NO01G00130, NO01G00130 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G00130
Unique Name	NO01G00130
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1653
Alignment location	chr1:21009..22661 -

Link to JBrowse

Properties


Property Name	Value
Description	Unknown protein

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:21009..22661 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

Homology

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: EWM28943.1 (hypothetical protein Naga_100347g2 [Nannochloropsis gaditana])

HSP 1 Score: 669.8 bits (1727), Expect = 7.000e-189
Identity = 387/550 (70.36%), Postives = 427/550 (77.64%), Query Frame = 0

Query:    1 MFEGGVRSAMQEANRVAAKGQRRKRVXXXXXXXXXXXXXXXXXXXXVKEGLVTLQMMFEGTGLKGGLDVLAGPLGETSEDLASWERDREGAGEKEGAVLQSXXXXXXXXXXXXXXXXSLGVTGEADPFGDVGWDVAARFDLLVRELEATVDSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAXXXXXXXXXXXXRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQMVDHFESRVNDLTEAELALAGKVLEVEDILEEVHPDSSLLALLQTKEGGLGLEAYKMGAETLLHDPREWDDSALAGREDELFSPEYLAAKYDRILKHYGFTASGQEGRGMGNVGEDEEKEGKEDIEQERILGEGSAGAXXXXXXXXXPANLAKTVAGKGGEKEEEVEETGGSGSILEALQEEGVL 551
            MFE G+RSA QEA+RVAAKGQR+K++                    VKEGL TL+MMFEGTGLKGG+DV+AGP GE S DL SWER  E A  + G     XXXXXXXXXXXXXXXX LG  G+ADP GD+GWDVAARFD+LVRELEATVDSPDLLP IASQYHNVFLSRHFLGLMRARLEACEA              G G   VTAATPVVLARMV FAEQ+VVQVQEMGQLYELQQLDKIKAICAVAEEDM +LSEYVSSRK++LDEDFVRYLQYL+EAEK+RL+GAGV RPEREPSNWLMILEIVKKGVYHE+GKAVRDDVSMVHFITRF+EADEREHL RAH+ARLAPSQVIPFKRVV QMVDHFESRVN+L+EAEL+LAG+VLEVED+LEE+HPDSSLLALLQ+KEGG+GLEAYK GAETLLHDPREWDDSA+AG+EDELFSPEYLAAKYDRILKHYGF+                        + E ILG  +                 KT +G   EKEE    + G+ SI EAL+EEG+L
Sbjct:  436 MFESGLRSAKQEADRVAAKGQRQKQMLAVVKEVAETRQREVGGKGGVKEGLATLEMMFEGTGLKGGVDVMAGPPGEESLDLRSWERGAEEA--RVGREGXXXXXXXXXXXXXXXXXXXLGSMGDADPLGDLGWDVAARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEED-------GEG---VTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETLLHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFSXXXXXXXXXXXXXXXXXXXXXGIGDIEGILGGNADTRGALPAALEAWVGTEKTESGPKEEKEEHGVLSVGAASIEEALREEGLL 973

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: XP_005854282.1 (cs-domain containing conserved in apicomplexa, partial [Nannochloropsis gaditana CCMP526] >EKU22079.1 cs-domain containing conserved in apicomplexa, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 505.8 bits (1301), Expect = 1.700e-139
Identity = 258/303 (85.15%), Postives = 279/303 (92.08%), Query Frame = 0

Query:  164 HNVFLSRHFLGLMRARLEACEAXXXXXXXXXXXXRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQMVDHFESRVNDLTEAELALAGKVLEVEDILEEVHPDSSLLALLQTKEGGLGLEAYKMGAETLLHDPREWDDSALAGREDELFSPEYLAAKYDRILKHYGFT 467
            HNVFLSRHFLGLMRARLEACEA              G G   VTAATPVVLARMV FAEQ+VVQVQEMGQLYELQQLDKIKAICAVAEEDM +LSEYVSSRK++LDEDFVRYLQYL+EAEK+RL+GAGV RPEREPSNWLMILEIVKKGVYHE+GKAVRDDVSMVHFITRF+EADEREHL RAH+ARLAPSQVIPFKRVV QMVDHFESRVN+L+EAEL+LAG+VLEVED+LEE+HPDSSLLALLQ+KEGG+GLEAYK GAETLLHDPREWDDSA+AG+EDELFSPEYLAAKYDRILKHYGF+
Sbjct:    1 HNVFLSRHFLGLMRARLEACEAAMAGEED-------GEG---VTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETLLHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFS 293

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: CBJ26974.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 108.6 bits (270), Expect = 6.200e-20
Identity = 71/215 (33.02%), Postives = 115/215 (53.49%), Query Frame = 0

Query:  198 RWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQMVDHFESRVNDLTEAELALAGKVLEVEDILEEVHPDSSLLALLQTKE 413
            R GV  S       ++ A     A   V Q+ +M Q  E+QQL+KI+ IC  A EDM  L + +   K  LD+ FV Y+ Y ++ E+  +   G+  P+REPS WL +L +++KGV  E+ K+V  DV ++  + R +E +ER  L    I+ L    +  FKR  T +VD++E+  ++  + +  L   VLE+ + L+ +  +  +  L  TKE
Sbjct:  345 RGGVDESSREERDAMIAANQA--AVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAVDKRGL-NPDREPSRWLQVLGVIQKGVMAELQKSVHQDVELISHVLRMKEPEERLALLNITISTLPSMYIRGFKRTATNIVDYYEAMGDNCMDQD--LRSMVLEIGENLKVLMSEERMAVL--TKE 552

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: PFH31592.1 (hypothetical protein BESB_025660 [Besnoitia besnoiti])

HSP 1 Score: 99.0 bits (245), Expect = 4.900e-17
Identity = 68/232 (29.31%), Postives = 107/232 (46.12%), Query Frame = 0

Query:  137 ARFDLLVRELEATVDSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAXXXXXXXXXXXXRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQMVD 369
            AR D+LV EL    D   + P I  QY ++ +   FL LM+  +                      R   T     +L  +  F   L   V+ +    E +QL+KI+ +C  A  D+ KL+EY  S K  L+ DF+ YL++ + AE+ R++  G   P+  PS WLM+L I+ KGV     K + +DV  +  +   +  + R  L    +A++  +    FKRV  +M D
Sbjct: 1243 ARLDMLVYELMEATDE-GVFPVICDQYKDLLMDEQFLLLMKLHIRE--------------------RPPRTRKEKDILVVINKFVVSLYEDVEALAVQNEKEQLEKIRLLCMQALVDVEKLTEYAESMKQLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSRWLMVLMIIHKGVMAIYEKEIWEDVLWITMVVTQKPPEVRRKLLELFVAQIPKADWKQFKRVALRMAD 1452

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: EPR57457.1 (hypothetical protein TGGT1_305020 [Toxoplasma gondii GT1])

HSP 1 Score: 98.6 bits (244), Expect = 6.400e-17
Identity = 65/230 (28.26%), Postives = 108/230 (46.96%), Query Frame = 0

Query:  137 ARFDLLVRELEATVDSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAXXXXXXXXXXXXRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQM 367
            AR D+L+ EL    D   + P I  QY ++ +  HFL +M+ R++                     R   +     +   +  F   L   V+ +    E +QL KI+ +C  A  D+ KL+EY  S K  L+ DF+ YL++ + AE+ R++  G   P+  PS WLM+L I+ KGV     K + +DV  +  +   ++ + R  L    +A++  +    FKRV  +M
Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQE--------------------RPPRSRREKDIFVIINKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: XP_018636123.1 (hypothetical protein TGME49_305020 [Toxoplasma gondii ME49] >EPT27356.1 hypothetical protein TGME49_305020 [Toxoplasma gondii ME49] >ESS29025.1 CS domain protein [Toxoplasma gondii VEG] >CEL76177.1 TPA: hypothetical protein BN1205_106340 [Toxoplasma gondii VEG])

HSP 1 Score: 98.6 bits (244), Expect = 6.400e-17
Identity = 65/230 (28.26%), Postives = 108/230 (46.96%), Query Frame = 0

Query:  137 ARFDLLVRELEATVDSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAXXXXXXXXXXXXRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQM 367
            AR D+L+ EL    D   + P I  QY ++ +  HFL +M+ R++                     R   +     +   +  F   L   V+ +    E +QL KI+ +C  A  D+ KL+EY  S K  L+ DF+ YL++ + AE+ R++  G   P+  PS WLM+L I+ KGV     K + +DV  +  +   ++ + R  L    +A++  +    FKRV  +M
Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQE--------------------RPPRSRREKDIFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: KFG28423.1 (CS domain protein [Toxoplasma gondii p89])

HSP 1 Score: 98.6 bits (244), Expect = 6.400e-17
Identity = 65/230 (28.26%), Postives = 108/230 (46.96%), Query Frame = 0

Query:  137 ARFDLLVRELEATVDSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAXXXXXXXXXXXXRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQM 367
            AR D+L+ EL    D   + P I  QY ++ +  HFL +M+ R++                     R   +     +   +  F   L   V+ +    E +QL KI+ +C  A  D+ KL+EY  S K  L+ DF+ YL++ + AE+ R++  G   P+  PS WLM+L I+ KGV     K + +DV  +  +   ++ + R  L    +A++  +    FKRV  +M
Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQE--------------------RPPRSRREKDIFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: KFH02535.1 (CS domain protein [Toxoplasma gondii VAND])

HSP 1 Score: 98.6 bits (244), Expect = 6.400e-17
Identity = 65/230 (28.26%), Postives = 108/230 (46.96%), Query Frame = 0

Query:  137 ARFDLLVRELEATVDSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAXXXXXXXXXXXXRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQM 367
            AR D+L+ EL    D   + P I  QY ++ +  HFL +M+ R++                     R   +     +   +  F   L   V+ +    E +QL KI+ +C  A  D+ KL+EY  S K  L+ DF+ YL++ + AE+ R++  G   P+  PS WLM+L I+ KGV     K + +DV  +  +   ++ + R  L    +A++  +    FKRV  +M
Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQE--------------------RPPRSRREKDIFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: KFH06978.1 (CS domain protein [Toxoplasma gondii MAS] >PUA85956.1 CS domain protein [Toxoplasma gondii TgCATBr9])

HSP 1 Score: 98.6 bits (244), Expect = 6.400e-17
Identity = 65/230 (28.26%), Postives = 108/230 (46.96%), Query Frame = 0

Query:  137 ARFDLLVRELEATVDSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAXXXXXXXXXXXXRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQM 367
            AR D+L+ EL    D   + P I  QY ++ +  HFL +M+ R++                     R   +     +   +  F   L   V+ +    E +QL KI+ +C  A  D+ KL+EY  S K  L+ DF+ YL++ + AE+ R++  G   P+  PS WLM+L I+ KGV     K + +DV  +  +   ++ + R  L    +A++  +    FKRV  +M
Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQE--------------------RPPRSRREKDIFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447

[Close]

BLAST of NO01G00130 vs. NCBI_GenBank
Match: KYF44824.1 (CS domain protein [Toxoplasma gondii ARI])

HSP 1 Score: 98.6 bits (244), Expect = 6.400e-17
Identity = 65/230 (28.26%), Postives = 108/230 (46.96%), Query Frame = 0

Query:  137 ARFDLLVRELEATVDSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAXXXXXXXXXXXXRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQM 367
            AR D+L+ EL    D   + P I  QY ++ +  HFL +M+ R++                     R   +     +   +  F   L   V+ +    E +QL KI+ +C  A  D+ KL+EY  S K  L+ DF+ YL++ + AE+ R++  G   P+  PS WLM+L I+ KGV     K + +DV  +  +   ++ + R  L    +A++  +    FKRV  +M
Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQE--------------------RPPRSRREKDIFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447

The following BLAST results are available for this feature:

BLAST of NO01G00130 vs. NCBI_GenBank

BLAST of NO01G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28943.1	7.000e-189	70.36	hypothetical protein Naga_100347g2 [Nannochloropsi...	[more]
XP_005854282.1	1.700e-139	85.15	cs-domain containing conserved in apicomplexa, par...	[more]
CBJ26974.1	6.200e-20	33.02	conserved unknown protein [Ectocarpus siliculosus]	[more]
PFH31592.1	4.900e-17	29.31	hypothetical protein BESB_025660 [Besnoitia besnoi...	[more]
EPR57457.1	6.400e-17	28.26	hypothetical protein TGGT1_305020 [Toxoplasma gond...	[more]
XP_018636123.1	6.400e-17	28.26	hypothetical protein TGME49_305020 [Toxoplasma gon...	[more]
KFG28423.1	6.400e-17	28.26	CS domain protein [Toxoplasma gondii p89]	[more]
KFH02535.1	6.400e-17	28.26	CS domain protein [Toxoplasma gondii VAND]	[more]
KFH06978.1	6.400e-17	28.26	CS domain protein [Toxoplasma gondii MAS] >PUA8595...	[more]
KYF44824.1	6.400e-17	28.26	CS domain protein [Toxoplasma gondii ARI]	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL007	nonsL007	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR042	ncniR042	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK009793	NSK009793	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G00130.1	NO01G00130.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|621403	gene_12346	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100347g2	gene1670	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G00130.1	NO01G00130.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO01G00130 ID=NO01G00130|Name=NO01G00130|organism=Nannochloropsis oceanica|type=gene|length=1653bp
ATGTTCGAAGGAGGGGTGCGGAGTGCCATGCAAGAGGCGAACCGAGTGGC
AGCCAAGGGGCAGCGGCGGAAGCGAGTGCTGGCGGCCGTCAAGGAGGTGG
CTCAGAGCAAAGAGAAGGAAGAGGAGGGAGGCGGAGGAGTGAAGGAGGGG
TTGGTGACGCTGCAGATGATGTTTGAGGGCACGGGGCTGAAGGGTGGCCT
GGACGTGCTGGCAGGACCACTGGGGGAGACGAGTGAGGACTTAGCGTCGT
GGGAGAGGGACAGGGAGGGAGCGGGTGAGAAGGAAGGCGCGGTGCTCCAG
AGCTTGGAGGAGGAGGAGGAGGAGGAAGACGATGAAGACGAGTGGGACGA
GTCGCTGGGGGTCACGGGCGAGGCAGACCCTTTCGGTGACGTGGGGTGGG
ACGTGGCGGCGCGGTTTGACCTGCTGGTGCGGGAGCTGGAGGCGACAGTG
GACTCGCCCGACCTACTGCCGGGCATAGCTAGCCAGTACCACAACGTCTT
CCTAAGCCGTCACTTCCTTGGGCTGATGAGAGCCAGGCTGGAGGCGTGCG
AAGCGGCAGCAGGAGGCGAGGAGGAGGAGGAGGAGGGAGGCAGGTGGGGT
GTTGGTCGGAGCGAGGTGACGGCGGCGACGCCTGTGGTGCTGGCGCGCAT
GGTGAGTTTCGCGGAGCAGTTGGTAGTGCAGGTGCAGGAGATGGGCCAGC
TGTACGAGCTGCAGCAGCTGGACAAGATCAAGGCCATCTGTGCCGTGGCG
GAGGAGGACATGAGCAAGCTCTCGGAGTACGTCTCGAGCCGCAAGGACGA
GCTCGACGAGGACTTCGTGCGGTACCTGCAGTACCTGCTCGAGGCGGAAA
AGGTGCGGCTGAAGGGGGCGGGTGTGGCGCGGCCGGAGCGGGAGCCGTCC
AACTGGCTGATGATCCTGGAGATTGTCAAGAAGGGCGTCTACCACGAGAT
GGGCAAGGCGGTGCGCGACGACGTGAGCATGGTCCACTTCATCACGCGCT
TCGAGGAGGCCGACGAGCGCGAGCATCTGGCGCGTGCCCATATTGCACGC
CTGGCGCCCTCCCAGGTCATCCCTTTCAAGCGGGTGGTGACGCAGATGGT
CGACCACTTCGAGAGCCGCGTGAACGACCTGACCGAGGCCGAGCTGGCGC
TGGCGGGTAAGGTGCTCGAGGTGGAGGATATCTTGGAGGAAGTGCACCCG
GACTCGTCGCTTCTAGCACTTCTGCAGACCAAGGAGGGCGGGTTGGGGCT
GGAGGCCTACAAAATGGGTGCTGAGACGCTGTTGCACGACCCCCGCGAGT
GGGACGACAGCGCGTTGGCTGGCCGGGAGGACGAGCTCTTTTCGCCTGAG
TACTTGGCTGCCAAGTACGACCGCATCCTCAAACACTACGGATTTACCGC
TTCCGGTCAGGAAGGCCGGGGCATGGGGAACGTCGGGGAGGATGAAGAGA
AGGAAGGGAAGGAGGATATCGAGCAGGAAAGGATACTTGGCGAGGGATCG
GCAGGAGCAATTGGCCGGGGATCTGCCGGGACGTTGCCCGCTAATCTTGC
CAAAACTGTAGCTGGGAAGGGCGGGGAGAAGGAAGAGGAGGTGGAGGAGA
CGGGGGGTTCCGGGAGCATTCTTGAGGCGCTTCAAGAAGAAGGTGTGCTG
TAA

protein sequence of NO01G00130.1

>NO01G00130.1-protein ID=NO01G00130.1-protein|Name=NO01G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=551bp
MFEGGVRSAMQEANRVAAKGQRRKRVLAAVKEVAQSKEKEEEGGGGVKEG
LVTLQMMFEGTGLKGGLDVLAGPLGETSEDLASWERDREGAGEKEGAVLQ
SLEEEEEEEDDEDEWDESLGVTGEADPFGDVGWDVAARFDLLVRELEATV
DSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAAAGGEEEEEEGGRWG
VGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVA
EEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPS
NWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIAR
LAPSQVIPFKRVVTQMVDHFESRVNDLTEAELALAGKVLEVEDILEEVHP
DSSLLALLQTKEGGLGLEAYKMGAETLLHDPREWDDSALAGREDELFSPE
YLAAKYDRILKHYGFTASGQEGRGMGNVGEDEEKEGKEDIEQERILGEGS
AGAIGRGSAGTLPANLAKTVAGKGGEKEEEVEETGGSGSILEALQEEGVL
*

Synonyms

Publications