NO01G00030, NO01G00030 (gene) Nannochloropsis oceanica

Overview
NameNO01G00030
Unique NameNO01G00030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length564
Alignment locationchr1:4741..5304 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:4741..5304 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO01G00030 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 109.0 bits (271), Expect = 1.600e-20
Identity = 75/189 (39.68%), Postives = 109/189 (57.67%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLSGSLGNNQAFTDEPTLSNCRK--KGGARTTKLFC 187
            M RA  LLALGITL +TA Q + TL ++K +D +   +D+WSMKG L+DP   ++  I  EGL+ +L +     +    FAA+ C+   NGRGV CK  GAR+S K ++R P  A V+   N+N T     YYS SG+FRR QF ++ I     +  ++  +  F     +S+C +  KG  RTT++ C
Sbjct:    1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANVQ-NSNYNST---GGYYSASGMFRRLQFLQDPIVFPLTVVLNV-PSIPFPPSAMVSSCSEKIKGAGRTTRITC 183          
BLAST of NO01G00030 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana])

HSP 1 Score: 109.0 bits (271), Expect = 1.600e-20
Identity = 75/189 (39.68%), Postives = 110/189 (58.20%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLSGSLGNNQAFTDEPTLSNC--RKKGGARTTKLFC 187
            M R LSLLALG+TL +TA Q   TL ++K  + +   +D+WSMKG L++P  +++  I   GL+ +L++     ++   FAA  C+ L NGRGV CK  GAR+S KRT+R P  AKVK+    + ++S   YY  SG+FRR QF ++ +     +   +G+    T    +S C  R KG  R TK+ C
Sbjct:    1 MRRILSLLALGVTLVMTAGQE-FTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKVKS----SNSNSTGGYYGASGMFRRLQFLQDPVVTPLTVQVVVGST---TLPAIVSTCSERTKGAGRITKITC 180          
BLAST of NO01G00030 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana])

HSP 1 Score: 108.2 bits (269), Expect = 2.800e-20
Identity = 75/189 (39.68%), Postives = 109/189 (57.67%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLSGSLGNNQAFTDEPTLSNCRK--KGGARTTKLFC 187
            M RA  LLALGITL +TA Q + TL ++K +D +   +D+WSMKG L+DP   ++  I  EGL+ +L +     +    FAA+ C+   NGRGV CK  GAR+S K ++R P  A V+   N+N T     YYS SG+FRR QF ++ I     +  ++  +  F     +S+C +  KG  RTT++ C
Sbjct:   20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYVQ-NSNYNST---GGYYSASGMFRRLQFLQDPIVFPLTVVLNV-PSIPFPPSAMVSSCSEKIKGAGRTTRITC 202          
BLAST of NO01G00030 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana])

HSP 1 Score: 104.8 bits (260), Expect = 3.100e-19
Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF 145
            M R LSLLALG+TL +TA Q   TL ++K  + +   +D+WSMKG L++P  +++  I   GL+ +L++     ++   FAA  C+ L NGRGV CK  GAR+S KRT+R P  AKVK+    + ++S   YY  SG+FRR QF
Sbjct:   37 MRRILSLLALGVTLVMTAGQE-FTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKVKS----SNSNSTGGYYGASGMFRRLQF 174          
BLAST of NO01G00030 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana])

HSP 1 Score: 104.4 bits (259), Expect = 4.000e-19
Identity = 78/186 (41.94%), Postives = 100/186 (53.76%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKGGARTTKLFC 187
            M R LSLLALG+TLALT  Q ML+L SIK  + T  N+DKWSMKG L DP   ++S I   GL+  L+++ D  +   +FAA  C    N +G  CK  GAR+S  R  + P   KVK        +S   YYSVSG FR  Q +     S  L+  L      T   TL++C  + GA TT+  C
Sbjct:   68 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSI-RASKPPKGVKVKTY------NSTGGYYSVSGSFRGVQLQEDPVISP-LTAELTVQGVGTLSQTLTDCSVR-GAGTTRTTC 243          
BLAST of NO01G00030 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana])

HSP 1 Score: 104.0 bits (258), Expect = 5.200e-19
Identity = 78/186 (41.94%), Postives = 101/186 (54.30%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKGGARTTKLFC 187
            M R LSLLALG+TLALT  Q ML+L SIK  + T  N+DKWSMK  L DP   ++S I   GL+  L+++ D  +   TFAA  C    N +G  CK  GAR+S + +K  P +      K+HN T     YYSVSG FRR Q +    +   L+  L      T   TL+ C  K G +T K+ C
Sbjct:   80 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASK--PPKG---VGKSHNST---GGYYSVSGSFRRVQLQEDPVDFP-LTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTC 254          
BLAST of NO01G00030 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana])

HSP 1 Score: 104.0 bits (258), Expect = 5.200e-19
Identity = 78/186 (41.94%), Postives = 101/186 (54.30%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKGGARTTKLFC 187
            M R LSLLALG+TLALT  Q ML+L SIK  + T  N+DKWSMK  L DP   ++S I   GL+  L+++ D  +   TFAA  C    N +G  CK  GAR+S + +K  P +      K+HN T     YYSVSG FRR Q +    +   L+  L      T   TL+ C  K G +T K+ C
Sbjct:   11 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASK--PPKG---VGKSHNST---GGYYSVSGSFRRVQLQEDPVDFP-LTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTC 185          
BLAST of NO01G00030 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 102.4 bits (254), Expect = 1.500e-18
Identity = 74/189 (39.15%), Postives = 105/189 (55.56%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLSGSLGNNQAFTDEPTLSNC--RKKGGARTTKLFC 187
            M   LSLLALGITL +TA Q   TL +IK        +D+WSMKG L++P  +++  I   GL+ +L+++    ++   FAA  C+ L N RGV CK  GAR+  KRT+R P  AKVK+    +  +S   YY+ SG+FRR QF ++T+     +   +G     T    +S C  R K   R TK+ C
Sbjct:    1 MRCILSLLALGITLVMTAGQE-FTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKVKS----SSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQLVVGTT---TLPAIVSTCSERTKSAGRITKITC 180          
BLAST of NO01G00030 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 97.4 bits (241), Expect = 4.900e-17
Identity = 75/186 (40.32%), Postives = 100/186 (53.76%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKGGARTTKLFC 187
            M R LSLLALG+TLALT  Q ML+L SIK  + T  N+DKWSMKG L DP   ++S I   GL+  L++     +   +FAA  C    + +G  CK  GAR+S + +K  P +      K+HN T     Y+SVSG FRR Q +    +   L+  L      T   TL+ C  K G +T K+ C
Sbjct:    1 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSIRASK--PPKG---VGKSHNST---GGYFSVSGSFRRVQLQEDPVDFP-LTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTC 175          
BLAST of NO01G00030 vs. NCBI_GenBank
Match: EWM27397.1 (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana])

HSP 1 Score: 95.9 bits (237), Expect = 1.400e-16
Identity = 73/186 (39.25%), Postives = 105/186 (56.45%), Query Frame = 0
Query:    1 MHRALSLLALGITLA---LTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVP-HEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLSGSLGNNQAFTDEPTLSNC----RKKG 178
            M   LSLLALGITL    +T     L L SI+AVD +  N+D W MKG +NDP   ++ TI  +GL+ +L ++   L++ VTFAA  CR  ++G+   CK  GAR+  K ++R   +  K    K +N T     YYSV+G FRR  F EN + +   L+ +L  N++   + TL++C    RK G
Sbjct:   69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFIKTSRRPKINTPKTVHAKRYNST---GGYYSVTGTFRRLTFLENPVVSP--LTAALTVNESVLSD-TLTSCYDLPRKNG 248          
The following BLAST results are available for this feature:
BLAST of NO01G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 16
Match NameE-valueIdentityDescription
XP_005855033.11.600e-2039.68hypothetical protein NGA_0415500 [Nannochloropsis ... [more]
EWM30045.11.600e-2039.68hypothetical protein Naga_101600g1 [Nannochloropsi... [more]
EWM30036.12.800e-2039.68hypothetical protein Naga_100179g1 [Nannochloropsi... [more]
EWM20105.13.100e-1944.44hypothetical protein Naga_101776g1 [Nannochloropsi... [more]
EWM22005.14.000e-1941.94hypothetical protein Naga_100353g3 [Nannochloropsi... [more]
EWM22002.15.200e-1941.94hypothetical protein Naga_100353g5 [Nannochloropsi... [more]
EWM22004.15.200e-1941.94hypothetical protein Naga_100353g6 [Nannochloropsi... [more]
EWM20135.11.500e-1839.15hypothetical protein Naga_101626g1, partial [Nanno... [more]
XP_005852576.14.900e-1740.32hypothetical protein NGA_0721300 [Nannochloropsis ... [more]
EWM27397.11.400e-1639.25hypothetical protein Naga_101181g1 [Nannochloropsi... [more]

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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00030.1NO01G00030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00030.1NO01G00030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00030 ID=NO01G00030|Name=NO01G00030|organism=Nannochloropsis oceanica|type=gene|length=564bp
ATGCATCGCGCCCTTTCTCTGCTTGCCCTCGGCATCACCCTCGCCCTGAC
AGCGGCTCAGCCGATGTTGACCCTCACCTCCATTAAGGCAGTCGACTCGA
CAAGCAACAATCAGGACAAATGGAGCATGAAGGGCTTCCTCAACGATCCT
GATGCCGATTTAATCTCGACCATCGCCGATGAGGGCTTGAGCGCGGACCT
TGTAAACAGTGACGATCTTCTTGTGAGTGATGTGACATTTGCCGCGGCTG
CTTGTAGAGACCTCAGCAACGGCAGGGGAGTCCTTTGCAAGGATGCGGGC
GCCCGTATCTCGTTCAAGAGGACGAAGAGGGTACCGCATGAGGCCAAGGT
GAAGGCGATGAAGAACCACAACAAGACGGACAGCGCTTCTTCCTACTACA
GTGTGTCGGGTGTTTTCCGCCGTCAGCAATTCGAGAACACTATCTCTAAC
TCAGCGAATCTATCAGGAAGTCTTGGCAACAACCAGGCATTTACTGACGA
GCCCACACTCTCTAACTGCAGGAAGAAGGGGGGTGCCAGGACCACCAAGC
TCTTCTGCCAGTAA
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protein sequence of NO01G00030.1

>NO01G00030.1-protein ID=NO01G00030.1-protein|Name=NO01G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=188bp
MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDP
DADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAG
ARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISN
SANLSGSLGNNQAFTDEPTLSNCRKKGGARTTKLFCQ*
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Synonyms
Publications