EWM22832.1, cds7842 (CDS) Nannochloropsis gaditana

Overview
NameEWM22832.1
Unique Namecds7842
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002475.1:14914..15292 +
Alignment locationCM002475.1:15517..15638 +
Alignment locationCM002475.1:16061..16157 +
Alignment locationCM002475.1:16556..16618 +
Alignment locationCM002475.1:16854..17017 +
Alignment locationCM002475.1:17202..17375 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22832.1
Productrna-binding protein nova-2
Orig transcript idgnl|cribi|Naga_100471g1.2042.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002475.1supercontigCM002475.1:14914..15292 +
CM002475.1supercontigCM002475.1:15517..15638 +
CM002475.1supercontigCM002475.1:16061..16157 +
CM002475.1supercontigCM002475.1:16556..16618 +
CM002475.1supercontigCM002475.1:16854..17017 +
CM002475.1supercontigCM002475.1:17202..17375 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR004088KH_dom_type_1
IPR004087KH_dom
Homology
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|553186678|ref|XP_005854467.1| (kh domain protein [Nannochloropsis gaditana CCMP526] >gi|422294591|gb|EKU21891.1| kh domain protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 665.996 bits (1717), Expect = 0.000e+0
Identity = 329/330 (99.70%), Postives = 330/330 (100.00%), Query Frame = 0
Query:    1 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330
            MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAK+G
Sbjct:  126 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIG 455          
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|585103468|gb|EWM22832.1| (rna-binding protein nova-2 [Nannochloropsis gaditana])

HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0
Query:    1 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVGGQ 332
            MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVGGQ
Sbjct:    1 MCDAAKSQKKEGEEKEMIAGEEEKVMAEEEQEETEEEKREEEKKEEPGTEQDRKAEKEESSRHASSRWSSRPAEAETPGAKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVGGQ 332          
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|299116377|emb|CBN74642.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 108.612 bits (270), Expect = 1.785e-22
Identity = 77/239 (32.22%), Postives = 125/239 (52.30%), Query Frame = 0
Query:  111 LTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNS----------------------IIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLA 327
            L+I+ P++AMG+LIG+ G+  +E+  +   V++ +Q+ K + EG  +RG+ LSGS + VA  + LI +KL  RR +                      I   G  + +    P+    V+W +     G LIGK G+ + +I + SGA++R+  E  L      +R VYV G K++R+ AL LIR        G +     P+   V VP +AVG ++G +GA ++ L E TGA++ +A
Sbjct:   99 LSIMCPSDAMGMLIGKGGSGLREMQEKT-GVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSL-GKDSAERIVYVKGNKSQREAALELIRTN--PKITGRVASPSEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVA 333          
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|511896509|ref|XP_004767851.1| (PREDICTED: RNA-binding protein Nova-2 [Mustela putorius furo])

HSP 1 Score: 83.1889 bits (204), Expect = 1.854e-14
Identity = 76/271 (28.04%), Postives = 125/271 (46.13%), Query Frame = 0
Query:   74 EAETPGA-KRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV----------GGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330
            E E P + KRPL  P    E    + S  GE+ E  Y L +L+P+ A G +IG+ G T  ++  +     +K+   KD   G  +R   + G+ E +      I +K+ +   ++ +      L+      PD     K  +P    G +IGK GAT+  +  +SGA ++L  + E      Q+R V V+G   +  KA++ I +KV             Y  + G   + + V + VP   VG ++G  G  + E +E TGAR+ ++K G
Sbjct:    2 EPEAPDSRKRPLETPP---EVVCTKRSNTGEEGE--YFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 264          

HSP 2 Score: 67.3958 bits (163), Expect = 4.890e-9
Identity = 55/168 (32.74%), Postives = 88/168 (52.38%), Query Frame = 0
Query:  113 ILVPNEAMGLLIGRAGATRQEIVSRADN-VRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLID--RRNSIIREGNLEDTLFAGPDPRV-TVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV 276
            ++VPN   GL+IG+ GAT + ++ ++   V+L     K  G    +R +T+SG  E+V KA   I+QK+ +  + +S +   N+     AGP      V+  +P  L GA++GK G TL      +GARI++  + E  P    +R V +TG  A    A  LI ++V
Sbjct:  135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCL---NISYANVAGPVANSELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRR-VTITGSPAATQAAQYLISQRV 295          
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|1169019147|ref|XP_020461271.1| (RNA-binding protein Nova-1-like [Monopterus albus])

HSP 1 Score: 80.1073 bits (196), Expect = 2.283e-13
Identity = 70/254 (27.56%), Postives = 118/254 (46.46%), Query Frame = 0
Query:   81 KRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVG-GHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330
            KRPL  P      +R     +GE     Y L +L+P+ A G +IG+ G T  ++  +     +K+   KD   G  +R   + G+ E +      I +K+ +   S  +      L+      PD     K  +P    G +IGK GAT+  +  +SGA ++L  + E      Q+R V ++G   +  KA+ +I +K+        L +G + + V + VP   VG ++G  G  + E +E TGAR+ ++K G
Sbjct:   34 KRPLETPTEASSTKRTNTGEEGE-----YFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQTEKLAEG-AKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 278          

HSP 2 Score: 63.929 bits (154), Expect = 7.304e-8
Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 0
Query:  113 ILVPNEAMGLLIGRAGATRQEIVSRADN-VRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLI-DRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV 276
            ++VPN   GL+IG+ GAT + ++ ++   V+L     K  G    +R +T+SG  E+  KA  +I+QK+  D +   + EG  E            V+  +P  L GA++GK G TL      +GARI++  + E  P   + R V +TG +A    A  LI +++
Sbjct:  159 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQTEKLAEGAKE-----------VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGT-RNRKVTITGSQAATQAAQYLISQRI 309          
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|602692936|ref|XP_007458565.1| (PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Lipotes vexillifer])

HSP 1 Score: 79.7221 bits (195), Expect = 2.477e-13
Identity = 76/275 (27.64%), Postives = 126/275 (45.82%), Query Frame = 0
Query:   74 EAETPGA-KRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV----------GGHYFGLLGQGFSPDA----VVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330
            E E P + KRPL  P    E    + S  GE+ E  Y L +L+P+ A G +IG+ G T  ++  +     +K+   KD   G  +R   + G+ E +      I +K+ +   ++ +      L+      PD     K  +P    G +IGK GAT+  +  +SGA ++L  + E      Q+R V V+G   +  KA++ I +KV             Y  + G   + ++    V + VP   VG ++G  G  + E +E TGAR+ ++K G
Sbjct:    2 EPEAPDSRKRPLETPP---EVVCTKRSNTGEEGE--YFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 268          

HSP 2 Score: 68.5514 bits (166), Expect = 2.070e-9
Identity = 54/169 (31.95%), Postives = 85/169 (50.30%), Query Frame = 0
Query:  113 ILVPNEAMGLLIGRAGATRQEIVSRADN-VRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSI----IREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV 276
            ++VPN   GL+IG+ GAT + ++ ++   V+L     K  G    +R +T+SG  E+V KA   I+QK+ +   S     I   N+     A    +  V+  +P  L GA++GK G TL      +GARI++  + E  P    +R V +TG  A    A  LI ++V
Sbjct:  135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRR-VTITGSPAATQAAQYLISQRV 299          
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|584089727|ref|XP_006764483.1| (PREDICTED: RNA-binding protein Nova-2 [Myotis davidii])

HSP 1 Score: 78.1814 bits (191), Expect = 7.692e-13
Identity = 73/267 (27.34%), Postives = 122/267 (45.69%), Query Frame = 0
Query:   80 AKRPLGEPDLREERRRRRFSGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKV-----------GGHYFGL--LGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330
            A+RPL  P    E    + S  GE+ E  Y L +L+P+ A G +IG+ G T  ++  +     +K+   KD   G  +R   + G+ E +      I +K+ +   ++ +      L+      PD     K  +P    G +IGK GAT+  +  +SGA ++L  + E      Q+R V V+G   +  KA++ I +KV            G +     L    + + V + VP   VG ++G  G  + E +E TGAR+ ++K G
Sbjct:   10 AQRPLETPP---EVVCTKRSNTGEEGE--YFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 268          
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|1111103611|ref|XP_019245584.1| (PREDICTED: protein BTR1-like isoform X2 [Nicotiana attenuata])

HSP 1 Score: 78.1814 bits (191), Expect = 9.674e-13
Identity = 67/265 (25.28%), Postives = 119/265 (44.91%), Query Frame = 0
Query:  103 EQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVG--GHY---------FGL-LGQGFSP-------------------------DAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330
            + +E++ ++  L+ N   G +IG+ G+T  +  SR+   R+++    +   G  DR + +SG  E V KA   IL KL+        E  +ED      DPR  V+  +P    G +IGK GA +     +S A I++  +++  P  H  R V VTG   E+ +A+ LI  K+    HY         + + +G  + P                         ++V + V    +G+++G  G  + E+ + +GAR+ ++  G
Sbjct:   37 DHEENTISVKFLLSNAEAGSIIGKGGSTISDFQSRS-GARIQLSRNNEFFPGTTDRIVMVSGPVEDVLKAVDFILNKLL-------SESYVEDG--GSVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPGLHD-RLVIVTGTLGEQMRAIELILHKLAEDSHYKQNMNAPFPYAVYVGMNYGPRNGVGGRFPNNRYQNNVQSNTEDRNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRG 290          
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|698443333|ref|XP_009764392.1| (PREDICTED: RNA-binding protein Nova-1 isoform X2 [Nicotiana sylvestris] >gi|1025152267|ref|XP_016467789.1| PREDICTED: protein BTR1-like isoform X2 [Nicotiana tabacum])

HSP 1 Score: 78.1814 bits (191), Expect = 1.206e-12
Identity = 66/265 (24.91%), Postives = 118/265 (44.53%), Query Frame = 0
Query:  103 EQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVG--GHYFG----------LLGQGFSP-------------------------DAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330
            + +E++ ++  L+ N   G +IG+ G+T  +  SR+   R+++    +   G  DR + +SG  E V KA   IL KL+        E ++ED      DPR  V+  +P    G +IGK GA +     +S A I++  +++  P  H  R V V+G   E+ +A+ LI  K+    HY             +G  + P                         ++V + V    +G+++G  G  + E+ + +GAR+ ++  G
Sbjct:   36 DHEENTISVKFLLSNAEAGSVIGKGGSTISDFQSRS-GARIQLSRNNEFFPGTTDRIVMVSGPVEDVLKAVDFILNKLL-------CESHVEDG--GNVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPGLHD-RLVIVSGTLGEQMRAIELILHKLAEDSHYIQNMNAPFPYAVYVGMNYGPRNGVGGRFPNNRYQNNVQSNSEDRNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRG 289          
BLAST of EWM22832.1 vs. NCBI_GenBank
Match: gi|432101641|gb|ELK29690.1| (RNA-binding protein Nova-2 [Myotis davidii])

HSP 1 Score: 77.411 bits (189), Expect = 1.509e-12
Identity = 61/229 (26.64%), Postives = 108/229 (47.16%), Query Frame = 0
Query:  105 DESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIRE---GNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330
            +E  Y L +L+P+ A G +IG+ G T  ++  +     +K+   KD   G  +R   + G+ E +      I +K+ +   ++ +      L+      PD     K  +P    G +IGK GAT+  +  +SGA ++L  + E      Q+R V V+G   +  KA++ I +K+            + + V + VP   VG ++G  G  + E +E TGAR+ ++K G
Sbjct:   37 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTVSGEPEQVHKAVSAIVQKLAAES--------AKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 254          
The following BLAST results are available for this feature:
BLAST of EWM22832.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553186678|ref|XP_005854467.1|0.000e+099.70kh domain protein [Nannochloropsis gaditana CCMP52... [more]
gi|585103468|gb|EWM22832.1|0.000e+0100.00rna-binding protein nova-2 [Nannochloropsis gadita... [more]
gi|299116377|emb|CBN74642.1|1.785e-2232.22conserved unknown protein [Ectocarpus siliculosus][more]
gi|511896509|ref|XP_004767851.1|1.854e-1428.04PREDICTED: RNA-binding protein Nova-2 [Mustela put... [more]
gi|1169019147|ref|XP_020461271.1|2.283e-1327.56RNA-binding protein Nova-1-like [Monopterus albus][more]
gi|602692936|ref|XP_007458565.1|2.477e-1327.64PREDICTED: LOW QUALITY PROTEIN: RNA-binding protei... [more]
gi|584089727|ref|XP_006764483.1|7.692e-1327.34PREDICTED: RNA-binding protein Nova-2 [Myotis davi... [more]
gi|1111103611|ref|XP_019245584.1|9.674e-1325.28PREDICTED: protein BTR1-like isoform X2 [Nicotiana... [more]
gi|698443333|ref|XP_009764392.1|1.206e-1224.91PREDICTED: RNA-binding protein Nova-1 isoform X2 [... [more]
gi|432101641|gb|ELK29690.1|1.509e-1226.64RNA-binding protein Nova-2 [Myotis davidii][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7864rna7864Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications