EWM22832.1, cds7842 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|553186678|ref|XP_005854467.1| (kh domain protein [Nannochloropsis gaditana CCMP526] >gi|422294591|gb|EKU21891.1| kh domain protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 665.996 bits (1717), Expect = 0.000e+0 Identity = 329/330 (99.70%), Postives = 330/330 (100.00%), Query Frame = 0 Query: 1 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAK+G Sbjct: 126 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIG 455
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|585103468|gb|EWM22832.1| (rna-binding protein nova-2 [Nannochloropsis gaditana]) HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0 Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0 Query: 1 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVGGQ 332 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVGGQ Sbjct: 1 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVGGQ 332
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|299116377|emb|CBN74642.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 108.612 bits (270), Expect = 1.785e-22 Identity = 77/239 (32.22%), Postives = 125/239 (52.30%), Query Frame = 0 Query: 111 LTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNS----------------------IIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLA 327 L+I+ P++AMG+LIG+ G+ +E+ + V++ +Q+ K + EG +RG+ LSGS + VA + LI +KL RR + I G + + P+ V+W + G LIGK G+ + +I + SGA++R+ E L +R VYV G K++R+ AL LIR G + P+ V VP +AVG ++G +GA ++ L E TGA++ +A Sbjct: 99 LSIMCPSDAMGMLIGKGGSGLREMQEKT-GVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSL-GKDSAERIVYVKGNKSQREAALELIRTN--PKITGRVASPSEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVA 333
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|511896509|ref|XP_004767851.1| (PREDICTED: RNA-binding protein Nova-2 [Mustela putorius furo]) HSP 1 Score: 83.1889 bits (204), Expect = 1.854e-14 Identity = 76/271 (28.04%), Postives = 125/271 (46.13%), Query Frame = 0 Query: 74 EAETPGA-KRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV----------GGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330 E E P + KRPL P E + S GE+ E Y L +L+P+ A G +IG+ G T ++ + +K+ KD G +R + G+ E + I +K+ + ++ + L+ PD K +P G +IGK GAT+ + +SGA ++L + E Q+R V V+G + KA++ I +KV Y + G + + V + VP VG ++G G + E +E TGAR+ ++K G Sbjct: 2 EPEAPDSRKRPLETPP---EVVCTKRSNTGEEGE--YFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 264 HSP 2 Score: 67.3958 bits (163), Expect = 4.890e-9 Identity = 55/168 (32.74%), Postives = 88/168 (52.38%), Query Frame = 0 Query: 113 ILVPNEAMGLLIGRAGATRQEIVSRADN-VRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLID--RRNSIIREGNLEDTLFAGPDPRV-TVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV 276 ++VPN GL+IG+ GAT + ++ ++ V+L K G +R +T+SG E+V KA I+QK+ + + +S + N+ AGP V+ +P L GA++GK G TL +GARI++ + E P +R V +TG A A LI ++V Sbjct: 135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCL---NISYANVAGPVANSELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRR-VTITGSPAATQAAQYLISQRV 295
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|1169019147|ref|XP_020461271.1| (RNA-binding protein Nova-1-like [Monopterus albus]) HSP 1 Score: 80.1073 bits (196), Expect = 2.283e-13 Identity = 70/254 (27.56%), Postives = 118/254 (46.46%), Query Frame = 0 Query: 81 KRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVG-GHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330 KRPL P +R +GE Y L +L+P+ A G +IG+ G T ++ + +K+ KD G +R + G+ E + I +K+ + S + L+ PD K +P G +IGK GAT+ + +SGA ++L + E Q+R V ++G + KA+ +I +K+ L +G + + V + VP VG ++G G + E +E TGAR+ ++K G Sbjct: 34 KRPLETPTEASSTKRTNTGEEGE-----YFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQTEKLAEG-AKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 278 HSP 2 Score: 63.929 bits (154), Expect = 7.304e-8 Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 0 Query: 113 ILVPNEAMGLLIGRAGATRQEIVSRADN-VRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLI-DRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV 276 ++VPN GL+IG+ GAT + ++ ++ V+L K G +R +T+SG E+ KA +I+QK+ D + + EG E V+ +P L GA++GK G TL +GARI++ + E P + R V +TG +A A LI +++ Sbjct: 159 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQTEKLAEGAKE-----------VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGT-RNRKVTITGSQAATQAAQYLISQRI 309
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|602692936|ref|XP_007458565.1| (PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Lipotes vexillifer]) HSP 1 Score: 79.7221 bits (195), Expect = 2.477e-13 Identity = 76/275 (27.64%), Postives = 126/275 (45.82%), Query Frame = 0 Query: 74 EAETPGA-KRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV----------GGHYFGLLGQGFSPDA----VVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330 E E P + KRPL P E + S GE+ E Y L +L+P+ A G +IG+ G T ++ + +K+ KD G +R + G+ E + I +K+ + ++ + L+ PD K +P G +IGK GAT+ + +SGA ++L + E Q+R V V+G + KA++ I +KV Y + G + ++ V + VP VG ++G G + E +E TGAR+ ++K G Sbjct: 2 EPEAPDSRKRPLETPP---EVVCTKRSNTGEEGE--YFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 268 HSP 2 Score: 68.5514 bits (166), Expect = 2.070e-9 Identity = 54/169 (31.95%), Postives = 85/169 (50.30%), Query Frame = 0 Query: 113 ILVPNEAMGLLIGRAGATRQEIVSRADN-VRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSI----IREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV 276 ++VPN GL+IG+ GAT + ++ ++ V+L K G +R +T+SG E+V KA I+QK+ + S I N+ A + V+ +P L GA++GK G TL +GARI++ + E P +R V +TG A A LI ++V Sbjct: 135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRR-VTITGSPAATQAAQYLISQRV 299
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|584089727|ref|XP_006764483.1| (PREDICTED: RNA-binding protein Nova-2 [Myotis davidii]) HSP 1 Score: 78.1814 bits (191), Expect = 7.692e-13 Identity = 73/267 (27.34%), Postives = 122/267 (45.69%), Query Frame = 0 Query: 80 AKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV-----------GGHYFGL--LGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330 A+RPL P E + S GE+ E Y L +L+P+ A G +IG+ G T ++ + +K+ KD G +R + G+ E + I +K+ + ++ + L+ PD K +P G +IGK GAT+ + +SGA ++L + E Q+R V V+G + KA++ I +KV G + L + + V + VP VG ++G G + E +E TGAR+ ++K G Sbjct: 10 AQRPLETPP---EVVCTKRSNTGEEGE--YFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 268
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|1111103611|ref|XP_019245584.1| (PREDICTED: protein BTR1-like isoform X2 [Nicotiana attenuata]) HSP 1 Score: 78.1814 bits (191), Expect = 9.674e-13 Identity = 67/265 (25.28%), Postives = 119/265 (44.91%), Query Frame = 0 Query: 103 EQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVG--GHY---------FGL-LGQGFSP-------------------------DAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330 + +E++ ++ L+ N G +IG+ G+T + SR+ R+++ + G DR + +SG E V KA IL KL+ E +ED DPR V+ +P G +IGK GA + +S A I++ +++ P H R V VTG E+ +A+ LI K+ HY + + +G + P ++V + V +G+++G G + E+ + +GAR+ ++ G Sbjct: 37 DHEENTISVKFLLSNAEAGSIIGKGGSTISDFQSRS-GARIQLSRNNEFFPGTTDRIVMVSGPVEDVLKAVDFILNKLL-------SESYVEDG--GSVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPGLHD-RLVIVTGTLGEQMRAIELILHKLAEDSHYKQNMNAPFPYAVYVGMNYGPRNGVGGRFPNNRYQNNVQSNTEDRNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRG 290
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|698443333|ref|XP_009764392.1| (PREDICTED: RNA-binding protein Nova-1 isoform X2 [Nicotiana sylvestris] >gi|1025152267|ref|XP_016467789.1| PREDICTED: protein BTR1-like isoform X2 [Nicotiana tabacum]) HSP 1 Score: 78.1814 bits (191), Expect = 1.206e-12 Identity = 66/265 (24.91%), Postives = 118/265 (44.53%), Query Frame = 0 Query: 103 EQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVG--GHYFG----------LLGQGFSP-------------------------DAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330 + +E++ ++ L+ N G +IG+ G+T + SR+ R+++ + G DR + +SG E V KA IL KL+ E ++ED DPR V+ +P G +IGK GA + +S A I++ +++ P H R V V+G E+ +A+ LI K+ HY +G + P ++V + V +G+++G G + E+ + +GAR+ ++ G Sbjct: 36 DHEENTISVKFLLSNAEAGSVIGKGGSTISDFQSRS-GARIQLSRNNEFFPGTTDRIVMVSGPVEDVLKAVDFILNKLL-------CESHVEDG--GNVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPGLHD-RLVIVSGTLGEQMRAIELILHKLAEDSHYIQNMNAPFPYAVYVGMNYGPRNGVGGRFPNNRYQNNVQSNSEDRNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRG 289
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|432101641|gb|ELK29690.1| (RNA-binding protein Nova-2 [Myotis davidii]) HSP 1 Score: 77.411 bits (189), Expect = 1.509e-12 Identity = 61/229 (26.64%), Postives = 108/229 (47.16%), Query Frame = 0 Query: 105 DESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330 +E Y L +L+P+ A G +IG+ G T ++ + +K+ KD G +R + G+ E + I +K+ + ++ + L+ PD K +P G +IGK GAT+ + +SGA ++L + E Q+R V V+G + KA++ I +K+ + + V + VP VG ++G G + E +E TGAR+ ++K G Sbjct: 37 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTVSGEPEQVHKAVSAIVQKLAAES--------AKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 254 The following BLAST results are available for this feature:
BLAST of EWM22832.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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