NO01G00130.1, NO01G00130.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G00130.1
Unique NameNO01G00130.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1653
Alignment locationchr1:21009..22661 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:21009..22661 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO01G00130.1 vs.
Match: EWM28943.1 (hypothetical protein Naga_100347g2 [Nannochloropsis gaditana])

HSP 1 Score: 755.7 bits (1950), Expect = 9.700e-215
Identity = 416/557 (74.69%), Postives = 471/557 (84.56%), Query Frame = 0 
Query:    1 MFEGGVRSAMQEANRVAAKGQRRKRVLAAVKEVAQSKEKEEEGGGGVKEGLVTLQMMFEGTGLKGGLDVLAGPLGETSEDLASWERDREGAGEKEGAVLQSLEEEEEEEDDEDEWDESLGVTGEADPFGDVGWDVAARFDLLVRELEATVDSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAAAGGEEEEEEGGRWGVGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVAEEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPSNWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIARLAPSQVIPFKRVVTQMVDHFESRVNDLTEAELALAGKVLEVEDILEEVHPDSSLLALLQTKEGGLGLEAYKMGAETLLHDPREWDDSALAGREDELFSPEYLAAKYDRILKHYGFTASGQEGRGMGNVGEDEEKEGKEDI-EQERILGEGSAGAIGRGSAGTLPANL------AKTVAGKGGEKEEEVEETGGSGSILEALQEEGVL 551
            MFE G+RSA QEA+RVAAKGQR+K++LA VKEVA+++++E  G GGVKEGL TL+MMFEGTGLKGG+DV+AGP GE S DL SWER  E A  + G   ++  EE E+++DEDEWDE+LG  G+ADP GD+GWDVAARFD+LVRELEATVDSPDLLP IASQYHNVFLSRHFLGLMRARLEACEAA  GEE+ E           VTAATPVVLARMV FAEQ+VVQVQEMGQLYELQQLDKIKAICAVAEEDM +LSEYVSSRK++LDEDFVRYLQYL+EAEK+RL+GAGV RPEREPSNWLMILEIVKKGVYHE+GKAVRDDVSMVHFITRF+EADEREHL RAH+ARLAPSQVIPFKRVV QMVDHFESRVN+L+EAEL+LAG+VLEVED+LEE+HPDSSLLALLQ+KEGG+GLEAYK GAETLLHDPREWDDSA+AG+EDELFSPEYLAAKYDRILKHYGF+AS Q GRGMG  G+ EE+E K  I + E ILG G+A      + G LPA L       KT +G   EKEE    + G+ SI EAL+EEG+L
Sbjct:  436 MFESGLRSAKQEADRVAAKGQRQKQMLAVVKEVAETRQREVGGKGGVKEGLATLEMMFEGTGLKGGVDVMAGPPGEESLDLRSWERGAEEA--RVGREGEARSEEVEDDEDEDEWDEALGSMGDADPLGDLGWDVAARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEG----------VTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETLLHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFSASRQRGRGMGQ-GDAEEEERKAGIGDIEGILG-GNA-----DTRGALPAALEAWVGTEKTESGPKEEKEEHGVLSVGAASIEEALREEGLL 973
The following BLAST results are available for this feature:
BLAST of NO01G00130.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28943.19.700e-21574.69hypothetical protein Naga_100347g2 [Nannochloropsi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G00130NO01G00130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G00130.1NO01G00130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G00130.1.cds1NO01G00130.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G00130.1 ID=NO01G00130.1|Name=NO01G00130.1|organism=Nannochloropsis oceanica|type=mRNA|length=1653bp
ATGTTCGAAGGAGGGGTGCGGAGTGCCATGCAAGAGGCGAACCGAGTGGC
AGCCAAGGGGCAGCGGCGGAAGCGAGTGCTGGCGGCCGTCAAGGAGGTGG
CTCAGAGCAAAGAGAAGGAAGAGGAGGGAGGCGGAGGAGTGAAGGAGGGG
TTGGTGACGCTGCAGATGATGTTTGAGGGCACGGGGCTGAAGGGTGGCCT
GGACGTGCTGGCAGGACCACTGGGGGAGACGAGTGAGGACTTAGCGTCGT
GGGAGAGGGACAGGGAGGGAGCGGGTGAGAAGGAAGGCGCGGTGCTCCAG
AGCTTGGAGGAGGAGGAGGAGGAGGAAGACGATGAAGACGAGTGGGACGA
GTCGCTGGGGGTCACGGGCGAGGCAGACCCTTTCGGTGACGTGGGGTGGG
ACGTGGCGGCGCGGTTTGACCTGCTGGTGCGGGAGCTGGAGGCGACAGTG
GACTCGCCCGACCTACTGCCGGGCATAGCTAGCCAGTACCACAACGTCTT
CCTAAGCCGTCACTTCCTTGGGCTGATGAGAGCCAGGCTGGAGGCGTGCG
AAGCGGCAGCAGGAGGCGAGGAGGAGGAGGAGGAGGGAGGCAGGTGGGGT
GTTGGTCGGAGCGAGGTGACGGCGGCGACGCCTGTGGTGCTGGCGCGCAT
GGTGAGTTTCGCGGAGCAGTTGGTAGTGCAGGTGCAGGAGATGGGCCAGC
TGTACGAGCTGCAGCAGCTGGACAAGATCAAGGCCATCTGTGCCGTGGCG
GAGGAGGACATGAGCAAGCTCTCGGAGTACGTCTCGAGCCGCAAGGACGA
GCTCGACGAGGACTTCGTGCGGTACCTGCAGTACCTGCTCGAGGCGGAAA
AGGTGCGGCTGAAGGGGGCGGGTGTGGCGCGGCCGGAGCGGGAGCCGTCC
AACTGGCTGATGATCCTGGAGATTGTCAAGAAGGGCGTCTACCACGAGAT
GGGCAAGGCGGTGCGCGACGACGTGAGCATGGTCCACTTCATCACGCGCT
TCGAGGAGGCCGACGAGCGCGAGCATCTGGCGCGTGCCCATATTGCACGC
CTGGCGCCCTCCCAGGTCATCCCTTTCAAGCGGGTGGTGACGCAGATGGT
CGACCACTTCGAGAGCCGCGTGAACGACCTGACCGAGGCCGAGCTGGCGC
TGGCGGGTAAGGTGCTCGAGGTGGAGGATATCTTGGAGGAAGTGCACCCG
GACTCGTCGCTTCTAGCACTTCTGCAGACCAAGGAGGGCGGGTTGGGGCT
GGAGGCCTACAAAATGGGTGCTGAGACGCTGTTGCACGACCCCCGCGAGT
GGGACGACAGCGCGTTGGCTGGCCGGGAGGACGAGCTCTTTTCGCCTGAG
TACTTGGCTGCCAAGTACGACCGCATCCTCAAACACTACGGATTTACCGC
TTCCGGTCAGGAAGGCCGGGGCATGGGGAACGTCGGGGAGGATGAAGAGA
AGGAAGGGAAGGAGGATATCGAGCAGGAAAGGATACTTGGCGAGGGATCG
GCAGGAGCAATTGGCCGGGGATCTGCCGGGACGTTGCCCGCTAATCTTGC
CAAAACTGTAGCTGGGAAGGGCGGGGAGAAGGAAGAGGAGGTGGAGGAGA
CGGGGGGTTCCGGGAGCATTCTTGAGGCGCTTCAAGAAGAAGGTGTGCTG
TAA
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protein sequence of NO01G00130.1

>NO01G00130.1-protein ID=NO01G00130.1-protein|Name=NO01G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=551bp
MFEGGVRSAMQEANRVAAKGQRRKRVLAAVKEVAQSKEKEEEGGGGVKEG
LVTLQMMFEGTGLKGGLDVLAGPLGETSEDLASWERDREGAGEKEGAVLQ
SLEEEEEEEDDEDEWDESLGVTGEADPFGDVGWDVAARFDLLVRELEATV
DSPDLLPGIASQYHNVFLSRHFLGLMRARLEACEAAAGGEEEEEEGGRWG
VGRSEVTAATPVVLARMVSFAEQLVVQVQEMGQLYELQQLDKIKAICAVA
EEDMSKLSEYVSSRKDELDEDFVRYLQYLLEAEKVRLKGAGVARPEREPS
NWLMILEIVKKGVYHEMGKAVRDDVSMVHFITRFEEADEREHLARAHIAR
LAPSQVIPFKRVVTQMVDHFESRVNDLTEAELALAGKVLEVEDILEEVHP
DSSLLALLQTKEGGLGLEAYKMGAETLLHDPREWDDSALAGREDELFSPE
YLAAKYDRILKHYGFTASGQEGRGMGNVGEDEEKEGKEDIEQERILGEGS
AGAIGRGSAGTLPANLAKTVAGKGGEKEEEVEETGGSGSILEALQEEGVL
*
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mRNA from alignment at chr1:21009..22661-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G00130.1 ID=NO01G00130.1|Name=NO01G00130.1|organism=Nannochloropsis oceanica|type=mRNA|length=1653bp|location=Sequence derived from alignment at chr1:21009..22661- (Nannochloropsis oceanica)
ATGTTCGAAGGAGGGGTGCGGAGTGCCATGCAAGAGGCGAACCGAGTGGC
AGCCAAGGGGCAGCGGCGGAAGCGAGTGCTGGCGGCCGTCAAGGAGGTGG
CTCAGAGCAAAGAGAAGGAAGAGGAGGGAGGCGGAGGAGTGAAGGAGGGG
TTGGTGACGCTGCAGATGATGTTTGAGGGCACGGGGCTGAAGGGTGGCCT
GGACGTGCTGGCAGGACCACTGGGGGAGACGAGTGAGGACTTAGCGTCGT
GGGAGAGGGACAGGGAGGGAGCGGGTGAGAAGGAAGGCGCGGTGCTCCAG
AGCTTGGAGGAGGAGGAGGAGGAGGAAGACGATGAAGACGAGTGGGACGA
GTCGCTGGGGGTCACGGGCGAGGCAGACCCTTTCGGTGACGTGGGGTGGG
ACGTGGCGGCGCGGTTTGACCTGCTGGTGCGGGAGCTGGAGGCGACAGTG
GACTCGCCCGACCTACTGCCGGGCATAGCTAGCCAGTACCACAACGTCTT
CCTAAGCCGTCACTTCCTTGGGCTGATGAGAGCCAGGCTGGAGGCGTGCG
AAGCGGCAGCAGGAGGCGAGGAGGAGGAGGAGGAGGGAGGCAGGTGGGGT
GTTGGTCGGAGCGAGGTGACGGCGGCGACGCCTGTGGTGCTGGCGCGCAT
GGTGAGTTTCGCGGAGCAGTTGGTAGTGCAGGTGCAGGAGATGGGCCAGC
TGTACGAGCTGCAGCAGCTGGACAAGATCAAGGCCATCTGTGCCGTGGCG
GAGGAGGACATGAGCAAGCTCTCGGAGTACGTCTCGAGCCGCAAGGACGA
GCTCGACGAGGACTTCGTGCGGTACCTGCAGTACCTGCTCGAGGCGGAAA
AGGTGCGGCTGAAGGGGGCGGGTGTGGCGCGGCCGGAGCGGGAGCCGTCC
AACTGGCTGATGATCCTGGAGATTGTCAAGAAGGGCGTCTACCACGAGAT
GGGCAAGGCGGTGCGCGACGACGTGAGCATGGTCCACTTCATCACGCGCT
TCGAGGAGGCCGACGAGCGCGAGCATCTGGCGCGTGCCCATATTGCACGC
CTGGCGCCCTCCCAGGTCATCCCTTTCAAGCGGGTGGTGACGCAGATGGT
CGACCACTTCGAGAGCCGCGTGAACGACCTGACCGAGGCCGAGCTGGCGC
TGGCGGGTAAGGTGCTCGAGGTGGAGGATATCTTGGAGGAAGTGCACCCG
GACTCGTCGCTTCTAGCACTTCTGCAGACCAAGGAGGGCGGGTTGGGGCT
GGAGGCCTACAAAATGGGTGCTGAGACGCTGTTGCACGACCCCCGCGAGT
GGGACGACAGCGCGTTGGCTGGCCGGGAGGACGAGCTCTTTTCGCCTGAG
TACTTGGCTGCCAAGTACGACCGCATCCTCAAACACTACGGATTTACCGC
TTCCGGTCAGGAAGGCCGGGGCATGGGGAACGTCGGGGAGGATGAAGAGA
AGGAAGGGAAGGAGGATATCGAGCAGGAAAGGATACTTGGCGAGGGATCG
GCAGGAGCAATTGGCCGGGGATCTGCCGGGACGTTGCCCGCTAATCTTGC
CAAAACTGTAGCTGGGAAGGGCGGGGAGAAGGAAGAGGAGGTGGAGGAGA
CGGGGGGTTCCGGGAGCATTCTTGAGGCGCTTCAAGAAGAAGGTGTGCTG
TAA
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Coding sequence (CDS) from alignment at chr1:21009..22661-

>NO01G00130.1 ID=NO01G00130.1|Name=NO01G00130.1|organism=Nannochloropsis oceanica|type=CDS|length=1653bp|location=Sequence derived from alignment at chr1:21009..22661- (Nannochloropsis oceanica)
ATGTTCGAAGGAGGGGTGCGGAGTGCCATGCAAGAGGCGAACCGAGTGGC
AGCCAAGGGGCAGCGGCGGAAGCGAGTGCTGGCGGCCGTCAAGGAGGTGG
CTCAGAGCAAAGAGAAGGAAGAGGAGGGAGGCGGAGGAGTGAAGGAGGGG
TTGGTGACGCTGCAGATGATGTTTGAGGGCACGGGGCTGAAGGGTGGCCT
GGACGTGCTGGCAGGACCACTGGGGGAGACGAGTGAGGACTTAGCGTCGT
GGGAGAGGGACAGGGAGGGAGCGGGTGAGAAGGAAGGCGCGGTGCTCCAG
AGCTTGGAGGAGGAGGAGGAGGAGGAAGACGATGAAGACGAGTGGGACGA
GTCGCTGGGGGTCACGGGCGAGGCAGACCCTTTCGGTGACGTGGGGTGGG
ACGTGGCGGCGCGGTTTGACCTGCTGGTGCGGGAGCTGGAGGCGACAGTG
GACTCGCCCGACCTACTGCCGGGCATAGCTAGCCAGTACCACAACGTCTT
CCTAAGCCGTCACTTCCTTGGGCTGATGAGAGCCAGGCTGGAGGCGTGCG
AAGCGGCAGCAGGAGGCGAGGAGGAGGAGGAGGAGGGAGGCAGGTGGGGT
GTTGGTCGGAGCGAGGTGACGGCGGCGACGCCTGTGGTGCTGGCGCGCAT
GGTGAGTTTCGCGGAGCAGTTGGTAGTGCAGGTGCAGGAGATGGGCCAGC
TGTACGAGCTGCAGCAGCTGGACAAGATCAAGGCCATCTGTGCCGTGGCG
GAGGAGGACATGAGCAAGCTCTCGGAGTACGTCTCGAGCCGCAAGGACGA
GCTCGACGAGGACTTCGTGCGGTACCTGCAGTACCTGCTCGAGGCGGAAA
AGGTGCGGCTGAAGGGGGCGGGTGTGGCGCGGCCGGAGCGGGAGCCGTCC
AACTGGCTGATGATCCTGGAGATTGTCAAGAAGGGCGTCTACCACGAGAT
GGGCAAGGCGGTGCGCGACGACGTGAGCATGGTCCACTTCATCACGCGCT
TCGAGGAGGCCGACGAGCGCGAGCATCTGGCGCGTGCCCATATTGCACGC
CTGGCGCCCTCCCAGGTCATCCCTTTCAAGCGGGTGGTGACGCAGATGGT
CGACCACTTCGAGAGCCGCGTGAACGACCTGACCGAGGCCGAGCTGGCGC
TGGCGGGTAAGGTGCTCGAGGTGGAGGATATCTTGGAGGAAGTGCACCCG
GACTCGTCGCTTCTAGCACTTCTGCAGACCAAGGAGGGCGGGTTGGGGCT
GGAGGCCTACAAAATGGGTGCTGAGACGCTGTTGCACGACCCCCGCGAGT
GGGACGACAGCGCGTTGGCTGGCCGGGAGGACGAGCTCTTTTCGCCTGAG
TACTTGGCTGCCAAGTACGACCGCATCCTCAAACACTACGGATTTACCGC
TTCCGGTCAGGAAGGCCGGGGCATGGGGAACGTCGGGGAGGATGAAGAGA
AGGAAGGGAAGGAGGATATCGAGCAGGAAAGGATACTTGGCGAGGGATCG
GCAGGAGCAATTGGCCGGGGATCTGCCGGGACGTTGCCCGCTAATCTTGC
CAAAACTGTAGCTGGGAAGGGCGGGGAGAAGGAAGAGGAGGTGGAGGAGA
CGGGGGGTTCCGGGAGCATTCTTGAGGCGCTTCAAGAAGAAGGTGTGCTG
TAA
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Synonyms
Publications