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  ["analysis_id"]=>
  string(2) "50"
  ["blast_settings"]=>
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  ["adb_id"]=>
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  ["db_arr"]=>
  array(1) {
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      string(12) "NCBI_GenBank"
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      string(37) "https://www.ncbi.nlm.nih.gov/protein/"
      ["url"]=>
      string(0) ""
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  ["db"]=>
  object(stdClass)#255 (5) {
    ["db_id"]=>
    string(3) "100"
    ["name"]=>
    string(12) "NCBI_GenBank"
    ["description"]=>
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EWM24491.1, cds6182 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

EWM24491.1, cds6182 (CDS) Nannochloropsis gaditana

Overview
NameEWM24491.1
Unique Namecds6182
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:818371..818384 -
Alignment locationCM002467.1:817981..818326 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24491.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101876g2.9907.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:818371..818384 -
CM002467.1supercontigCM002467.1:817981..818326 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM24491.1 vs. NCBI_GenBank
Match: gi|585105973|gb|EWM24491.1| (hypothetical protein Naga_101876g2 [Nannochloropsis gaditana])

HSP 1 Score: 245.358 bits (625), Expect = 2.424e-82
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
Query:    1 MVGFELGREDVCVPSLFCKEAHRLQSDRAIERQDGRAWRGVTKRVMRREDHEGWYWHRGERSQPKRRGTGSHFIQSYFTEKTRASSSVLFGESMSEAFEMHGKRSHPEQDGGVQLIFWE 119
            MVGFELGREDVCVPSLFCKEAHRLQSDRAIERQDGRAWRGVTKRVMRREDHEGWYWHRGERSQPKRRGTGSHFIQSYFTEKTRASSSVLFGESMSEAFEMHGKRSHPEQDGGVQLIFWE
Sbjct:    1 MVGFELGREDVCVPSLFCKEAHRLQSDRAIERQDGRAWRGVTKRVMRREDHEGWYWHRGERSQPKRRGTGSHFIQSYFTEKTRASSSVLFGESMSEAFEMHGKRSHPEQDGGVQLIFWE 119          
The following BLAST results are available for this feature:
BLAST of EWM24491.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105973|gb|EWM24491.1|2.424e-82100.00hypothetical protein Naga_101876g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):
Feature NameUnique NameSpeciesType
rna6197rna6197Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications