EWM22294.1, cds8378 (CDS) Nannochloropsis gaditana

Overview
NameEWM22294.1
Unique Namecds8378
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:584615..585034 +

Link to JBrowse

Properties
Property NameValue
Start range584615
Start range.
Protein idEWM22294.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100933g1.1611.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:584615..585034 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|585102775|gb|EWM22294.1| (hypothetical protein Naga_100933g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 278.87 bits (712), Expect = 6.111e-95
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
Query:    1 SPAPSFQVTAWWDQHKPAYFKPKPRADGSLPPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKTMPE 139
            SPAPSFQVTAWWDQHKPAYFKPKPRADGSLPPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKTMPE
Sbjct:    1 SPAPSFQVTAWWDQHKPAYFKPKPRADGSLPPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKTMPE 139          
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|1173926348|gb|OQR80617.1| (hypothetical protein ACHHYP_17415 [Achlya hypogyna])

HSP 1 Score: 82.4185 bits (202), Expect = 5.078e-17
Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 0
Query:   31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
            P  +  +++ +G PFLVWW TL+      ++ G     FG   DA+ L R  G+DK VDL  + P  GN+ +A+  NE+LE VRFP  L T     R W +VR +
Sbjct:   69 PGKFMAVIQANGLPFLVWWTTLYGASGFTIYYGLSSGWFGGS-DAVDLIRGLGLDKYVDLESLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWAKVRNQ 172          
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|1173952634|gb|OQS00267.1| (hypothetical protein THRCLA_06079 [Thraustotheca clavata])

HSP 1 Score: 80.4925 bits (197), Expect = 2.270e-16
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
Query:   31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
            P  +  +++ +G PFLVWW TL+      ++ G     FG   DA+ L R  G+D  +DL  + P  GN+ +A+  NE+LE VRFP  L T     R W +VR +
Sbjct:   70 PGKFMAMIQANGLPFLVWWTTLYGASGFTIYYGLSRGWFGGS-DAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWTKVRNQ 173          
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|669139286|ref|XP_008605211.1| (hypothetical protein SDRG_01464 [Saprolegnia diclina VS20] >gi|530743255|gb|EQC41497.1| hypothetical protein SDRG_01464 [Saprolegnia diclina VS20])

HSP 1 Score: 79.337 bits (194), Expect = 4.649e-16
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
Query:   31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
            P  +  +++ +G PFLVWW TL+      ++ G     FG   DA+ L R  G+D  +DL  + P  GN+ +A+  NE+LE VRFP  L T     R W +VR +
Sbjct:   57 PGKFMAVIQANGLPFLVWWTTLYGATGFTIYYGLSRGWFGGS-DAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWAKVRNQ 160          
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|813109019|ref|XP_012194438.1| (hypothetical protein SPRG_00832 [Saprolegnia parasitica CBS 223.65] >gi|641541008|gb|KDO34771.1| hypothetical protein SPRG_00832 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 79.7221 bits (195), Expect = 6.069e-16
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
Query:   31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
            P  +  +++ +G PFLVWW TL+      ++ G     FG   DA+ L R  G+D  +DL  + P  GN+ +A+  NE+LE VRFP  L T     R W +VR +
Sbjct:   72 PGKFMAVIQANGLPFLVWWTTLYGATGFTIYYGLSRGWFGGS-DAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWAKVRNQ 175          
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|669171605|ref|XP_008621151.1| (hypothetical protein SDRG_16711 [Saprolegnia diclina VS20] >gi|530727181|gb|EQC25423.1| hypothetical protein SDRG_16711 [Saprolegnia diclina VS20])

HSP 1 Score: 79.7221 bits (195), Expect = 6.069e-16
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
Query:   31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
            P  +  +++ +G PFLVWW TL+      ++ G     FG   DA+ L R  G+D  +DL  + P  GN+ +A+  NE+LE VRFP  L T     R W +VR +
Sbjct:   72 PGKFMAVIQANGLPFLVWWTTLYGATGFTIYYGLSRGWFGGS-DAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWAKVRNQ 175          
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|585102779|gb|EWM22297.1| (hypothetical protein Naga_101653g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 77.7962 bits (190), Expect = 1.147e-14
Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   33 SWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTV 122
            +W EL + +GP FLV+W  +W+L    ++   E       VD L LARA  +D ++DL  + PS GN+ VAI  NEV+E+VRFP  L TV
Sbjct:  143 TWKELFKKYGPAFLVYWNGVWILSGITIYAALEL----GGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLATV 228          
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|698784353|ref|XP_009825220.1| (hypothetical protein H257_03022 [Aphanomyces astaci] >gi|574119723|gb|ETV85202.1| hypothetical protein H257_03022 [Aphanomyces astaci])

HSP 1 Score: 69.707 bits (169), Expect = 4.855e-12
Identity = 33/100 (33.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:   37 LVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKT 136
            +V+ +G PF++WW TL+     G++   E    G   DA+ L ++ G+D+ +D+  + P+ GN+ +A+  NE+LE VR PL + T     R +    GK 
Sbjct:   85 MVQENGLPFVLWWVTLYGSSGVGIYYALEAGYIGGG-DAIHLIQSLGLDQYIDIEKLNPTYGNIAIAVLMNEILEAVRLPLCIATTPLIKRAFLSATGKN 183          
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|673027428|ref|XP_008867675.1| (hypothetical protein H310_04908 [Aphanomyces invadans] >gi|574476448|gb|ETW03446.1| hypothetical protein H310_04908 [Aphanomyces invadans])

HSP 1 Score: 69.3218 bits (168), Expect = 4.978e-12
Identity = 33/100 (33.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:   37 LVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKT 136
            +V+ +G PF+VWW TL+     G++   E    G   DA+ + ++ G+D+ +D   + P+ GN+ +A+  NE+LE VR PL + T     R +    GK+
Sbjct:   81 MVQENGLPFVVWWVTLYGSCGVGIYYALEAGYIGGG-DAIHMIQSLGLDQYIDTEKLNPTYGNIAIAVLLNEILETVRLPLCIATTPMIKRAYLNATGKS 179          
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|1072222731|gb|OEU07490.1| (hypothetical protein FRACYDRAFT_250908 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 65.0846 bits (157), Expect = 1.590e-10
Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 0
Query:   42 GPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKP 124
            G PFL WW  +WV+   G++ G E  LFG DV  + L      +  +D S V P  GN+  A+A NE++E +RFP  LLT KP
Sbjct:   64 GMPFLAWWTGVWVVTGVGIYSGME--LFGIDVLGM-LQTTLPSNNYIDFSKVDPKTGNVMTAVAINELIEPIRFPFVLLTAKP 143          
The following BLAST results are available for this feature:
BLAST of EWM22294.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102775|gb|EWM22294.1|6.111e-95100.00hypothetical protein Naga_100933g1, partial [Nanno... [more]
gi|1173926348|gb|OQR80617.1|5.078e-1739.05hypothetical protein ACHHYP_17415 [Achlya hypogyna... [more]
gi|1173952634|gb|OQS00267.1|2.270e-1637.14hypothetical protein THRCLA_06079 [Thraustotheca c... [more]
gi|669139286|ref|XP_008605211.1|4.649e-1637.14hypothetical protein SDRG_01464 [Saprolegnia dicli... [more]
gi|813109019|ref|XP_012194438.1|6.069e-1637.14hypothetical protein SPRG_00832 [Saprolegnia paras... [more]
gi|669171605|ref|XP_008621151.1|6.069e-1637.14hypothetical protein SDRG_16711 [Saprolegnia dicli... [more]
gi|585102779|gb|EWM22297.1|1.147e-1444.44hypothetical protein Naga_101653g2, partial [Nanno... [more]
gi|698784353|ref|XP_009825220.1|4.855e-1233.00hypothetical protein H257_03022 [Aphanomyces astac... [more]
gi|673027428|ref|XP_008867675.1|4.978e-1233.00hypothetical protein H310_04908 [Aphanomyces invad... [more]
gi|1072222731|gb|OEU07490.1|1.590e-1043.37hypothetical protein FRACYDRAFT_250908 [Fragilario... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8405rna8405Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications