NO01G00360, NO01G00360 (gene) Nannochloropsis oceanica

Overview
NameNO01G00360
Unique NameNO01G00360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3225
Alignment locationchr1:83765..86989 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibosomal protein l5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:83765..86989 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:00080975S rRNA binding
GO:0005198structural molecule activity
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR025607Rbsml_L5e/L18P_C
IPR005485Rbsml_L5_euk/L18_arc
Homology
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: XP_005854216.1 (large subunit ribosomal protein L5e [Nannochloropsis gaditana CCMP526] >EKU22141.1 large subunit ribosomal protein L5e [Nannochloropsis gaditana CCMP526] >EWM28957.1 ribosomal protein l5 [Nannochloropsis gaditana])

HSP 1 Score: 552.4 bits (1422), Expect = 9.300e-154
Identity = 275/296 (92.91%), Postives = 285/296 (96.28%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKK 297
            MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATI+GDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGV+EPDGEI TT DE NGRTYYVPELNDEKKPFR ILDVGIQTTTTGNR+FGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVA+YINYLVEEDHEAYERQFANYIKHGVSGDDY+++LE+VH AIREDPT APK  W GDR KYKRQ KL+YEERK+RVAEKK
Sbjct:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKK 296
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: XP_009830190.1 (hypothetical protein H257_06606 [Aphanomyces astaci] >ETV80266.1 hypothetical protein H257_06606 [Aphanomyces astaci])

HSP 1 Score: 391.0 bits (1003), Expect = 3.600e-105
Identity = 204/305 (66.89%), Postives = 238/305 (78.03%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAAAAGA 306
            MPFVKV KNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  IAQI YA I+GDK+L +A S EL RYGLK G KNYAAAY TGLL+ RRLLNKLGLD  YEG  E DG +  T  E NGRTYYV E+ DEK+PFR  LDVG++TT+TGNRVFG LKGA+D GLDIP SEKRFPGYDRD K YDAD HKERI GEH+A ++  L E+D E +++ FA+YIK G+  DD EE+   VH AIREDPTPAPK+A++ D  K+K  AK + ++RKARV +KKA  A  A A
Sbjct:    1 MPFVKVSKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRVIAQIAYAEIDGDKILTSAYSDELKRYGLKAGFKNYAAAYATGLLVGRRLLNKLGLDGDYEGNTEVDGTVVKT--EANGRTYYVAEVADEKRPFRAFLDVGLRTTSTGNRVFGALKGATDAGLDIPHSEKRFPGYDRDAKSYDADVHKERIFGEHIANHMKELEEDDPEMFQKHFAHYIKAGLGSDDIEEMYTAVHEAIREDPTPAPKKAYTPD-LKFKNTAKRSLQQRKARVVQKKAHHAKLAKA 302
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: GAX14492.1 (large subunit ribosomal protein L5e [Fistulifera solaris])

HSP 1 Score: 387.9 bits (995), Expect = 3.000e-104
Identity = 198/307 (64.50%), Postives = 243/307 (79.15%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAAAAGADE 308
            MPFV+  K K YF RYQ KFRRRREGKTDYR RKR+V QDKNKY +PKYRLVVRFTN+  I QIVY+ I+GD+VLA A SKELARYGL VGLKNYAAAYCTGLL+ARR+L KLGLD+ YEG  E DG+I +T  E + + YYV E++D+KKPFRC LDVG +TT+TG R+FG LKGA+DGGLDIP SEKRFPGYDRD K YDAD H+ERI G HV+EY+ YL EED+  Y+  F +++++ ++GD  EE+ E VH  IREDP+P+ K+ ++ D++ YKR++KLT++ERKARV  KK A  A   ADE
Sbjct:    1 MPFVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDDVYEGNTEVDGQIVST--EYDNKKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKS-YKRKSKLTHDERKARVQAKKDAKKAELAADE 304
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: GAX09964.1 (large subunit ribosomal protein L5e [Fistulifera solaris])

HSP 1 Score: 387.5 bits (994), Expect = 3.900e-104
Identity = 198/307 (64.50%), Postives = 243/307 (79.15%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAAAAGADE 308
            MPFV+  K K YF RYQ KFRRRREGKTDYR RKR+V QDKNKY +PKYRLVVRFTN+  I QIVY+ I+GD+VLA A SKELARYGL VGLKNYAAAYCTGLL+ARR+L KLGLD+ YEG  E DG+I +T  +N  + YYV E++D+KKPFRC LDVG +TT+TG R+FG LKGA+DGGLDIP SEKRFPGYDRD K YDAD H+ERI G HV+EY+ YL EED+  Y+  F +++++ ++GD  EE+ E VH  IREDP+P+ K+ ++ D++ YKR++KLT++ERKARV  KK A  A   ADE
Sbjct:    1 MPFVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDDVYEGNTEVDGQIVSTDYDN--KKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKS-YKRKSKLTHDERKARVQAKKDAKKAELAADE 304
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: OQR97335.1 (60S ribosomal protein L5 [Achlya hypogyna])

HSP 1 Score: 387.1 bits (993), Expect = 5.200e-104
Identity = 198/300 (66.00%), Postives = 238/300 (79.33%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALA 301
            M FVKV K+K YFKRYQTK+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+LA+A S EL RYGLK G KNY AAYCTGLL+ RRLLNKLGLD  YEG  E DGE+  T  E+NGRTYYV E+ DEK+PFR  LDVG+++T+TGNRVFG LKGA+D GLDIP SEKRFPGYDRD K YDA+ HKERI GEH++ ++  L E+D E Y++ FA+YIK G++ DD E++   VH AIREDPTPA K+ +  D  K+K+QAK + ++ KARVA+KKA  A
Sbjct:    1 MAFVKVNKSKAYFKRYQTKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRVICQIAYAEIDGDKILASAYSDELKRYGLKAGFKNYPAAYCTGLLVGRRLLNKLGLDGEYEGNTEIDGEVVKT--ESNGRTYYVAEVADEKRPFRAFLDVGLRSTSTGNRVFGALKGATDAGLDIPHSEKRFPGYDRDAKSYDAEVHKERIFGEHISNHMKELEEDDPEMYQKHFADYIKAGITSDDMEDLYTSVHEAIREDPTPAAKKPFKAD-PKFKKQAKRSLQQFKARVAQKKAHAA 297
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: XP_008861011.1 (hypothetical protein H310_00139 [Aphanomyces invadans] >ETW09600.1 hypothetical protein H310_00139 [Aphanomyces invadans])

HSP 1 Score: 386.0 bits (990), Expect = 1.100e-103
Identity = 202/305 (66.23%), Postives = 237/305 (77.70%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAAAAGA 306
            MPFVKV KNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+L +A S EL RYGLK G KNYAAAY TGLL+ RRLLNKLGLD  YEG  E DG +  T  E NGRTYYV E+ DEK+PFR  LDVG++TT+TGNRVFG LKGA+D GLDIP SEKRFPGYDRD K YDAD HKERI GEH+A ++  L E+D E +++ FA+Y+K G+  DD EE+   VH AIR DPT APK+A++ D  KYK +AK + ++RKARVA+KKA  A  A A
Sbjct:    1 MPFVKVSKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRIITQIAYAEIDGDKILCSAYSDELKRYGLKAGFKNYAAAYATGLLVGRRLLNKLGLDGDYEGNTEIDGTVVKT--EANGRTYYVAEVADEKRPFRAFLDVGLRTTSTGNRVFGALKGATDAGLDIPHSEKRFPGYDRDAKSYDADVHKERIFGEHIANHMKELEEDDPEMFQKHFAHYVKAGLGPDDIEEMYTAVHEAIRADPTAAPKKAFTPD-LKYKNKAKRSLQQRKARVAQKKAHHAKLAQA 302
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: XP_012204585.1 (hypothetical protein SPRG_10239 [Saprolegnia parasitica CBS 223.65] >KDO24705.1 hypothetical protein SPRG_10239 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 385.2 bits (988), Expect = 2.000e-103
Identity = 198/300 (66.00%), Postives = 236/300 (78.67%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALA 301
            M FVKV K+K YFKRYQTK+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+LA+A S EL RYGLK G KNY AAYCTGLL+ RRLLNKLGLD  YEG  E DGE+  T  E NGRTYYV E+ DEK+PFR  LDVG+++T+TGNRVFG LKGA+D GLDIP SEKRFPGYDRD K YDA+ HKERI G+H++ ++  L E+D E Y++ FA+YIK G++ DD E++   VH AIREDPTPA K+ +  D  KYK+QAK +  + KARVA+KKA  A
Sbjct:    1 MAFVKVNKSKAYFKRYQTKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRVICQIAYAEIDGDKILASAYSDELKRYGLKCGFKNYPAAYCTGLLVGRRLLNKLGLDGDYEGNTEVDGEVVKT--EANGRTYYVAEVADEKRPFRAFLDVGLRSTSTGNRVFGALKGATDAGLDIPHSEKRFPGYDRDAKSYDAEVHKERIFGDHISNHMKELEEDDPEMYQKHFADYIKAGITSDDMEDLYASVHEAIREDPTPAEKKPFKAD-PKYKKQAKRSLSQFKARVAQKKAHAA 297
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: GAX99715.1 (Hypothetical protein PINS_007591 [Pythium insidiosum])

HSP 1 Score: 382.1 bits (980), Expect = 1.700e-102
Identity = 194/301 (64.45%), Postives = 239/301 (79.40%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKV KNK YFKR+Q K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+LAAA S EL RYG  +GLKNYAAAY TGLL+ RR+L KLGLDE YEG  E  GE   T  E NGRTYYV E+ DEK+PFRC LDVG++TTTTG+RVFG LKGA+D GLDIP +EKRFPGY+RD K YDA+ H++RIMG H+ +++  L E+D +     +A Y + G+SGDD EE++EKVH AIREDP+PAPK+ ++ D+ KYK+Q K + ++R+ARVA+KKA  A+
Sbjct:    1 MPFVKVTKNKAYFKRFQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILAAAYSSELPRYGFTLGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVTGEFVKT--EANGRTYYVEEVADEKRPFRCYLDVGLRTTTTGHRVFGALKGAADAGLDIPHTEKRFPGYNRDDKSYDAEVHRDRIMGVHIGDHMKELEEDDPDMLASHYAKYTEAGISGDDIEEIVEKVHEAIREDPSPAPKKEFAVDK-KYKKQVKRSRQQRQARVAQKKAYAAS 298
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: XP_008605837.1 (50S ribosomal protein L5e [Saprolegnia diclina VS20] >EQC40993.1 50S ribosomal protein L5e [Saprolegnia diclina VS20])

HSP 1 Score: 381.7 bits (979), Expect = 2.200e-102
Identity = 197/300 (65.67%), Postives = 234/300 (78.00%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALA 301
            M FVKV K+K YFKRYQTK+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+LAAA S EL RYGLK G KNY AAYCTGLL+ RRLLNKLGLD  YEG  E DGE+  T  E NGRTYYV E+ DEK+PFR  LDVG+++T+TGNRVFG LKGA+D GLDIP SEKRFPGYDRD K YDA+ HKERI G+H++ ++  L E+D E Y++ FA+YIK G++ DD E++   VH AIREDPTPA K+ +  D  KYK+  K +  + KARVA+KKA  A
Sbjct:    1 MTFVKVNKSKAYFKRYQTKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRVICQIAYAEIDGDKILAAAYSDELKRYGLKCGFKNYPAAYCTGLLVGRRLLNKLGLDGDYEGNTEVDGEVVKT--EANGRTYYVAEVADEKRPFRAFLDVGLRSTSTGNRVFGALKGATDAGLDIPHSEKRFPGYDRDAKSYDAEVHKERIFGDHISNHMKELEEDDPEMYQKHFADYIKAGITSDDMEDLYAAVHEAIREDPTPAEKKPYKKD-PKYKKAVKRSLSQFKARVAQKKAHAA 297
[Close]
BLAST of NO01G00360 vs. NCBI_GenBank
Match: GAX99711.1 (Hypothetical protein PINS_007590 [Pythium insidiosum])

HSP 1 Score: 381.7 bits (979), Expect = 2.200e-102
Identity = 194/301 (64.45%), Postives = 239/301 (79.40%), Query Frame = 0 
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEKKPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEVLEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALAA 302
            MPFVKV KNK YFKR+Q K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA I+GDK+LAAA S EL RYG  +GLKNYAAAY TGLL+ RR+L KLGLDE YEG  E  GE   T  E NGRTYYV E+ DEK+PFRC LDVG++TTTTG+RVFG LKGA+D GLDIP +EKRFPGY+RD K YDA+ H++RIMG H+ +++  L E+D +     +A Y + G+SGDD EE++EKVH AIREDP+PAPK+ ++ D+ KYK+Q K + ++R+ARVA+KKA  A+
Sbjct:    1 MPFVKVTKNKAYFKRFQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILAAAYSSELPRYGFTLGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVTGEXVKT--EANGRTYYVEEVADEKRPFRCYLDVGLRTTTTGHRVFGALKGAADAGLDIPHTEKRFPGYNRDDKSYDAEVHRDRIMGVHIGDHMKELEEDDPDMLASHYAKYTEAGISGDDIEEIVEKVHEAIREDPSPAPKKEFAVDK-KYKKQVKRSRQQRQARVAQKKAYAAS 298
The following BLAST results are available for this feature:
BLAST of NO01G00360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854216.19.300e-15492.91large subunit ribosomal protein L5e [Nannochlorops... [more]
XP_009830190.13.600e-10566.89hypothetical protein H257_06606 [Aphanomyces astac... [more]
GAX14492.13.000e-10464.50large subunit ribosomal protein L5e [Fistulifera s... [more]
GAX09964.13.900e-10464.50large subunit ribosomal protein L5e [Fistulifera s... [more]
OQR97335.15.200e-10466.0060S ribosomal protein L5 [Achlya hypogyna][more]
XP_008861011.11.100e-10366.23hypothetical protein H310_00139 [Aphanomyces invad... [more]
XP_012204585.12.000e-10366.00hypothetical protein SPRG_10239 [Saprolegnia paras... [more]
GAX99715.11.700e-10264.45Hypothetical protein PINS_007591 [Pythium insidios... [more]
XP_008605837.12.200e-10265.6750S ribosomal protein L5e [Saprolegnia diclina VS2... [more]
GAX99711.12.200e-10264.45Hypothetical protein PINS_007590 [Pythium insidios... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00360.1NO01G00360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575852gene_11Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100308g2gene1654Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00360.1NO01G00360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00360 ID=NO01G00360|Name=NO01G00360|organism=Nannochloropsis oceanica|type=gene|length=3225bp
TTCTTGTATTGGTCCCCTCCCTGTGTGTGTGGTACGTGGCGTAGTGCGGG
ATGTGAGTATCTCGTAGAAGAACCAAAAGGCGGAAGGAGAGGGGAAACCT
AAGAGGGAGATCTCTTCTCAGCCATTGATTTTATCCAAAAACCAGTTTTA
AAACATGCCTTGACTAGTCTATGCCATTCTTCCTCCTCCTCCCCTTCTCA
CTCATGTTCTCAGTGCTCAATTTCCTTTCCTTTCCTTCCGGAGAACGCAA
GCTGTCCCAGCGCCGCCGTGCAGCTTCGCCTCGCCGCAACCCATGGCTCT
CGTGTGCTCCTTCCCTGCGTTTCTTTTTTGCGGGTAGGAGGCTTATATCT
GCATGCCTCATGCCTGTCTCGCCGAAGTAATTCTTCGAGTGGCAACGAAG
GGAGAGCGAGGAGGTGTTGGAGGATGTGGGGGGTGGCGGTGAATGGACGG
CTGCGCGCAGGCAAGCAACAGACAGTCTCAGCCTCCTCCCTCTCCTCTTT
CCATGCCTTTCCTCCACCGCACATATACTCTTACACATCCCTTGCTCACA
ATGAACACACACCAAACCTGCACACATACTCAATTCTGCCACTTATGGTC
AGGTTTCGTCCTCCCACGTCGTAACCATGgtaagtctcatctcttcattt
ctcattcactgcatcatcaccgacggccctcactcactcaactctccccg
ctaccttctcccgaatcctcacagCCTTTCGTCAAGGTTCTCAAGAACAA
GCAGTACTTCAAGCGGTACCAGACCAAGTTCCGTCGTCGCCGTGgtacgt
gggatggaaggaatagaggaagcagtggggtgggaggagggagagcgaag
tgcttgatgagagaggattgagaggacggaccatgagagttagctcggcg
ccagcacagttaagacgttgtcagaccatcctcttgtgatcctccttgct
ggtttgtagcctgtttgcgtggcctcaccgaagcatcacttcgtgtcgtc
tcatctccttgtccctccctccctttcccgacctcttagAGGGCAAAACG
GACTACCGTGCCCGCAAGCGCATGGTCGCCCAAGACAAGAACAAGTACAA
CACGCCGAAGTACCGCCTGGTGGTCCGCTTTACCAACCGGTACTGCATAG
CCCAGATCGTGTACGCCACCATTGAAGGCGACAAGGTTCTGGCCGCCGCC
AACTCCAAGGAGCTCGCCCGTTACGGCCTCAAAgtacggacatagcatac
cctcctttcctcatcccctccctcctttcctctttccccgcttatctact
ggtgacctctttccccaacttaaagtggtcttatctttccctattacagt
ctcacatatcctccccccctccactctctcttcccctttccatagGTGGG
CCTGAAGAACTACGCCGCTGCCTATTGCACGGGCCTCCTGATCGCCCGCC
GTCTGCTCAACAAGCTGGGCCTGGACGAGGCGTACGAGGGCGTGGAGGAG
gtacggagggaggaaaaggaggggagggagggaggagagggtgaagagga
aggactggaaggctccacaccgattggcctcatccgctaatcccctctct
ccttcctctcttcttcctaccttccctcgattttcagCCCGATGGTGAGA
TTCCCACGACTACGGACGAAAATAACGGCCGCACCTACTACGTGCCAGAG
CTCAACGACgtacgtgtctccacccttccctcttccctacctctctctgt
atctccttgtggatgtttctcgttcactacctaccccacggatgctctcc
tttttcctctccttcccgtcctggctccactcactcaccttcccgtccct
tattccctctctccctccctcccttccagGAGAAGAAGCCCTTCCGTTGC
ATTTTGGACGTCGGTATCCAGACCACCACCACCGGCAACCGCGTCTTTGG
TGTCCTCAAGgtacatttttcctgcccctccctccctccccccctccctt
cctcccattccattttcctcacggatcaccacccaaccgcacgccgctct
tgaatgttctgcagacacgccctatatcccccgatccctccctcccgctt
gtttcgctttcttctctgcgatcgctctcttctcccgccctccatccatt
cctccctccatccctccctccctccctatagGGCGCTTCGGACGGCGGCC
TGGACATTCCGCAGTCAGAGAAACGCTTCCCAGGCTATGACCGTGACGGG
AAGCGTTACGACGCGGACAGCCACAAGGAGCGCATCATGGGAGAGCACGT
AGCCGAGTACATCAATTATTTGGTGGAGGAAGACCACGAGGCGTATGAGA
GGCAGTTTGCGAACTACATCAAGgtgcgaagaagggctgctttttggtgc
ttcttcgccttttttttccctatcccgctttctctctacgcttatttaaa
gcgtatcgattggttgttgctgtcaagcatagatatgagtgggcagtagc
gtgcatctccagaaggaaagggagaaacaaaacaagaggagaggagacgt
ctgtccacaccctcacaccttcctcccctccttccctccctccctccctc
cctccccatccctccctcctcaagCACGGGGTGTCTGGCGACGACTACGA
AGAGGTGCTGGAGAAGGTCCATGCTGCCATTCGCGAGGACCCCACACCTG
CCCCCAAAGAGGCATGGAGTGGCGACCGTGCCAAGTACAAGCGACAGGCC
AAGgtaggaggcaggatagaggaaggaaggcgcagggagggtagagggca
ggagggaggaacgacaaaaagcgtgtggagatggtatcaaggctgtgggc
gagtgagcgattagttctccacccgttgacgcttcaaccctccccctcca
ttctatgtttcccctgaggttcttccattcattcttcttttctattcgtt
cctcccctcccgcccacccactcccacagCTCACGTACGAGGAGCGTAAG
GCACGCGTGGCGGAGAAGAAGGCGGCCTTGGCGGCGGCTGCCGGGGCCGA
CGAGATGGAGGAAGATGACGAATAAAGCGGTGGCGGAGATAGGAAGGAGA
GCAGGGGGAGGTTGGTGGAAGTCGAAGACAGCGCACTCGTGATGCGTGGG
CAAAACGATGATCATGGCGGCAAACAGGATAGAAAAATCAGGAATGAGTC
ATGACAACCAAAAGATAGAGCTAGA
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protein sequence of NO01G00360.1

>NO01G00360.1-protein ID=NO01G00360.1-protein|Name=NO01G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYR
LVVRFTNRYCIAQIVYATIEGDKVLAAANSKELARYGLKVGLKNYAAAYC
TGLLIARRLLNKLGLDEAYEGVEEPDGEIPTTTDENNGRTYYVPELNDEK
KPFRCILDVGIQTTTTGNRVFGVLKGASDGGLDIPQSEKRFPGYDRDGKR
YDADSHKERIMGEHVAEYINYLVEEDHEAYERQFANYIKHGVSGDDYEEV
LEKVHAAIREDPTPAPKEAWSGDRAKYKRQAKLTYEERKARVAEKKAALA
AAAGADEMEEDDE*
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