V +LVNETL+LLE+ GG +A+ +I+YM+PSYES Sbjct: 117 PTEFRRAYDRGDLPLAICHGGRP------------------------SIDWKVEVEKLDYHHYLPIFFDGIRENEEPYMFLARQGCLDLLERGGPKILPTVPQLILPIKTALNTRHPDIICATLRIIQQLVVSG-DLIGEALVPYFRQIL---PVFNLFKNVHKKRSRSDAMDYGQRNRDDVGDLVNETLQLLELHGGEDAYINIKYMVPSYES 302
BLAST of NO01G00590 vs. NCBI_GenBank
Match: XP_001683981.1 (conserved hypothetical protein [Leishmania major strain Friedlin] >CAJ05572.1 conserved hypothetical protein [Leishmania major strain Friedlin]) HSP 1 Score: 154.5 bits (389), Expect = 6.700e-34 Identity = 87/214 (40.65%), Postives = 118/214 (55.14%), Query Frame = 0 Query: 158 PNPFHQAYDRGTLPASIQHRREPXXXXXXXXXXXXXXXXXXXXXRRLRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYES 372 P F +AYDRG LP SI H P + W L+Y P+F +G+RE +PY FLA QG LDL+E K+ IP L+ P+K AL+T P I+ TL+I Q +++D + IG ALVP+Y L V N +K + R++ MD+GQR R V +LVNETL+LLE GG +A+ +I+YM+PSYES Sbjct: 120 PTEFRRAYDRGDLPISICHGSRP------------------------TVDWKVEVEKLDYHHYLPIFFDGIRETEEPYMFLARQGCLDLLERGGPKILPTIPQLIIPIKTALNTRHPDIICATLRILQQLVVSD-DLIGEALVPYYRQIL---PVLNLFKNVHKRRSRSDAMDYGQRSRDDVGDLVNETLQLLEQHGGEDAYINIKYMVPSYES 305
BLAST of NO01G00590 vs. NCBI_GenBank
Match: XP_003876280.1 (conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] >CBZ27796.1 conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103]) HSP 1 Score: 153.7 bits (387), Expect = 1.100e-33 Identity = 87/214 (40.65%), Postives = 117/214 (54.67%), Query Frame = 0 Query: 158 PNPFHQAYDRGTLPASIQHRREPXXXXXXXXXXXXXXXXXXXXXRRLRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYES 372 P F +AYDRG LP +I H P + W L+Y P+F +G+RE +PY FLA QG LDL+E K+ IP L+ P+K AL+T P I+ TL+I Q I++D + IG ALVP+Y L V N +K + R + MD+GQR R V +LVNETL+LLE GG +A+ +I+YM+PSYES Sbjct: 120 PTEFRRAYDRGDLPIAICHGSRP------------------------TVDWKVEVEKLDYHHYLPIFFDGIRETEEPYMFLARQGCLDLLERGGPKILPTIPQLIIPIKTALNTRHPDIICATLRILQQLIVSD-DLIGEALVPYYRQIL---PVLNLFKNVHKRRGRSDAMDYGQRNRDDVGDLVNETLQLLEQHGGEDAYINIKYMVPSYES 305
BLAST of NO01G00590 vs. NCBI_GenBank
Match: XP_001466260.1 (conserved hypothetical protein [Leishmania infantum JPCM5] >XP_003861560.1 hypothetical protein, conserved [Leishmania donovani] >CAM68700.1 conserved hypothetical protein [Leishmania infantum JPCM5] >CBZ34860.1 hypothetical protein, conserved [Leishmania donovani] >SOX66032.1 Parkinco-regulatedprotein-putative|Pfam:PF10274 [Leishmania infantum]) HSP 1 Score: 153.7 bits (387), Expect = 1.100e-33 Identity = 86/214 (40.19%), Postives = 118/214 (55.14%), Query Frame = 0 Query: 158 PNPFHQAYDRGTLPASIQHRREPXXXXXXXXXXXXXXXXXXXXXRRLRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYES 372 P F +AYDRG LP +I H P + W L+Y P+F +G+RE +PY FLA QG LDL+E K+ IP L+ P+K AL+T P I+ TL+I Q +++D + IG ALVP+Y L V N +K + R++ MD+GQR R V +LVNETL+LLE GG +A+ +I+YM+PSYES Sbjct: 120 PTEFRRAYDRGDLPIAICHGSRP------------------------TVDWKVEVEKLDYHHYLPIFFDGIRETEEPYMFLARQGCLDLLERGGPKILPTIPQLIIPIKTALNTRHPDIICATLRILQQLVVSD-DLIGEALVPYYRQIL---PVLNLFKNVHKRRSRSDAMDYGQRNRDDVGDLVNETLQLLEQHGGEDAYINIKYMVPSYES 305
BLAST of NO01G00590 vs. NCBI_GenBank
Match: XP_002683010.1 (hypothetical protein NAEGRDRAFT_82851 [Naegleria gruberi] >EFC50266.1 hypothetical protein NAEGRDRAFT_82851 [Naegleria gruberi]) HSP 1 Score: 152.1 bits (383), Expect = 3.300e-33 Identity = 82/211 (38.86%), Postives = 119/211 (56.40%), Query Frame = 0 Query: 161 FHQAYDRGTLPASIQHRREPXXXXXXXXXXXXXXXXXXXXXRRLRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYES 372 F + Y+RG LP SI+H + W L+Y P+F +GLRE +PYRFLAVQG DL++ K+ CIP L+ P+K AL+T P I+ T LK+ Q +L++ E++G ALVP+Y L +FN +K T + N +++ QR+RL + +L+ ETL+LLE GG +AF +I+YMIP+YES Sbjct: 144 FRKFYERGDLPISIKHEGTN------------------------EIHWKVKAEKLDYHHYLPIFFDGLREKEEPYRFLAVQGTFDLLKYGKDKIVNCIPQLIIPIKTALNTRDPEIICTVLKVIQQLVLSN-EKVGEALVPYYRQIL---PIFNLFK--TNNINLGDAIEYSQRKRLNIGDLIEETLQLLEQEGGEDAFINIKYMIPTYES 324
BLAST of NO01G00590 vs. NCBI_GenBank
Match: KPI86669.1 (hypothetical protein ABL78_4284 [Leptomonas seymouri]) HSP 1 Score: 151.0 bits (380), Expect = 7.400e-33 Identity = 81/214 (37.85%), Postives = 119/214 (55.61%), Query Frame = 0 Query: 158 PNPFHQAYDRGTLPASIQHRREPXXXXXXXXXXXXXXXXXXXXXRRLRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYES 372 P F +AYDRG LP +I H P + W L++ P+F +G+REN +PY FLA QG LDL++ K+ +P L+ P+K AL+T P I+ TL+I Q +++ + IG ALVP++ L +FN +K + ++ MD+GQR R V +LVNETL+LLE+ GG +A+ +I+YM+PSYES Sbjct: 117 PTEFRRAYDRGDLPLAICHGSRP------------------------SIDWKVEVEKLDFHHYLPIFFDGIRENEEPYMFLARQGCLDLLKRGGPKILPTVPQLIIPIKMALNTRHPDIICATLRIIQQLVVSG-DLIGEALVPYFRQIL---PIFNLFKNVHKKHSRSDAMDYGQRNRDDVGDLVNETLQLLELHGGEDAYINIKYMVPSYES 302
BLAST of NO01G00590 vs. NCBI_GenBank
Match: OMJ83318.1 (hypothetical protein SteCoe_15781 [Stentor coeruleus]) HSP 1 Score: 150.6 bits (379), Expect = 9.700e-33 Identity = 83/211 (39.34%), Postives = 118/211 (55.92%), Query Frame = 0 Query: 161 FHQAYDRGTLPASIQHRREPXXXXXXXXXXXXXXXXXXXXXRRLRLKWHTPPSNLEYRSIFPLFLEGLRENRDPYRFLAVQGVLDLMEACPHKLFACIPFLLSPLKRALDTHQPIILATTLKIFQDFILTDPERIGPALVPFYHHFLGASAVFNKYKIHTRSRNQRGEMDWGQRRRLCVSELVNETLELLEITGGREAFEHIRYMIPSYES 372 F + YDRG +P ++ H ++ W L+Y P+F +GLRE DPYRFLA+QGV D++E +K+ IP L+ P+K AL+T P I+ LKI Q ++T + IG ALVP+Y L VFN +K ++ N ++D+ QR+R + EL+ ETLELLE TGG +AF +I+YMIP+YES Sbjct: 121 FRRFYDRGDMPIAVSH------------------------GGTNKIVWKVAVDQLDYHHYLPIFFDGLREKSDPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPIKTALNTRDPDIICVILKILQK-LVTSADMIGEALVPYYRQIL---PVFNIFK--QKNANYGDKIDYAQRKRQNIGELIQETLELLETTGGEDAFINIKYMIPTYES 301 The following BLAST results are available for this feature:
BLAST of NO01G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00590 ID=NO01G00590|Name=NO01G00590|organism=Nannochloropsis oceanica|type=gene|length=1125bpback to top protein sequence of NO01G00590.1 >NO01G00590.1-protein ID=NO01G00590.1-protein|Name=NO01G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bpback to top Synonyms
Publications
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