EWM24251.1, cds6447 (CDS) Nannochloropsis gaditana

No biomaterial libraries express this feature.
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|585105642|gb|EWM24251.1| (60s ribosomal protein l17-2 [Nannochloropsis gaditana])

HSP 1 Score: 379.022 bits (972), Expect = 3.595e-133
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKKEPGAPKLTRKQAARVRVGGGN 182
            MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKKEPGAPKLTRKQAARVRVGGGN
Sbjct:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKKEPGAPKLTRKQAARVRVGGGN 182
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|669154604|ref|XP_008612864.1| (50S ribosomal protein L22 [Saprolegnia diclina VS20] >gi|813148856|ref|XP_012200075.1| 50S ribosomal protein L22 [Saprolegnia parasitica CBS 223.65] >gi|530735399|gb|EQC33641.1| 50S ribosomal protein L22 [Saprolegnia diclina VS20] >gi|641535310|gb|KDO29228.1| 50S ribosomal protein L22 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 248.825 bits (634), Expect = 1.333e-81
Identity = 122/185 (65.95%), Postives = 149/185 (80.54%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPV-KKEPGAP-KLTRKQAARVRV--GGG 181
            M  YS+E +D +++AK+RGSHLRVHFKH REV HTI G  VGKAK+FLE VL+ K AVPFT+F GG+GRHAQGK L+ PG +C WPQKATKI+LD++ NAE+NAE+KG+DTD LYI H Q N A KQRRRTYRAHGRI PYMS+PAH+E+ILTEK   V K E  AP K++RK+ A++R+  GGG
Sbjct:    1 MPSYSQEPEDQSRSAKSRGSHLRVHFKHCREVCHTIKGLPVGKAKKFLEAVLEKKAAVPFTKFTGGVGRHAQGKTLNAPGDKCRWPQKATKIILDLVKNAEANAELKGLDTDKLYIAHTQANAAIKQRRRTYRAHGRIGPYMSNPAHIELILTEKKENVAKAEDAAPAKISRKRNAQLRLKSGGG 185
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|1173945191|gb|OQR93850.1| (60S ribosomal protein L17-2 [Achlya hypogyna])

HSP 1 Score: 247.284 bits (630), Expect = 6.112e-81
Identity = 120/185 (64.86%), Postives = 148/185 (80.00%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKK--EPGAPKLTRKQAARVRV--GGG 181
            M  YS+E +D +++AK+RGSHLRVHFKH REV HTI G  V KAK+FLE VL+ K AVPFT+F GG+GRHAQGK L+ PG +C WPQKATKI+LD++ NAE+NAE+KG+DT+ LYI H Q N A KQRRRTYRAHGRI PYMS+PAH+EIILTEK   V K  +  APK++RK+ A++R+  GGG
Sbjct:    1 MPSYSQEPEDQSRSAKSRGSHLRVHFKHCREVCHTINGLPVVKAKKFLEAVLEKKAAVPFTKFTGGVGRHAQGKSLNAPGDKCRWPQKATKIILDLVKNAEANAELKGLDTEKLYIAHTQANAAIKQRRRTYRAHGRIGPYMSNPAHIEIILTEKKENVAKAEDAAAPKVSRKRNAQLRLKSGGG 185
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|298709755|emb|CBJ31558.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 247.669 bits (631), Expect = 7.698e-81
Identity = 127/207 (61.35%), Postives = 151/207 (72.95%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKL-----------------------LSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKKEPGAPKLTRKQAAR---VRVGGG 181
            MV+YS+EI+   K+AKARGS+LRVHFKH+REV+H I G ++ KAK +L+DVL+YKRAVPFT F GG+GRHAQGKL                          PGS+C WPQKAT+IVLD++ NAESNAE K +D D+LYIVH Q NRAPKQRRRTYRAHGRINPYMSSPAH+E+IL+EK V VKK     K TRKQ A+   V+ GGG
Sbjct:    1 MVQYSKEIEG-TKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYMGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDSLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPKKPTRKQVAKTRFVKAGGG 206
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|695375132|ref|XP_009515467.1| (hypothetical protein PHYSODRAFT_284211 [Phytophthora sojae] >gi|348688378|gb|EGZ28192.1| hypothetical protein PHYSODRAFT_284211 [Phytophthora sojae])

HSP 1 Score: 243.817 bits (621), Expect = 1.163e-79
Identity = 122/186 (65.59%), Postives = 145/186 (77.96%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKK--EPGAP-KLTRKQAARVRV--GGG 181
            M  YS+E +D  +AAKARGSHLRVHFKH REVSH I G  + KAK FL+ VL+YK+AVPFT+F GG GRHAQGKL    G +C WPQKATKI+LD++ NAE+NAEVKG+DTD LYI HAQ N A KQRRRTYRAHGRI PYMS+PAH+E+ILTEK   V K  E   P K++RK+ A++R+  GGG
Sbjct:    1 MPSYSQEPEDAQRAAKARGSHLRVHFKHCREVSHAIKGMPLNKAKSFLQAVLEYKQAVPFTKFTGGCGRHAQGKLRGAAGDKCKWPQKATKIILDLVKNAEANAEVKGLDTDLLYISHAQANAAIKQRRRTYRAHGRIGPYMSNPAHIELILTEKRANVAKAAEEAKPVKVSRKRQAQLRLKSGGG 186
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|301117396|ref|XP_002906426.1| (60S ribosomal protein L17-2 [Phytophthora infestans T30-4] >gi|675205223|ref|XP_008911496.1| ribosomal protein L22 [Phytophthora parasitica INRA-310] >gi|262107775|gb|EEY65827.1| 60S ribosomal protein L17-2 [Phytophthora infestans T30-4] >gi|566014731|gb|ETI37642.1| ribosomal protein L22 [Phytophthora parasitica P1569] >gi|567952228|gb|ETK77908.1| ribosomal protein L22 [Phytophthora parasitica] >gi|567980891|gb|ETL31341.1| ribosomal protein L22 [Phytophthora parasitica] >gi|568010372|gb|ETL84560.1| ribosomal protein L22 [Phytophthora parasitica] >gi|568040240|gb|ETM37700.1| ribosomal protein L22 [Phytophthora parasitica] >gi|568043162|gb|ETM40459.1| ribosomal protein L22 [Phytophthora parasitica] >gi|568088090|gb|ETN02952.1| ribosomal protein L22 [Phytophthora parasitica INRA-310] >gi|570318488|gb|ETO66436.1| ribosomal protein L22 [Phytophthora parasitica P1976] >gi|570942294|gb|ETP07551.1| ribosomal protein L22 [Phytophthora parasitica CJ01A1] >gi|570972801|gb|ETP35579.1| ribosomal protein L22 [Phytophthora parasitica P10297] >gi|970650174|gb|KUF89268.1| Fructose 1 [Phytophthora nicotianae])

HSP 1 Score: 243.817 bits (621), Expect = 1.563e-79
Identity = 122/186 (65.59%), Postives = 145/186 (77.96%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKK--EPGAP-KLTRKQAARVRV--GGG 181
            M  YS+E +D  +AAKARGSHLRVHFKH REVSH I G  + KAK FL+ VL+YK+AVPFT+F GG GRHAQGKL    G +C WPQKATKI+LD++ NAE+NAEVKG+DTD LYI HAQ N A KQRRRTYRAHGRI PYMS+PAH+E+ILTEK   V K  E   P K++RK+ A++R+  GGG
Sbjct:    1 MPSYSQEPEDAQRAAKARGSHLRVHFKHCREVSHAIKGMPLNKAKSFLQAVLEYKQAVPFTKFTGGCGRHAQGKLRGAAGDKCKWPQKATKIILDLVKNAEANAEVKGLDTDLLYISHAQANAAIKQRRRTYRAHGRIGPYMSNPAHIELILTEKRANVAKAVEEAKPVKVSRKRQAQLRLKSGGG 186
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|673031214|ref|XP_008869568.1| (ribosomal protein L22 [Aphanomyces invadans] >gi|574474719|gb|ETW01720.1| ribosomal protein L22 [Aphanomyces invadans])

HSP 1 Score: 244.588 bits (623), Expect = 2.038e-79
Identity = 119/185 (64.32%), Postives = 146/185 (78.92%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKK--EPGAPKLTRKQAA--RVRVGGG 181
            M  YS+E +D N +AKARG HLRVH+KH REV HTI G+ + KAK+FL DVL++K AVPFT++ GG GRHAQGKLL+ PG +C WPQKAT+I+LD++ NAE+NAE+KG+DT  LYI HAQ N A KQRRRTYRAHGRI PYM++PAH+E+ILTEK   V K  EP   KLTRK+ A  R++ GGG
Sbjct:   38 MPSYSQEPEDQNTSAKARGRHLRVHYKHCREVCHTIKGYSLAKAKKFLGDVLEFKAAVPFTKYTGGPGRHAQGKLLNAPGDKCRWPQKATRIILDLVKNAEANAELKGLDTAKLYIAHAQANMAIKQRRRTYRAHGRIGPYMANPAHIELILTEKKENVAKAEEPKTTKLTRKRQAVLRLKSGGG 222
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|1214713983|gb|OWZ24859.1| (60S ribosomal protein L17-2 [Phytophthora megakarya])

HSP 1 Score: 243.432 bits (620), Expect = 2.078e-79
Identity = 122/186 (65.59%), Postives = 145/186 (77.96%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKK--EPGAP-KLTRKQAARVRV--GGG 181
            M  YS+E +D  +AAKARGSHLRVHFKH REVSH I G  + KAK FL+ VL+YK+AVPFT+F GG GRHAQGKL    G +C WPQKATKI+LD++ NAE+NAEVKG+DTD LYI HAQ N A KQRRRTYRAHGRI PYMS+PAH+E+ILTEK   V K  E   P K++RK+ A++R+  GGG
Sbjct:    1 MPSYSQEPEDAQRAAKARGSHLRVHFKHCREVSHAIKGMPLNKAKTFLQAVLEYKQAVPFTKFTGGCGRHAQGKLRGAAGDKCKWPQKATKIILDLVKNAEANAEVKGLDTDLLYISHAQANAAIKQRRRTYRAHGRIGPYMSNPAHIELILTEKRANVAKAVEEAKPVKVSRKRQAQLRLKSGGG 186
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|698812672|ref|XP_009839365.1| (ribosomal protein L22 [Aphanomyces astaci] >gi|574105596|gb|ETV71119.1| ribosomal protein L22 [Aphanomyces astaci])

HSP 1 Score: 242.662 bits (618), Expect = 3.512e-79
Identity = 118/185 (63.78%), Postives = 145/185 (78.38%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKK--EPGAPKLTRKQAA--RVRVGGG 181
            M  YS+E +D N +AKARG HLRVH+KH REV HTI G+ + KAK+FL DVL++K AVPFT++ GG GRHAQGKLL+ PG +C WPQKAT+I+LD++ NAE+NAE+K +DT  LYI HAQ N A KQRRRTYRAHGRI PYM++PAH+E+ILTEK   V K  EP   KLTRK+ A  R++ GGG
Sbjct:    1 MPSYSQEPEDQNTSAKARGRHLRVHYKHCREVCHTIKGYSLVKAKKFLGDVLEFKAAVPFTKYTGGPGRHAQGKLLNAPGDKCRWPQKATRIILDLVKNAEANAELKELDTSKLYIAHAQANMAIKQRRRTYRAHGRIGPYMANPAHIELILTEKKDNVAKAEEPKTAKLTRKRQAVLRLKSGGG 185
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BLAST of EWM24251.1 vs. NCBI_GenBank
Match: gi|953496143|emb|CEG41743.1| (ribosomal protein l22 [Plasmopara halstedii])

HSP 1 Score: 241.891 bits (616), Expect = 8.163e-79
Identity = 120/186 (64.52%), Postives = 144/186 (77.42%), Query Frame = 0 
Query:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKLLSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKK---EPGAPKLTRKQAARVRV--GGG 181
            M  YS+E +D  +AAKARGSHLRVHFKH REV+H I G  + KAK FL+ VL+YK+AVPFT+F GG GRHAQGKL    G +C WPQKATKI+LD++ NAE+NAEVKG+DTD LYI HAQ N A KQRRRTYRAHGRI PYMS+PAH+E+ILTEK   V K   E    K++RK+ A++R+  GGG
Sbjct:    1 MPSYSQEPEDAQRAAKARGSHLRVHFKHCREVTHAIKGMPLNKAKSFLQAVLEYKQAVPFTKFTGGCGRHAQGKLRGAAGDKCKWPQKATKIILDLVKNAEANAEVKGLDTDLLYISHAQANTAIKQRRRTYRAHGRIGPYMSNPAHIELILTEKRANVAKAVEETKPVKVSRKRQAQLRLKSGGG 186
The following BLAST results are available for this feature:
BLAST of EWM24251.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105642|gb|EWM24251.1|3.595e-133100.0060s ribosomal protein l17-2 [Nannochloropsis gadit... [more]
gi|669154604|ref|XP_008612864.1|1.333e-8165.9550S ribosomal protein L22 [Saprolegnia diclina VS2... [more]
gi|1173945191|gb|OQR93850.1|6.112e-8164.8660S ribosomal protein L17-2 [Achlya hypogyna][more]
gi|298709755|emb|CBJ31558.1|7.698e-8161.35conserved unknown protein [Ectocarpus siliculosus][more]
gi|695375132|ref|XP_009515467.1|1.163e-7965.59hypothetical protein PHYSODRAFT_284211 [Phytophtho... [more]
gi|301117396|ref|XP_002906426.1|1.563e-7965.5960S ribosomal protein L17-2 [Phytophthora infestan... [more]
gi|673031214|ref|XP_008869568.1|2.038e-7964.32ribosomal protein L22 [Aphanomyces invadans] >gi|5... [more]
gi|1214713983|gb|OWZ24859.1|2.078e-7965.5960S ribosomal protein L17-2 [Phytophthora megakary... [more]
gi|698812672|ref|XP_009839365.1|3.512e-7963.78ribosomal protein L22 [Aphanomyces astaci] >gi|574... [more]
gi|953496143|emb|CEG41743.1|8.163e-7964.52ribosomal protein l22 [Plasmopara halstedii][more]
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GO Assignments
This CDS is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005198 structural molecule activity
Analysis Name: InterPro analysis for N. gaditana B-31
Date Performed: 2020-04-06
IPR TermIPR DescriptionSourceSource TermSource Description
IPR001063Ribosomal protein L22/L17GENE3D3.90.470.10
IPR001063Ribosomal protein L22/L17PFAMPF00237Ribosomal_L22
IPR001063Ribosomal protein L22/L17SUPERFAMILY54843Ribosomal protein L22
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealTIGRFAMTIGR01038TIGR01038
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealPANTHERPTHR1159360S RIBOSOMAL PROTEIN L17
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealHAMAPMF_01331_ARibosomal_L22_A
IPR018260Ribosomal protein L22/L17, conserved sitePROSITEPS00464RIBOSOMAL_L22