NO01G00120, NO01G00120 (gene) Nannochloropsis oceanica

Overview
NameNO01G00120
Unique NameNO01G00120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1478
Alignment locationchr1:18996..20473 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:18996..20473 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G00120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL007nonsL007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR042ncniR042Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009794NSK009794Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00120.1NO01G00120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|204823gene_12347Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100347g1gene1671Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00120.1NO01G00120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00120 ID=NO01G00120|Name=NO01G00120|organism=Nannochloropsis oceanica|type=gene|length=1478bp
ATGGGCGTTGGATTGGAGTCATCGACTTCATCCCGCCGACCAGATGAGAA
AGCAAACGCTCCACATCAAGATTCAGCAGACGCTGCGGACGTCTGCCACG
ACCACCTCCGCAGCCAGAGCGTTCACAGCTCGGGCAGCTCTGGCAGTTGC
GATGGCAGTAGTCCTCCACGTCGGAGCAGCCTAGGCTCGACGTCGTCGAA
ACAGGAGGCGAGGGAGAGAGAAGGCAAGGAAAAAGGGCGGGGCCAAGCAA
ATAGTCTCCTCGGCGTACAAGGCCGCTTGACTGGCGAGCTCATCAAGCCT
CCCGACGCGCACCGCGAATCTCTCTTCGCGCCCTTTTACGCTTCGGATGC
AGCAGGCCCACCTGCCAAGAAGCCGCCCTCCTATTTGGCCTCTGCCGACG
GTGGGGCGAAGGAGGAAACGTGGTGGATGAAGGATGGAGGAGGGAGCGGA
GGGGATGAGGAAGGAAACATGGACGAGAGTTTGACAGCACGCTTGCGGCG
GCACACGCGGGAAGTGGCGAATTTAAAGACTAAAGAGGAGAGGAAGGTGC
CGCAGAGGGAAAGCAATGGCGGAGATGGAGTGGACAGAGGGAGAAGAGGG
GGAGTCGACGAGATCCAGGACGAAGGGCGGGAGAAGGGAGGAAGAGGAGA
ACAGAACGACAAGGGGGAAAGGGATACCGGATTGAGAAGAGCTGAACAGG
GAGCGGCAATGCCCTTGCTGGTGCAACACCGTCAGCAAGAGCCTgtgacc
cattcccaccctgaaccctcccctctaccctctctttagctccctccctc
tccatcccctcgtcgaatctcccaaagtataccatcacagtggtcccttg
gcaaagggcttcatcgatctcttatccctcatcgactcgtcatgcctcat
ctggctgcctggggctcttccgctgcacgagcacttggagccatgccttc
ccctcgacctccttccctccctcttccttcataacctataaaatcacact
taccctcggtgactctttctcttttccgctgacatcctgcttttcgtctt
ccccctcattcgttacccctccctcgtcctccccgaccttcgtccagCCC
TCCAGCGCCATCCCGGTTCCCCGCACTCACACTACTATAAAGCGCTACTC
GGAGCTCCTGCGTTACCACCGTCTTTGGTGCGAGCAGAGACTTGTGCCAC
GATCCCTCAAGGCCAAATTTCCGCCCAAAACTCTGCTGCCGCCGACGATG
ACGATGGGCACAGTCAGGACGGTGGGGCCCGTTGGGCGAATGGACGGAGA
TGGTGAGGCAGGTGAGGCATCCAGCAGCACCCTGAAGAGGGCCTACAAGC
TGCAGCTCTATTTTCAAGCCTTGCTAGACTTGAAAGAGGAAGGGACAGAG
GAAGGAAGGATGCAGGGAGGCAATTTGGTGGAATCGCCTTTGTTCTGGGC
TATGTTTGCTGCCAGCGGGCCAGAATAG
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protein sequence of NO01G00120.1

>NO01G00120.1-protein ID=NO01G00120.1-protein|Name=NO01G00120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp
MGVGLESSTSSRRPDEKANAPHQDSADAADVCHDHLRSQSVHSSGSSGSC
DGSSPPRRSSLGSTSSKQEAREREGKEKGRGQANSLLGVQGRLTGELIKP
PDAHRESLFAPFYASDAAGPPAKKPPSYLASADGGAKEETWWMKDGGGSG
GDEEGNMDESLTARLRRHTREVANLKTKEERKVPQRESNGGDGVDRGRRG
GVDEIQDEGREKGGRGEQNDKGERDTGLRRAEQGAAMPLLVQHRQQEPPS
SAIPVPRTHTTIKRYSELLRYHRLWCEQRLVPRSLKAKFPPKTLLPPTMT
MGTVRTVGPVGRMDGDGEAGEASSSTLKRAYKLQLYFQALLDLKEEGTEE
GRMQGGNLVESPLFWAMFAASGPE*
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Synonyms
Publications