EWM22819.1, cds7851 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22819.1 vs. NCBI_GenBank
Match: gi|585103451|gb|EWM22819.1| (Poliketide cyclase/dehydrase [Nannochloropsis gaditana]) HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 Query: 1 MASNRNTGCVICNTLRGKILGYRLRMMEDTSLPSSNDKRETGTSLCDIKIQRAPAPHRASTRLITASLLVLRPRASVFRLLTAYDRLARYLPNCSHSQCIPLPPGATASVRITQTAVETFPFCEVKAKPTSAPPPSSSSFFSSLTSFVQPLLQATVILDVYEDQENYTISSFLVENTPAFLKLYEGKWRLLEEEVGGQQVTRMCYEATFRPRVLVPLMAVEWKMKRDVAVNLHALKRAAEEGWEDRVEEEGAEEGADEGAEEGEVFWDCTDGVDEETTCESPSPSNALSSASGPSSPAACTPSSGQPSTGKQSGLARGWALSFFRRVDLRRMGKRGGRGTREGKPVR 347 MASNRNTGCVICNTLRGKILGYRLRMMEDTSLPSSNDKRETGTSLCDIKIQRAPAPHRASTRLITASLLVLRPRASVFRLLTAYDRLARYLPNCSHSQCIPLPPGATASVRITQTAVETFPFCEVKAKPTSAPPPSSSSFFSSLTSFVQPLLQATVILDVYEDQENYTISSFLVENTPAFLKLYEGKWRLLEEEVGGQQVTRMCYEATFRPRVLVPLMAVEWKMKRDVAVNLHALKRAAEEGWEDRVEEEGAEEGADEGAEEGEVFWDCTDGVDEETTCESPSPSNALSSASGPSSPAACTPSSGQPSTGKQSGLARGWALSFFRRVDLRRMGKRGGRGTREGKPVR Sbjct: 1 MASNRNTGCVICNTLRGKILGYRLRMMEDTSLPSSNDKRETGTSLCDIKIQRAPAPHRASTRLITASLLVLRPRASVFRLLTAYDRLARYLPNCSHSQCIPLPPGATASVRITQTAVETFPFCEVKAKPTSAPPPSSSSFFSSLTSFVQPLLQATVILDVYEDQENYTISSFLVENTPAFLKLYEGKWRLLEEEVGGQQVTRMCYEATFRPRVLVPLMAVEWKMKRDVAVNLHALKRAAEEGWEDRVEEEGAEEGADEGAEEGEVFWDCTDGVDEETTCESPSPSNALSSASGPSSPAACTPSSGQPSTGKQSGLARGWALSFFRRVDLRRMGKRGGRGTREGKPVR 347
BLAST of EWM22819.1 vs. NCBI_GenBank
Match: gi|585109050|gb|EWM26918.1| (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 72.4034 bits (176), Expect = 2.402e-10 Identity = 58/198 (29.29%), Postives = 96/198 (48.48%), Query Frame = 0 Query: 59 ASTRLITASLLVLRPRASVFRLLTAYDRLARYLPNCSHSQCIPLPPGATA-----SVRITQTAVETFPFCEVKAKPTSAPPPSSSSFFSSLTSFVQPLLQATVILDVYEDQE--NYTISSFLVENTPAFLKLYEGKWRL--------LEEEVGGQQVTRMCYEATFRPRVLVPLMAVEWKMKRDVAVNLHALKRAAEE 241 A+ R I++S++V RP + V+++LT Y+ L+ Y+PN + S+ + PPG A VR+ Q +T KA SLT ++ + +A ED++ I LV++ A + G+WRL E T++ Y +P+ VP+ A+EW++K DV NL A+K A+E+ Sbjct: 221 ANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKA---------------SLTMDMEEVFEA-------EDEKLGQRRIKFRLVDS--AMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEK 394
BLAST of EWM22819.1 vs. NCBI_GenBank
Match: gi|1189388856|gb|OSX75863.1| (hypothetical protein BU14_0218s0029 [Porphyra umbilicalis]) HSP 1 Score: 63.1586 bits (152), Expect = 9.567e-8 Identity = 57/204 (27.94%), Postives = 95/204 (46.57%), Query Frame = 0 Query: 41 TGTSLCDIKIQRAPAPHRASTRLITASLLVLRPRASVFRLLTAYDRLARYLPNCSHSQCIPLPPGATASVRITQTAVETFPFCEVKAKPTSAPPPSSSSFFSSLTSFVQPLLQATVILDVYE----DQENYTISSFLVENTPAFLKLYEGKWRLLEEEVGGQQVTRMCYEATFRPRVLVPLMAVEWKMKRDVAVNLHALKRAAE 240 +GT D+ I APA ++ R I +++L+ +V+ LT Y RL+ ++PN ++S+ P G +R+ Q V+ + K A V+LD+ E D + I F++ ++ F + G WR+ E GG T + Y+ +P+ LVP+ AVEW++K DV NL A++ E Sbjct: 94 SGTRRPDVAIS-APAWNK---RTIRSAILIRASLPTVWSALTDYSRLSTFIPNLAYSKQRFHPTGG---IRLEQWGVQRIVGFQFK---------------------------AAVVLDMTEVTATDSKERAI-DFVLASSRDFAAFF-GTWRMSAVEGGG---TWLEYDVNIQPKGLVPVKAVEWRIKEDVPSNLLAVRSYCE 258
BLAST of EWM22819.1 vs. NCBI_GenBank
Match: gi|938301068|gb|KPQ34613.1| (Polyketide cyclase / dehydrase and lipid transport [Phormidesmis priestleyi Ana]) HSP 1 Score: 60.4622 bits (145), Expect = 2.999e-7 Identity = 51/222 (22.97%), Postives = 99/222 (44.59%), Query Frame = 0 Query: 22 YRLRMMEDTSLPSSNDKRETGTSLCDIKIQRAPAPHRASTRLITASLLVLRPRASVFRLLTAYDRLARYLPNCSHSQCIPLPPGATASVRITQTAVETFPFCEVKAKPTSAPPPSSSSFFSSLTSFVQPLLQATVILDVYEDQENYTISSFLVENTPAFLKLYEGKWRL--LEEEVGGQQVTRMCYEATFRPRVLVPLMAVEWKMKRDVAVNLHALKRAAEE 241 + L +ED+S ++ + R + +I ++ PA R I A++ + +P V++++T Y+RLA ++PN + S+ + G +I F FC A V+LD+ E+ Y + + E K +EG W+L +E GQ +T++ Y+ + +P +P +E + ++ +NL A+++ A E Sbjct: 4 HTLSPIEDSSRQATANSRTNDNAYVEISTEKRPAKERR----ILATITIPQPIEQVWQVITDYERLADFVPNLTSSKLVSNSEGRIRLEQIGSQCFLKFKFC------------------------------ARVVLDMTENFP-YELGFAMKEGD---FKQFEGAWKLQSTTDEQSGQPITQLSYDLSVKPPRAMPATLIEHHICHNLTLNLLAIRQRALE 187 The following BLAST results are available for this feature:
BLAST of EWM22819.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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