|
Gennome assembly for Vischeria sp. C74 |
unpublished |
Vischeria_C74_genome_v1.fasta |
|
Gene prediction for Vischeria sp. C74 |
unpublished |
Vischeria_C74_genome_v1_annotation_filtered.gff |
|
NoIMET1_WT_HS |
nfcore/rnaseq |
RNA-seq, WT_HS |
|
GSE139615 |
nf-core/rnaseq |
RNA-seq, Red/Blue/White, GSE139615 |
|
GSE149904 |
nfcore/rnaseq |
RNA-seq, phosphate deprivation, GSE149904 |
|
RNA_seq analysis for N. salina CCMP1776 v2 under N starvation |
Tuxedo |
RNA-seq, N-starvation, averaged by 3 replicates |
|
GSE178672 |
nf-core/rnaseq |
RNA-seq, NO06G02500/NO08G00280 knockout mutant |
|
PRJNA157867 |
nf-core/rnaseq |
RNA-seq, N+/N-, PRJNA157867 |
|
PRJNA933693 |
nf-core/rnaseq |
RNA-seq, Nitrogen-repletion |
|
PRJNA174770 |
nf-core/rnaseq |
RNA-seq, nitrogen depletion, PRJNA174770 |
|
SRP229557 |
nfcore/rnaseq |
RNA-seq, nitrogen and phosphorus deprivation, SRP229557 |
|
PRJNA182180 |
nf-core/rnaseq |
RNA-seq, N-deprivation, PRJNA182180 |
|
PRJNA943449 |
nf-core/rnaseq |
RNA-seq, mPSo/Lao/LAmPSo |
|
PRJNA285666 |
nf-core/rnaseq |
RNA-seq, Light:dark cycle, PRJNA285666 |
|
RNA-seq profiling for N. salina CCMP1776 under high salt and nitrogen limitation |
Tuxedo workflow |
RNA-seq, high salt and nitrogen limitation |
|
PRJNA241382 |
nf-core/rnaseq |
RNA-seq, HC vs VLC, PRJNA241382 |
|
GSE164714 |
nfcore/rnaseq |
RNA-seq, blue/red light |
|
Gennome assembly for N. oceanica LAMB2011 |
Canu |
PacBio Sequel, ~113X |
|
Genome assembly for N. salina CCMP1776 (version 2) |
HGAP3, SSPACE |
PacBio Sequel 100x 4G, illumina PE |
|
Gennome assembly for N. oceanica IMET1 (version 2) |
PBcR, Quiver, FinisherSC, Hi-C |
PacBio, Hi-C |