EWM21034.1, cds9639 (CDS) Nannochloropsis gaditana

Overview
NameEWM21034.1
Unique Namecds9639
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:110383..111197 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21034.1
Productankyrin unc44
Partialtrue
Orig transcript idgnl|cribi|Naga_100422g4.3148.mrna
GbkeyCDS
End range.
End range111197
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:110383..111197 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|585101042|gb|EWM21034.1| (ankyrin unc44, partial [Nannochloropsis gaditana])

HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
Query:    1 MMSSLLAISSRALALALAPSFLLLLTGPSNLLPPDHARVIFSASIARIGGNQSALATLVSQALLHYPDAVHAPPDFDVWPWVPPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEARVGGRAGRREGGREGGREGGRKVGREGGRE 271
            MMSSLLAISSRALALALAPSFLLLLTGPSNLLPPDHARVIFSASIARIGGNQSALATLVSQALLHYPDAVHAPPDFDVWPWVPPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEARVGGRAGRREGGREGGREGGRKVGREGGRE
Sbjct:    1 MMSSLLAISSRALALALAPSFLLLLTGPSNLLPPDHARVIFSASIARIGGNQSALATLVSQALLHYPDAVHAPPDFDVWPWVPPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEARVGGRAGRREGGREGGREGGRKVGREGGRE 271          
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|1181424790|ref|WP_084720345.1| (hypothetical protein [Thermus brockianus])

HSP 1 Score: 72.0182 bits (175), Expect = 1.214e-10
Identity = 65/189 (34.39%), Postives = 88/189 (46.56%), Query Frame = 0
Query:   72 APPDFDVWPWVPPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQA---VREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPL-------------------DIDAQDARGASALHLACRRDRAEVVSLLLAAGAS 238
            A P++D   +  PL  A+  G VE+ +VLL+ GADP            QD+         EGETP +VA + G+   VR L  V A   VR++EG    T L  A+  GH  VVR LLA    P++   +   P L                   D + +D  G + LH+A R   A+VV +LLAAGA 
Sbjct:   66 ADPNYDSLLYGGPLHLAAKKGYVEIAQVLLEMGADP----------NVQDR---------EGETPLHVAVEEGHAEFVRILVGVGADPNVRDREGE---TPLHVAAREGHAKVVRILLAAGADPNVWDRKGETPLLKAAREGHAEVVRILVGAGADPNVRDREGETPLHVAAREGHAKVVRILLAAGAD 232          
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|1059207996|ref|XP_017766525.1| (PREDICTED: ankyrin repeat and death domain-containing protein 1A-like [Eufriesea mexicana])

HSP 1 Score: 68.5514 bits (166), Expect = 1.695e-9
Identity = 53/194 (27.32%), Postives = 92/194 (47.42%), Query Frame = 0
Query:   75 DFDVWPWVPPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRL----GDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLY----------------------APHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEAR 242
            D D    VPP+  A++ GN E+ E+L+QA  D            ++DK G R         P ++A + G+   V+ L     +V AV +++    +T LM A++G +V VV YL   +                        P + ++ S +P ++I+A D +G + +H AC R+  E V +L+  GA+++A+
Sbjct:   60 DVDSRNNVPPIHWAASKGNTEIIEMLIQAKCDI----------EARDKFGMR---------PLHMAARYGHRDAVKMLINAGANVSAVNKKQ----HTLLMCAAQGNNVRVVEYLAEAVELLNGDATDITGATALHHAASAGHPTMITALSNVPRIEINATDKKGQTPIHSACEREHLEAVEVLIGLGANVDAQ 230          
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|123473660|ref|XP_001320017.1| (hypothetical protein [Trichomonas vaginalis G3] >gi|121902813|gb|EAY07794.1| hypothetical protein TVAG_000780 [Trichomonas vaginalis G3])

HSP 1 Score: 66.6254 bits (161), Expect = 1.729e-9
Identity = 45/164 (27.44%), Postives = 78/164 (47.56%), Query Frame = 0
Query:   83 PPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEARVGGR 246
             PL++AS GG++E+ E L+  GAD                   +  +  +G TP   A + G+  VV+ L  ++A +E +    +T L++ASE GH+ VV+YL++                 + +A++  G + L  A  R   EVV  L++ G + +A+   R
Sbjct:   86 TPLIYASTGGHLEVVEYLISVGAD-------------------KEAKNNDGSTPLIYASREGHIEVVKYLISIRANKETQNYTGSTPLISASERGHLEVVQYLIS--------------DGCNKEAKNNDGWTPLIFASERGHLEVVKYLISVGCNKDAKTKKR 216          
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|1129202811|gb|OLQ05545.1| (Ankyrin-3 [Symbiodinium microadriaticum])

HSP 1 Score: 68.5514 bits (166), Expect = 2.301e-9
Identity = 64/192 (33.33%), Postives = 78/192 (40.62%), Query Frame = 0
Query:   72 APPDFDVWPWVPPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLE-ARVGGRAGRREGGREGGREGGR 262
            A PD         L  AS+ G+VE+  +LL+AGADP   + RH +                G T   +A   GY  VVR L +  A      +   T LM AS GGHV +VR LL                  D    D    +AL  AC +   EVV LLL AGA+ E A  GG         EG  E  R
Sbjct: 1246 ADPDLTYDERFTALTMASSTGHVEVVRLLLEAGADPDLFTIRHDN----------------GSTALTMASSAGYVEVVRLLLEAGAGANVANKYGTTALMLASAGGHVEIVRLLLE--------------AGADTKLTDGEDVTALMFACTQGFVEVVRLLLEAGANTELADEGGFTALTRASAEGHVEVVR 1407          
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|123475176|ref|XP_001320767.1| (ankyrin repeat protein [Trichomonas vaginalis G3] >gi|121903579|gb|EAY08544.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3])

HSP 1 Score: 68.1662 bits (165), Expect = 2.420e-9
Identity = 51/179 (28.49%), Postives = 77/179 (43.02%), Query Frame = 0
Query:   81 WVPPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDG--------------DRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEARVGG 245
            W P L+ AS  GN+E+ + L+  GAD          P     D               D+  +  +G TP + A + G+  VV+ L  V A +E +    +T L+ AS  GH+  V+YL++                 D +A+D  G + L  A   D  EVV  L++ GA  EA+V  
Sbjct:  235 WTP-LIWASDNGNLEVVKYLISVGADKEAKDNNGWTPLIWASDNGNLEVVKYLISVGADKEAKDNDGWTPLFCASRNGHLEVVKCLISVGADKEAKDHFGSTPLIFASRHGHLEFVKYLISV--------------GADKEAKDKDGCTPLIYASENDHLEVVKYLISVGADKEAKVNN 398          

HSP 2 Score: 62.3882 bits (150), Expect = 1.791e-7
Identity = 58/193 (30.05%), Postives = 85/193 (44.04%), Query Frame = 0
Query:   75 DFDVWPWVPPLLHASAGGNVELTEVLLQAGAD----------PLRGSRRH-------------RDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTN--TGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEAR 242
            D D W    PL  AS  G++E+ + L+  GAD          PL  + RH              D  ++DKDG          TP   A +  +  VV+ L  V A  ++E +V N  T L+ AS+ GH+ VV+YL++                 D +A+D  G++ L  A R    EVV  L++ GA  EA+
Sbjct:  297 DNDGWT---PLFCASRNGHLEVVKCLISVGADKEAKDHFGSTPLIFASRHGHLEFVKYLISVGADKEAKDKDG---------CTPLIYASENDHLEVVKYLISVGA--DKEAKVNNGSTPLIYASDNGHLEVVKYLISV--------------GADKEAKDKDGSTPLIFASREGHLEVVKYLISVGADKEAK 461          
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|123415121|ref|XP_001304626.1| (ankyrin repeat protein [Trichomonas vaginalis G3] >gi|121886092|gb|EAX91696.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3])

HSP 1 Score: 68.1662 bits (165), Expect = 2.718e-9
Identity = 53/184 (28.80%), Postives = 81/184 (44.02%), Query Frame = 0
Query:   83 PPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDG------------------------DRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEAR 242
             PL+ AS  G++E  + L+  GAD            ++DKDG                        D+  +  +G TP   A   G+  VV+ L  V A +E + +  NT L+ ASE GH+ VV+YL++                 D +A+D  G++ L  A R  R EVV  L++ GA  +A+
Sbjct:  503 TPLIFASRYGHLEFVKYLISVGADK----------EAKDKDGNTPLIFASEYGRLEVVKYLISVGADKEAKDKDGWTPLIFASDNGHLEVVKYLISVGADKEAKDKDGNTPLIYASENGHLEVVKYLIS--------------NGADKEAKDNYGSTPLIFASRYGRLEVVKYLISVGADKDAK 662          

HSP 2 Score: 66.6254 bits (161), Expect = 7.388e-9
Identity = 52/184 (28.26%), Postives = 80/184 (43.48%), Query Frame = 0
Query:   83 PPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDG------------------------DRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEAR 242
             PL++AS  G +E+ + L+  GAD            ++DKDG                        D+  +  +G TP     + G+  VV+ L  V A +E + +  NT L+ ASE GH+ VV+YL++                 D +A+D  G + L  A R    EVV  L++ GA  EA+
Sbjct:  239 TPLIYASENGYLEVVKYLISVGADK----------EAKDKDGYTPLIFASRYGHLEFVKYFISVGADKEAKDKDGNTPLIYESRYGHLEVVKYLISVGADKEAKDKDGNTPLIYASENGHLEVVKYLISV--------------GADKEAKDKDGCTPLIYASRYGHLEVVKYLISVGADKEAK 398          

HSP 3 Score: 63.5438 bits (153), Expect = 8.383e-8
Identity = 56/203 (27.59%), Postives = 89/203 (43.84%), Query Frame = 0
Query:   83 PPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDG------------------------DRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLAC----------LYAPHLPSSR-------SRLPPL--DIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEAR 242
             PL++AS  G++E+ + L+  GAD            ++DKDG                        D+  +  +G TP   A + G+   V+ L  V A +E + +  NT L+ ASE G++ VV+YL++            Y P + +SR         L  +  D +A+D  G + L  A    R EVV  L++ GA  EA+
Sbjct:  371 TPLIYASRYGHLEVVKYLISVGADK----------EAKDKDGNTPLIFASRYGHLEFVKYLISVGADKEAKDKDGNTPLIFASRYGHLEFVKYLISVGADKEAKDKDGNTPLIYASENGYLEVVKYLISVGADKEAKDKDGYTPLIFASRYGHLEFVKYLISVGADKEAKDKDGNTPLIFASEYGRLEVVKYLISVGADKEAK 563          

HSP 4 Score: 61.2326 bits (147), Expect = 5.580e-7
Identity = 48/160 (30.00%), Postives = 74/160 (46.25%), Query Frame = 0
Query:   83 PPLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEAR 242
             PL++AS  G++E+ + L+  GAD            ++DKDG          TP   A + G+  VV+ L  V A +E + +  NT L+ AS  GH+  V+YL++                 D +A+D  G + L  A R    E V  L++ GA  EA+
Sbjct:  338 TPLIYASENGHLEVVKYLISVGADK----------EAKDKDG---------CTPLIYASRYGHLEVVKYLISVGADKEAKDKDGNTPLIFASRYGHLEFVKYLISV--------------GADKEAKDKDGNTPLIFASRYGHLEFVKYLISVGADKEAK 464          
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|514685124|ref|XP_004990141.1| (hypothetical protein PTSG_08757 [Salpingoeca rosetta] >gi|326432095|gb|EGD77665.1| hypothetical protein PTSG_08757 [Salpingoeca rosetta])

HSP 1 Score: 68.1662 bits (165), Expect = 2.729e-9
Identity = 54/181 (29.83%), Postives = 74/181 (40.88%), Query Frame = 0
Query:   88 ASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPL-------------------DIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEARVGGRAGR 249
            ASA G+  +   L++ GAD  R +                    EG TP Y+ACQ G+E VVR L + +A   Q      T L  AS  GH  VVRYL+      H  ++    P                     D+   D  G + LH+AC ++R  VV  LL  GA+   + G   G+
Sbjct:   50 ASAFGHEAVVRYLVEQGADVNRAA-------------------NEGATPLYIACQNGHEAVVRYLVEQRADVHQAMNDGTTPLWTASFNGHEAVVRYLVEQRADVHQANNNGTTPLYIACQNGHEAVVRYLAEQGADVYKADKDGWTPLHIACHQNRLRVVRTLLQLGANPTVKTGWLFGK 211          
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|347826715|emb|CCD42412.1| (hypothetical protein BofuT4_P074950.1 [Botrytis cinerea T4])

HSP 1 Score: 66.6254 bits (161), Expect = 2.992e-9
Identity = 55/179 (30.73%), Postives = 86/179 (48.04%), Query Frame = 0
Query:   75 DFDVWPW-VPPLLHASAGGNVELTEVLLQAGADP---LRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEARVGGRAGR 249
            D +VW   + PL+ A    +V+ T++LL+AGAD    L+G                      GET  ++A + G   +V+ L + +A  E      NT L++AS  GH   ++YLL                  DI+A+D +G++AL LACR D  E V +L+ + A++  RV  + GR
Sbjct:   96 DVNVWSQHITPLIAAVQTHHVKTTDLLLEAGADTSMTLKG----------------------GETVLHIAARIGDLEMVKLLVEYEAYLEARDGWGNTPLLSASRWGHPHTIKYLLE--------------KGADIEARDMKGSTALLLACRHDCVEAVKVLIHSDANV--RVKDKKGR 236          
BLAST of EWM21034.1 vs. NCBI_GenBank
Match: gi|1207986727|ref|XP_021343112.1| (ankyrin repeat domain-containing protein 17-like isoform X2 [Mizuhopecten yessoensis] >gi|1205813005|gb|OWF35158.1| Ankyrin repeat domain-containing protein 17 [Mizuhopecten yessoensis])

HSP 1 Score: 68.1662 bits (165), Expect = 3.535e-9
Identity = 51/160 (31.87%), Postives = 72/160 (45.00%), Query Frame = 0
Query:   84 PLLHASAGGNVELTEVLLQAGADPLRGSRRHRDPPSQDKDGDRVGRGGEGETPFYVACQGGYEGVVRRLGDVQAVREQEGRVTNTGLMAASEGGHVGVVRYLLACLYAPHLPSSRSRLPPLDIDAQDARGASALHLACRRDRAEVVSLLLAAGASLEARV 243
            PL+ A++GG V++ ++L+  GAD                      +   G TP + A  GGYE VV+ L D  A  EQ     +T LM ++  GHVGV R LL+     +  S+  +              SAL LAC +   E+V  LL AGA  E + 
Sbjct:  241 PLMEAASGGYVDIVKLLITHGAD-------------------VNAQSSAGNTPLHYAACGGYEDVVQVLIDAGANVEQHNENGHTPLMESASAGHVGVARILLSSGAGINTHSNEFK-------------ESALTLACYKGHLEMVKFLLEAGADQEHKT 368          
The following BLAST results are available for this feature:
BLAST of EWM21034.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101042|gb|EWM21034.1|0.000e+0100.00ankyrin unc44, partial [Nannochloropsis gaditana][more]
gi|1181424790|ref|WP_084720345.1|1.214e-1034.39hypothetical protein [Thermus brockianus][more]
gi|1059207996|ref|XP_017766525.1|1.695e-927.32PREDICTED: ankyrin repeat and death domain-contain... [more]
gi|123473660|ref|XP_001320017.1|1.729e-927.44hypothetical protein [Trichomonas vaginalis G3] >g... [more]
gi|1129202811|gb|OLQ05545.1|2.301e-933.33Ankyrin-3 [Symbiodinium microadriaticum][more]
gi|123475176|ref|XP_001320767.1|2.420e-928.49ankyrin repeat protein [Trichomonas vaginalis G3] ... [more]
gi|123415121|ref|XP_001304626.1|2.718e-928.80ankyrin repeat protein [Trichomonas vaginalis G3] ... [more]
gi|514685124|ref|XP_004990141.1|2.729e-929.83hypothetical protein PTSG_08757 [Salpingoeca roset... [more]
gi|347826715|emb|CCD42412.1|2.992e-930.73hypothetical protein BofuT4_P074950.1 [Botrytis ci... [more]
gi|1207986727|ref|XP_021343112.1|3.535e-931.88ankyrin repeat domain-containing protein 17-like i... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9670rna9670Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications