NO01G00360, NO01G00360 (gene) Nannochloropsis oceanica

Overview
NameNO01G00360
Unique NameNO01G00360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3225
Alignment locationchr1:83765..86989 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibosomal protein l5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:83765..86989 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:00080975S rRNA binding
GO:0005198structural molecule activity
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR025607Rbsml_L5e/L18P_C
IPR005485Rbsml_L5_euk/L18_arc
Homology
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: XP_002176750.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51213.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 380.9 bits (977), Expect = 3.700e-102
Identity = 196/307 (63.84%), Postives = 238/307 (77.52%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAAAAGADE 308
            MPFVK  KNK YF RYQ KFRRRREG+TDYR RKR+V QDKNKY +PKYRLVVRFTN   I QIVY+ ++GD++L  ANSKELARYGL VGLKNYAAAYCTGLL ARRLL K+GLD+ YEG  E D  I +T  E + + Y+V E++++K+PFRC+LDVG + TTTG+RVFG LKGA+DGGLDIP SEKRFPG+DRD K YDAD H+ERI G HV EY+ YL EED++ Y+  FA++I   V  D  EE+ E VH  IREDP+P+PK+ +S D++ +KR+AKLT +ERKARV  KK A  A   AD+
Sbjct:    1 MPFVKNTKNKAYFSRYQVKFRRRREGRTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNTQVICQIVYSLVDGDRILCQANSKELARYGLSVGLKNYAAAYCTGLLAARRLLQKVGLDDVYEGNSEVDATIVST--EYDKKKYFVDEVDEDKRPFRCLLDVGCKPTTTGHRVFGALKGAADGGLDIPHSEKRFPGFDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNQKYQEHFASFIAAEVEADGLEELYESVHEKIREDPSPSPKKDFSPDKS-FKRKAKLTLDERKARVQAKKDAKNAELAADD 304
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: XP_008911988.1 (hypothetical protein PPTG_15526 [Phytophthora parasitica INRA-310] >ETL79163.1 hypothetical protein L917_20133 [Phytophthora parasitica] >ETN02773.1 hypothetical protein PPTG_15526 [Phytophthora parasitica INRA-310] >KUF88272.1 hypothetical protein AM588_10004776 [Phytophthora nicotianae])

HSP 1 Score: 379.0 bits (972), Expect = 1.400e-101
Identity = 195/301 (64.78%), Postives = 236/301 (78.41%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKVLKNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+L  A+S EL RYGLKVGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFRC LD G++TTTTGNRVFG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H++E++  L E+D E     +A Y+K G+  DD E+++ KVH AIR DP+PA K+  + D+ KYKR AK + ++R+ARVA+KKA  A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQASSAELPRYGLKVGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVEEVADEKRPFRCYLDCGLRTTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAIHISEHMKELEEDDPEMLASHYAEYVKAGIDPDDLEDLITKVHEAIRADPSPAAKKEHTFDK-KYKRAAKRSRQQRQARVAQKKAHAAS 298
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: ETP30123.1 (hypothetical protein F442_20806 [Phytophthora parasitica P10297])

HSP 1 Score: 379.0 bits (972), Expect = 1.400e-101
Identity = 195/301 (64.78%), Postives = 236/301 (78.41%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKVLKNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+L  A+S EL RYGLKVGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFRC LD G++TTTTGNRVFG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H++E++  L E+D E     +A Y+K G+  DD E+++ KVH AIR DP+PA K+  + D+ KYKR AK + ++R+ARVA+KKA  A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQASSSELPRYGLKVGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVEEVADEKRPFRCYLDCGLRTTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAIHISEHMKELEEDDPEMLASHYAEYVKAGIDPDDLEDLITKVHEAIRADPSPAAKKDHTFDK-KYKRAAKRSRQQRQARVAQKKAHAAS 298
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: KUF73670.1 (60S ribosomal protein L5 [Phytophthora nicotianae])

HSP 1 Score: 379.0 bits (972), Expect = 1.400e-101
Identity = 195/301 (64.78%), Postives = 236/301 (78.41%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKVLKNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+L  A+S EL RYGLKVGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFRC LD G++TTTTGNRVFG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H++E++  L E+D E     +A Y+K G+  DD E+++ KVH AIR DP+PA K+  + D+ KYKR AK + ++R+ARVA+KKA  A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQASSAELPRYGLKVGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVEEVADEKRPFRCYLDCGLRTTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAIHISEHMKELEEDDPEMLASHYAEYVKAGIDPDDLEDLITKVHEAIRADPSPAAKKEHTFDK-KYKRAAKRSRQQRQARVAQKKAHAAS 298
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: ETI32113.1 (hypothetical protein F443_20998 [Phytophthora parasitica P1569] >ETM37345.1 hypothetical protein L914_16091 [Phytophthora parasitica])

HSP 1 Score: 378.6 bits (971), Expect = 1.800e-101
Identity = 195/301 (64.78%), Postives = 235/301 (78.07%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKVLKNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+L  A+S EL RYGLKVGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFRC LD G++TTTTGNRVFG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H++E++  L E+D E     +A Y+K G+  DD E+++ KVH AIR DP PA K+  + D+ KYKR AK + ++R+ARVA+KKA  A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQASSAELPRYGLKVGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVEEVADEKRPFRCYLDCGLRTTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAIHISEHMKELEEDDPEMLASHYAEYVKAGIDPDDLEDLITKVHEAIRADPAPAAKKEHTFDK-KYKRAAKRSRQQRQARVAQKKAHAAS 298
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: ETL25956.1 (hypothetical protein L916_20260 [Phytophthora parasitica] >ETP01966.1 hypothetical protein F441_20865 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 378.6 bits (971), Expect = 1.800e-101
Identity = 195/301 (64.78%), Postives = 236/301 (78.41%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKVLKNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+L  A+S EL RYGLKVGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFRC LD G++TTTTGNRVFG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H++E++  L E+D E     +A Y+K G+  DD E+++ KVH AIR DP+PA K+  + D+ KYKR AK + ++R+ARVA+KKA  A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQASSAELPRYGLKVGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVEEVADEKRPFRCYLDCGLRTTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAIHISEHMKELEEDDPEMLASHYAEYVKAGIDPDDLEDLITKVHEAIRADPSPAAKKDHTFDK-KYKRAAKRSRQQRQARVAQKKAHAAS 298
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: ETO60855.1 (hypothetical protein F444_21002 [Phytophthora parasitica P1976])

HSP 1 Score: 378.3 bits (970), Expect = 2.400e-101
Identity = 195/301 (64.78%), Postives = 235/301 (78.07%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKVLKNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+L  A+S EL RYGLKVGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFRC LD G++TTTTGNRVFG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H++E++  L E+D E     +A Y+K G+  DD E+++ KVH AIR DP+PA K+  + D  KYKR AK + ++R+ARVA+KKA  A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQASSAELPRYGLKVGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVEEVADEKRPFRCYLDCGLRTTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAIHISEHMKELEEDDPEMLASHYAEYVKAGIDPDDLEDLITKVHEAIRADPSPAAKKEHTFDN-KYKRAAKRSRQQRQARVAQKKAHAAS 298
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: OQS03432.1 (60S ribosomal protein L5 [Thraustotheca clavata])

HSP 1 Score: 378.3 bits (970), Expect = 2.400e-101
Identity = 194/301 (64.45%), Postives = 237/301 (78.74%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            M FVKV KNK YFKRYQTK+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+LA+A S EL RYGLK G KNY AAYCTGLL+ RRLLNKLGLD  YEG  E DGE+  T  E NGRTYYV E+ DEK+PFR  LDVG+++TTTGNRVFG LKGA+D GLDIP +EKRFPGYDRD K YDA+ H+ERI GEH++ ++  L E+D E Y++ FA+YIK G++ D+ E++  +VH AIR +P  APK+A+  D+ K+K+ AK +  + KARVA+KKA  A+
Sbjct:    1 MSFVKVSKNKAYFKRYQTKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRVICQIAYAEIDGDKILASAYSDELKRYGLKCGYKNYPAAYCTGLLVGRRLLNKLGLDGDYEGNTEVDGEVVKT--EENGRTYYVAEVADEKRPFRAFLDVGLRSTTTGNRVFGALKGATDAGLDIPHNEKRFPGYDRDAKSYDAEVHRERIFGEHISNHMKELEEDDPEMYQKHFADYIKAGITADEMEDLYTEVHEAIRANPAAAPKKAFKVDK-KHKKPAKRSLAQFKARVAQKKAYAAS 298
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: ETK72498.1 (hypothetical protein L915_20400 [Phytophthora parasitica])

HSP 1 Score: 377.1 bits (967), Expect = 5.300e-101
Identity = 194/301 (64.45%), Postives = 235/301 (78.07%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKVLKNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+L  A+S EL RYGLKVGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFRC LD G++TTTTGNRVFG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H++E++  L E+D E     +A Y+K G+  DD E+++ KVH AIR DP+PA K+  + D+ KYKR AK + ++R+ RVA+KKA  A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQASSAELPRYGLKVGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVEEVADEKRPFRCYLDCGLRTTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAIHISEHMKELEEDDPEMLASHYAEYVKAGIDPDDLEDLITKVHEAIRADPSPAAKKDHTFDK-KYKRAAKRSRQQRQGRVAQKKAHAAS 298
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: XP_024584956.1 (60s ribosomal protein l5 [Plasmopara halstedii] >CEG48587.1 60s ribosomal protein l5 [Plasmopara halstedii])

HSP 1 Score: 376.7 bits (966), Expect = 7.000e-101
Identity = 194/301 (64.45%), Postives = 236/301 (78.41%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKVLKNK YFKRYQ KFRRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+LA A S EL RYGL VGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFRC LD G+++TTTGNRVFG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H+++++  L E+D E     +A Y+K G+  D+ E+++ KVH AIR DP+PAPK+  + D+ KYKR AK + ++R+ARVA+KKA  A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKKIICQIAYAEIDGDKILAQATSAELPRYGLSVGLKNYAAAYATGLLVGRRVLAKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVDEVADEKRPFRCYLDCGLRSTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAVHISDHMKELEEDDPEMLASHYAEYVKAGIEPDNLEDLITKVHEAIRADPSPAPKKDHTFDK-KYKRAAKRSRQQRQARVAQKKAHAAS 298
The following BLAST results are available for this feature:
BLAST of NO01G00360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002176750.13.700e-10263.84predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_008911988.11.400e-10164.78hypothetical protein PPTG_15526 [Phytophthora para... [more]
ETP30123.11.400e-10164.78hypothetical protein F442_20806 [Phytophthora para... [more]
KUF73670.11.400e-10164.7860S ribosomal protein L5 [Phytophthora nicotianae][more]
ETI32113.11.800e-10164.78hypothetical protein F443_20998 [Phytophthora para... [more]
ETL25956.11.800e-10164.78hypothetical protein L916_20260 [Phytophthora para... [more]
ETO60855.12.400e-10164.78hypothetical protein F444_21002 [Phytophthora para... [more]
OQS03432.12.400e-10164.4560S ribosomal protein L5 [Thraustotheca clavata][more]
ETK72498.15.300e-10164.45hypothetical protein L915_20400 [Phytophthora para... [more]
XP_024584956.17.000e-10164.4560s ribosomal protein l5 [Plasmopara halstedii] >C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00360.1NO01G00360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575852gene_11Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100308g2gene1654Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00360.1NO01G00360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00360 ID=NO01G00360|Name=NO01G00360|organism=Nannochloropsis oceanica|type=gene|length=3225bp
TTCTTGTATTGGTCCCCTCCCTGTGTGTGTGGTACGTGGCGTAGTGCGGG
ATGTGAGTATCTCGTAGAAGAACCAAAAGGCGGAAGGAGAGGGGAAACCT
AAGAGGGAGATCTCTTCTCAGCCATTGATTTTATCCAAAAACCAGTTTTA
AAACATGCCTTGACTAGTCTATGCCATTCTTCCTCCTCCTCCCCTTCTCA
CTCATGTTCTCAGTGCTCAATTTCCTTTCCTTTCCTTCCGGAGAACGCAA
GCTGTCCCAGCGCCGCCGTGCAGCTTCGCCTCGCCGCAACCCATGGCTCT
CGTGTGCTCCTTCCCTGCGTTTCTTTTTTGCGGGTAGGAGGCTTATATCT
GCATGCCTCATGCCTGTCTCGCCGAAGTAATTCTTCGAGTGGCAACGAAG
GGAGAGCGAGGAGGTGTTGGAGGATGTGGGGGGTGGCGGTGAATGGACGG
CTGCGCGCAGGCAAGCAACAGACAGTCTCAGCCTCCTCCCTCTCCTCTTT
CCATGCCTTTCCTCCACCGCACATATACTCTTACACATCCCTTGCTCACA
ATGAACACACACCAAACCTGCACACATACTCAATTCTGCCACTTATGGTC
AGGTTTCGTCCTCCCACGTCGTAACCATGgtaagtctcatctcttcattt
ctcattcactgcatcatcaccgacggccctcactcactcaactctccccg
ctaccttctcccgaatcctcacagCCTTTCGTCAAGGTTCTCAAGAACAA
GCAGTACTTCAAGCGGTACCAGACCAAGTTCCGTCGTCGCCGTGgtacgt
gggatggaaggaatagaggaagcagtggggtgggaggagggagagcgaag
tgcttgatgagagaggattgagaggacggaccatgagagttagctcggcg
ccagcacagttaagacgttgtcagaccatcctcttgtgatcctccttgct
ggtttgtagcctgtttgcgtggcctcaccgaagcatcacttcgtgtcgtc
tcatctccttgtccctccctccctttcccgacctcttagAGGGCAAAACG
GACTACCGTGCCCGCAAGCGCATGGTCGCCCAAGACAAGAACAAGTACAA
CACGCCGAAGTACCGCCTGGTGGTCCGCTTTACCAACCGGTACTGCATAG
CCCAGATCGTGTACGCCACCATTGAAGGCGACAAGGTTCTGGCCGCCGCC
AACTCCAAGGAGCTCGCCCGTTACGGCCTCAAAgtacggacatagcatac
cctcctttcctcatcccctccctcctttcctctttccccgcttatctact
ggtgacctctttccccaacttaaagtggtcttatctttccctattacagt
ctcacatatcctccccccctccactctctcttcccctttccatagGTGGG
CCTGAAGAACTACGCCGCTGCCTATTGCACGGGCCTCCTGATCGCCCGCC
GTCTGCTCAACAAGCTGGGCCTGGACGAGGCGTACGAGGGCGTGGAGGAG
gtacggagggaggaaaaggaggggagggagggaggagagggtgaagagga
aggactggaaggctccacaccgattggcctcatccgctaatcccctctct
ccttcctctcttcttcctaccttccctcgattttcagCCCGATGGTGAGA
TTCCCACGACTACGGACGAAAATAACGGCCGCACCTACTACGTGCCAGAG
CTCAACGACgtacgtgtctccacccttccctcttccctacctctctctgt
atctccttgtggatgtttctcgttcactacctaccccacggatgctctcc
tttttcctctccttcccgtcctggctccactcactcaccttcccgtccct
tattccctctctccctccctcccttccagGAGAAGAAGCCCTTCCGTTGC
ATTTTGGACGTCGGTATCCAGACCACCACCACCGGCAACCGCGTCTTTGG
TGTCCTCAAGgtacatttttcctgcccctccctccctccccccctccctt
cctcccattccattttcctcacggatcaccacccaaccgcacgccgctct
tgaatgttctgcagacacgccctatatcccccgatccctccctcccgctt
gtttcgctttcttctctgcgatcgctctcttctcccgccctccatccatt
cctccctccatccctccctccctccctatagGGCGCTTCGGACGGCGGCC
TGGACATTCCGCAGTCAGAGAAACGCTTCCCAGGCTATGACCGTGACGGG
AAGCGTTACGACGCGGACAGCCACAAGGAGCGCATCATGGGAGAGCACGT
AGCCGAGTACATCAATTATTTGGTGGAGGAAGACCACGAGGCGTATGAGA
GGCAGTTTGCGAACTACATCAAGgtgcgaagaagggctgctttttggtgc
ttcttcgccttttttttccctatcccgctttctctctacgcttatttaaa
gcgtatcgattggttgttgctgtcaagcatagatatgagtgggcagtagc
gtgcatctccagaaggaaagggagaaacaaaacaagaggagaggagacgt
ctgtccacaccctcacaccttcctcccctccttccctccctccctccctc
cctccccatccctccctcctcaagCACGGGGTGTCTGGCGACGACTACGA
AGAGGTGCTGGAGAAGGTCCATGCTGCCATTCGCGAGGACCCCACACCTG
CCCCCAAAGAGGCATGGAGTGGCGACCGTGCCAAGTACAAGCGACAGGCC
AAGgtaggaggcaggatagaggaaggaaggcgcagggagggtagagggca
ggagggaggaacgacaaaaagcgtgtggagatggtatcaaggctgtgggc
gagtgagcgattagttctccacccgttgacgcttcaaccctccccctcca
ttctatgtttcccctgaggttcttccattcattcttcttttctattcgtt
cctcccctcccgcccacccactcccacagCTCACGTACGAGGAGCGTAAG
GCACGCGTGGCGGAGAAGAAGGCGGCCTTGGCGGCGGCTGCCGGGGCCGA
CGAGATGGAGGAAGATGACGAATAAAGCGGTGGCGGAGATAGGAAGGAGA
GCAGGGGGAGGTTGGTGGAAGTCGAAGACAGCGCACTCGTGATGCGTGGG
CAAAACGATGATCATGGCGGCAAACAGGATAGAAAAATCAGGAATGAGTC
ATGACAACCAAAAGATAGAGCTAGA
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protein sequence of NO01G00360.1

>NO01G00360.1-protein ID=NO01G00360.1-protein|Name=NO01G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYR
LVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYC
TGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEK
KPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKR
YDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEV
LEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALA
AAAGADEMEEDDE*
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