array(7) {
  ["feature_id"]=>
  string(6) "563313"
  ["analysis_id"]=>
  string(2) "50"
  ["blast_settings"]=>
  NULL
  ["blastdb"]=>
  object(stdClass)#206 (11) {
    ["analysisprop_id"]=>
    string(4) "1808"
    ["analysis_id"]=>
    object(stdClass)#267 (12) {
      ["analysis_id"]=>
      string(2) "50"
      ["name"]=>
      string(35) "BLAST analysis for N. gaditana B-31"
      ["description"]=>
      string(67) "
Functional annotation for proteins of N. gaditana B-31.
"
      ["program"]=>
      string(6) "blastp"
      ["programversion"]=>
      string(14) "BLASTP 2.2.29+"
      ["algorithm"]=>
      string(0) ""
      ["sourcename"]=>
      string(16) "NagaB31-proteins"
      ["sourceversion"]=>
      string(0) ""
      ["sourceuri"]=>
      string(0) ""
      ["timeexecuted"]=>
      string(19) "2020-04-07 00:00:00"
      ["tablename"]=>
      string(8) "analysis"
      ["nid"]=>
      string(6) "755381"
    }
    ["type_id"]=>
    object(stdClass)#266 (8) {
      ["cvterm_id"]=>
      string(4) "5957"
      ["cv_id"]=>
      object(stdClass)#264 (4) {
        ["cv_id"]=>
        string(1) "5"
        ["name"]=>
        string(6) "tripal"
        ["definition"]=>
        string(128) "Terms used by Tripal for modules to manage data such as that stored in property tables::text like featureprop, analysisprop, etc"
        ["tablename"]=>
        string(2) "cv"
      }
      ["name"]=>
      string(22) "analysis_blast_blastdb"
      ["definition"]=>
      string(0) ""
      ["dbxref_id"]=>
      object(stdClass)#263 (6) {
        ["dbxref_id"]=>
        string(4) "8387"
        ["db_id"]=>
        object(stdClass)#261 (6) {
          ["db_id"]=>
          string(1) "2"
          ["name"]=>
          string(6) "tripal"
          ["description"]=>
          string(80) "Used as a database placeholder for tripal defined objects such as tripal cvterms"
          ["urlprefix"]=>
          NULL
          ["url"]=>
          NULL
          ["tablename"]=>
          string(2) "db"
        }
        ["accession"]=>
        string(22) "analysis_blast_blastdb"
        ["version"]=>
        string(0) ""
        ["description"]=>
        string(0) ""
        ["tablename"]=>
        string(6) "dbxref"
      }
      ["is_obsolete"]=>
      string(1) "0"
      ["is_relationshiptype"]=>
      string(1) "0"
      ["tablename"]=>
      string(6) "cvterm"
    }
    ["value"]=>
    string(3) "100"
    ["rank"]=>
    string(1) "0"
    ["expandable_fields"]=>
    array(0) {
    }
    ["expandable_foreign_keys"]=>
    array(0) {
    }
    ["expandable_tables"]=>
    array(153) {
      [0]=>
      string(15) "analysis_cvterm"
      [1]=>
      string(15) "analysis_dbxref"
      [2]=>
      string(15) "analysisfeature"
      [3]=>
      string(17) "analysis_organism"
      [4]=>
      string(12) "analysisprop"
      [5]=>
      string(12) "analysis_pub"
      [6]=>
      string(21) "analysis_relationship"
      [7]=>
      string(22) "nd_experiment_analysis"
      [8]=>
      string(9) "phylotree"
      [9]=>
      string(16) "project_analysis"
      [10]=>
      string(14) "quantification"
      [11]=>
      string(15) "acquisitionprop"
      [12]=>
      string(24) "acquisition_relationship"
      [13]=>
      string(15) "analysis_cvterm"
      [14]=>
      string(19) "analysisfeatureprop"
      [15]=>
      string(12) "analysisprop"
      [16]=>
      string(21) "analysis_relationship"
      [17]=>
      string(11) "arraydesign"
      [18]=>
      string(15) "arraydesignprop"
      [19]=>
      string(9) "assayprop"
      [20]=>
      string(15) "biomaterialprop"
      [21]=>
      string(24) "biomaterial_relationship"
      [22]=>
      string(21) "biomaterial_treatment"
      [23]=>
      string(16) "cell_line_cvterm"
      [24]=>
      string(20) "cell_line_cvtermprop"
      [25]=>
      string(13) "cell_lineprop"
      [26]=>
      string(22) "cell_line_relationship"
      [27]=>
      string(9) "chadoprop"
      [28]=>
      string(7) "contact"
      [29]=>
      string(11) "contactprop"
      [30]=>
      string(20) "contact_relationship"
      [31]=>
      string(7) "control"
      [32]=>
      string(6) "cvprop"
      [33]=>
      string(13) "cvterm_dbxref"
      [34]=>
      string(10) "cvtermpath"
      [35]=>
      string(10) "cvtermprop"
      [36]=>
      string(19) "cvterm_relationship"
      [37]=>
      string(13) "cvtermsynonym"
      [38]=>
      string(6) "dbprop"
      [39]=>
      string(10) "dbxrefprop"
      [40]=>
      string(7) "element"
      [41]=>
      string(20) "element_relationship"
      [42]=>
      string(26) "elementresult_relationship"
      [43]=>
      string(18) "environment_cvterm"
      [44]=>
      string(17) "expression_cvterm"
      [45]=>
      string(21) "expression_cvtermprop"
      [46]=>
      string(14) "expressionprop"
      [47]=>
      string(7) "feature"
      [48]=>
      string(14) "feature_cvterm"
      [49]=>
      string(18) "feature_cvtermprop"
      [50]=>
      string(22) "feature_expressionprop"
      [51]=>
      string(16) "feature_genotype"
      [52]=>
      string(10) "featuremap"
      [53]=>
      string(14) "featuremapprop"
      [54]=>
      string(14) "featureposprop"
      [55]=>
      string(11) "featureprop"
      [56]=>
      string(15) "feature_pubprop"
      [57]=>
      string(20) "feature_relationship"
      [58]=>
      string(24) "feature_relationshipprop"
      [59]=>
      string(8) "genotype"
      [60]=>
      string(12) "genotypeprop"
      [61]=>
      string(7) "library"
      [62]=>
      string(14) "library_cvterm"
      [63]=>
      string(22) "library_expressionprop"
      [64]=>
      string(19) "library_featureprop"
      [65]=>
      string(11) "libraryprop"
      [66]=>
      string(20) "library_relationship"
      [67]=>
      string(13) "nd_experiment"
      [68]=>
      string(22) "nd_experiment_analysis"
      [69]=>
      string(17) "nd_experimentprop"
      [70]=>
      string(19) "nd_experiment_stock"
      [71]=>
      string(23) "nd_experiment_stockprop"
      [72]=>
      string(18) "nd_geolocationprop"
      [73]=>
      string(11) "nd_protocol"
      [74]=>
      string(15) "nd_protocolprop"
      [75]=>
      string(19) "nd_protocol_reagent"
      [76]=>
      string(10) "nd_reagent"
      [77]=>
      string(14) "nd_reagentprop"
      [78]=>
      string(23) "nd_reagent_relationship"
      [79]=>
      string(8) "organism"
      [80]=>
      string(15) "organism_cvterm"
      [81]=>
      string(19) "organism_cvtermprop"
      [82]=>
      string(12) "organismprop"
      [83]=>
      string(21) "organism_relationship"
      [84]=>
      string(8) "phendesc"
      [85]=>
      string(9) "phenotype"
      [86]=>
      string(27) "phenotype_comparison_cvterm"
      [87]=>
      string(16) "phenotype_cvterm"
      [88]=>
      string(13) "phenotypeprop"
      [89]=>
      string(13) "phenstatement"
      [90]=>
      string(9) "phylonode"
      [91]=>
      string(13) "phylonodeprop"
      [92]=>
      string(22) "phylonode_relationship"
      [93]=>
      string(9) "phylotree"
      [94]=>
      string(13) "phylotreeprop"
      [95]=>
      string(11) "projectprop"
      [96]=>
      string(20) "project_relationship"
      [97]=>
      string(8) "protocol"
      [98]=>
      string(13) "protocolparam"
      [99]=>
      string(3) "pub"
      [100]=>
      string(7) "pubprop"
      [101]=>
      string(16) "pub_relationship"
      [102]=>
      string(18) "quantificationprop"
      [103]=>
      string(27) "quantification_relationship"
      [104]=>
      string(5) "stock"
      [105]=>
      string(15) "stockcollection"
      [106]=>
      string(19) "stockcollectionprop"
      [107]=>
      string(12) "stock_cvterm"
      [108]=>
      string(16) "stock_cvtermprop"
      [109]=>
      string(16) "stock_dbxrefprop"
      [110]=>
      string(13) "stock_feature"
      [111]=>
      string(16) "stock_featuremap"
      [112]=>
      string(9) "stockprop"
      [113]=>
      string(18) "stock_relationship"
      [114]=>
      string(25) "stock_relationship_cvterm"
      [115]=>
      string(15) "studydesignprop"
      [116]=>
      string(11) "studyfactor"
      [117]=>
      string(9) "studyprop"
      [118]=>
      string(17) "studyprop_feature"
      [119]=>
      string(7) "synonym"
      [120]=>
      string(9) "treatment"
      [121]=>
      string(6) "cvprop"
      [122]=>
      string(6) "cvterm"
      [123]=>
      string(10) "cvtermpath"
      [124]=>
      string(15) "analysis_dbxref"
      [125]=>
      string(11) "arraydesign"
      [126]=>
      string(5) "assay"
      [127]=>
      string(11) "biomaterial"
      [128]=>
      string(18) "biomaterial_dbxref"
      [129]=>
      string(16) "cell_line_dbxref"
      [130]=>
      string(6) "cvterm"
      [131]=>
      string(13) "cvterm_dbxref"
      [132]=>
      string(10) "dbxrefprop"
      [133]=>
      string(7) "element"
      [134]=>
      string(7) "feature"
      [135]=>
      string(21) "feature_cvterm_dbxref"
      [136]=>
      string(14) "feature_dbxref"
      [137]=>
      string(17) "featuremap_dbxref"
      [138]=>
      string(14) "library_dbxref"
      [139]=>
      string(20) "nd_experiment_dbxref"
      [140]=>
      string(26) "nd_experiment_stock_dbxref"
      [141]=>
      string(15) "organism_dbxref"
      [142]=>
      string(16) "phylonode_dbxref"
      [143]=>
      string(9) "phylotree"
      [144]=>
      string(14) "project_dbxref"
      [145]=>
      string(8) "protocol"
      [146]=>
      string(10) "pub_dbxref"
      [147]=>
      string(5) "stock"
      [148]=>
      string(12) "stock_dbxref"
      [149]=>
      string(5) "study"
      [150]=>
      string(6) "dbprop"
      [151]=>
      string(6) "dbxref"
      [152]=>
      string(18) "stockcollection_db"
    }
    ["expandable_nodes"]=>
    array(1) {
      [0]=>
      string(8) "analysis"
    }
    ["tablename"]=>
    string(12) "analysisprop"
    ["expanded"]=>
    string(18) "analysisprop.value"
  }
  ["adb_id"]=>
  string(3) "100"
  ["db_id"]=>
  NULL
  ["db_arr"]=>
  array(1) {
    [0]=>
    object(stdClass)#255 (5) {
      ["db_id"]=>
      string(3) "100"
      ["name"]=>
      string(12) "NCBI_GenBank"
      ["description"]=>
      string(0) ""
      ["urlprefix"]=>
      string(37) "https://www.ncbi.nlm.nih.gov/protein/"
      ["url"]=>
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    }
  }
}
EWM25311.1, cds5357 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

EWM25311.1, cds5357 (CDS) Nannochloropsis gaditana

Overview
NameEWM25311.1
Unique Namecds5357
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:824184..824483 -
Alignment locationCM002465.1:823680..824024 -
Alignment locationCM002465.1:822869..822934 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25311.1
Producttranscription regulatory protein
Orig transcript idgnl|cribi|Naga_100135g16.5868.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:824184..824483 -
CM002465.1supercontigCM002465.1:823680..824024 -
CM002465.1supercontigCM002465.1:822869..822934 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR027417P-loop_NTPase
IPR001650Helicase_C
Homology
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|585107066|gb|EWM25311.1| (transcription regulatory protein [Nannochloropsis gaditana])

HSP 1 Score: 480.33 bits (1235), Expect = 1.485e-171
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 
Query:    1 MREKELRQVVLSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYLLPPSSAPRLTTSNLLNQLRKVLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGDNKCGRQLQDVRPLMRIKAD 236
            MREKELRQVVLSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYLLPPSSAPRLTTSNLLNQLRKVLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGDNKCGRQLQDVRPLMRIKAD
Sbjct:    1 MREKELRQVVLSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYLLPPSSAPRLTTSNLLNQLRKVLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGDNKCGRQLQDVRPLMRIKAD 236
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|1098425533|gb|OII73658.1| (hypothetical protein cubi_03456 [Cryptosporidium ubiquitum])

HSP 1 Score: 171.785 bits (434), Expect = 2.481e-45
Identity = 101/228 (44.30%), Postives = 136/228 (59.65%), Query Frame = 0 
Query:   11 LSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYLLPPSSAPRLTTS---------------------NLLNQLRKVLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGD 217
            +S+EE+ L++ +LH VLRPFLLRR K QV + +P K E +L CPLS  Q+ LY+ LE+   +       L    + P L ++                     ++L +LR   G R LIFSQ T  L L+E F   R MP+ RLDG T ++ R E +  FN    + +  FL++T+AGG G+NLQ+ ADTVILFDSDWNPQ+D QA +R HRIGQ +EVL LR V+ D
Sbjct:  975 ISEEEQLLIVDRLHKVLRPFLLRREKIQVANEVPPKLEEILWCPLSGLQQYLYKELENNENSGPNVLMQLRKVCNHPFLFSTEIQYPSDESIVRVCGKFVMLDSILPKLRAA-GHRVLIFSQMTKLLTLLEVFLSLRNMPFLRLDGTTLSEDRQESLKLFN-AENSPYFVFLLSTKAGGFGINLQS-ADTVILFDSDWNPQNDEQAQSRAHRIGQKKEVLTLRFVTPD 1199
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|66359910|ref|XP_627133.1| (brahma like protein with a HSA domain, SNF2 like helicase and a bromo domain [Cryptosporidium parvum Iowa II] >gi|46228555|gb|EAK89425.1| brahma like protein with a HSA domain, SNF2 like helicase and a bromo domain [Cryptosporidium parvum Iowa II])

HSP 1 Score: 171.4 bits (433), Expect = 3.096e-45
Identity = 101/228 (44.30%), Postives = 135/228 (59.21%), Query Frame = 0 
Query:   11 LSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYLLPPSSAPRLTTS---------------------NLLNQLRKVLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGD 217
            +S+EE+ L++ +LH VLRPFLLRR K QV + +P K E +L CPLS  Q+ LY+ LE    +       L    + P L ++                     ++L +LR   G R LIFSQ T  L L+E F   R MP+ RLDG T ++ R E +  FN    + +  FL++T+AGG G+NLQ+ ADTVILFDSDWNPQ+D QA +R HRIGQ +EVL LR V+ D
Sbjct:  963 ISEEEQLLIVDRLHKVLRPFLLRREKIQVANEVPPKLEEILWCPLSGLQQYLYKELESNENSGPNVLMQLRKVCNHPFLFSTEIQYPSDESIVRVCGKFVMLDSILPKLRAA-GHRVLIFSQMTKLLTLLEVFLSLRNMPFLRLDGTTLSEDRQESLKLFN-AENSPYFVFLLSTKAGGFGINLQS-ADTVILFDSDWNPQNDEQAQSRAHRIGQKKEVLTLRFVTPD 1187
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|1129251649|gb|OLQ19296.1| (putative global transcription activator SNF2L2 [Cryptosporidium hominis])

HSP 1 Score: 171.4 bits (433), Expect = 3.312e-45
Identity = 101/228 (44.30%), Postives = 135/228 (59.21%), Query Frame = 0 
Query:   11 LSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYLLPPSSAPRLTTS---------------------NLLNQLRKVLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGD 217
            +S+EE+ L++ +LH VLRPFLLRR K QV + +P K E +L CPLS  Q+ LY+ LE    +       L    + P L ++                     ++L +LR   G R LIFSQ T  L L+E F   R MP+ RLDG T ++ R E +  FN    + +  FL++T+AGG G+NLQ+ ADTVILFDSDWNPQ+D QA +R HRIGQ +EVL LR V+ D
Sbjct:  964 ISEEEQLLIVDRLHKVLRPFLLRREKIQVANEVPPKLEEILWCPLSGLQQYLYKELESNENSGPNVLMQLRKVCNHPFLFSTEMQYPSDESIVRVCGKFVMLDSILPKLRAA-GHRVLIFSQMTKLLTLLEVFLSLRNMPFLRLDGTTLSEDRQESLKLFN-AENSPYFVFLLSTKAGGFGINLQS-ADTVILFDSDWNPQNDEQAQSRAHRIGQKKEVLTLRFVTPD 1188
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|923125442|ref|XP_013756189.1| (chromatin structure-remodeling complex subunit snf21 [Thecamonas trahens ATCC 50062] >gi|906558016|gb|KNC51259.1| chromatin structure-remodeling complex subunit snf21 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 171.4 bits (433), Expect = 3.506e-45
Identity = 99/227 (43.61%), Postives = 134/227 (59.03%), Query Frame = 0 
Query:   19 VLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYL---------------LPPSSAPRLTTSNLL----------NQLRK--VLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGDN 218
            ++ +LH VLRPFLLRR K +V   LP K E +L C +S+ Q+ LY+ L +    ++  P  L               L P + P++T  N++          N LRK  VLG R L+FSQ T  L ++EDF I RG  Y RLDG T    R E++ +FN      F+ FL++TRAGG+GLNLQ+ ADTVILFDSDWNP +D QA  R HRIGQ  +V + RL++ ++
Sbjct:  595 IINRLHKVLRPFLLRRLKKEVAKQLPDKVETVLKCDMSSVQKALYKRLSNREVVNAGGPKALNNVLMELRKVCNHPYLFPDADPKVTDLNIVRSCGKFALLDNLLRKLRVLGNRVLLFSQMTALLTVLEDFLIFRGYTYIRLDGSTRNVDRGELLRKFNAPDSPYFV-FLLSTRAGGLGLNLQS-ADTVILFDSDWNPHADLQAQDRAHRIGQKTQVRIFRLITQNS 819
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|961502374|emb|CUV07778.1| (unnamed protein product [Cryptosporidium hominis])

HSP 1 Score: 171.4 bits (433), Expect = 4.095e-45
Identity = 101/228 (44.30%), Postives = 135/228 (59.21%), Query Frame = 0 
Query:   11 LSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYLLPPSSAPRLTTS---------------------NLLNQLRKVLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGD 217
            +S+EE+ L++ +LH VLRPFLLRR K QV + +P K E +L CPLS  Q+ LY+ LE    +       L    + P L ++                     ++L +LR   G R LIFSQ T  L L+E F   R MP+ RLDG T ++ R E +  FN    + +  FL++T+AGG G+NLQ+ ADTVILFDSDWNPQ+D QA +R HRIGQ +EVL LR V+ D
Sbjct:  964 ISEEEQLLIVDRLHKVLRPFLLRREKIQVANEVPPKLEEILWCPLSGLQQYLYKELESNENSGPNVLMQLRKVCNHPFLFSTEMQYPSDESIVRVCGKFVMLDSILPKLRAA-GHRVLIFSQMTKLLTLLEVFLSLRNMPFLRLDGTTLSEDRQESLKLFN-AENSPYFVFLLSTKAGGFGINLQS-ADTVILFDSDWNPQNDEQAQSRAHRIGQKKEVLTLRFVTPD 1188
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|1098429060|gb|OII76962.1| (transcription regulatory protein SNF2 [Cryptosporidium andersoni])

HSP 1 Score: 168.703 bits (426), Expect = 2.801e-44
Identity = 101/230 (43.91%), Postives = 132/230 (57.39%), Query Frame = 0 
Query:   11 LSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYLLP-----------------PSSAPRLTTSNLLNQLRKVL------GRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGD 217
            +S+EE+ L++ +LH VLRPFLLRR K QV + +P K E +L CPLS  Q+ LY+ LE+     +  P  L+                  PS    +        L  +L      G R LIFSQ T  L L+E F   R M Y RLDG T ++ R   +  FN    + +  FL++T+AGG G+NLQ+ ADTVILFDSDWNPQ+D QA +R HRIGQT+EVL LR V+ D
Sbjct:  811 ISEEEQLLIIDRLHKVLRPFLLRREKIQVANEVPPKLEEILWCPLSGLQQYLYKELEN---NENSGPNVLMQLRKVCNHPFLFSTEMQLPSDESIIRVCGKFVMLDSILPKLRAAGHRVLIFSQMTRLLSLLEIFLSLRNMTYLRLDGTTLSEDRQNSLQLFN-ATNSPYFVFLLSTKAGGFGINLQS-ADTVILFDSDWNPQNDEQAQSRAHRIGQTKEVLTLRFVTPD 1035
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|209877056|ref|XP_002139970.1| (transcription regulatory protein SNF2 [Cryptosporidium muris RN66] >gi|209555576|gb|EEA05621.1| transcription regulatory protein SNF2, putative [Cryptosporidium muris RN66])

HSP 1 Score: 168.703 bits (426), Expect = 3.233e-44
Identity = 101/230 (43.91%), Postives = 132/230 (57.39%), Query Frame = 0 
Query:   11 LSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHSPAPTYLLP-----------------PSSAPRLTTSNLLNQLRKVL------GRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVSGD 217
            +S+EE+ L++ +LH VLRPFLLRR K QV + +P K E +L CPLS  Q+ LY+ LE+     +  P  L+                  PS    +        L  +L      G R LIFSQ T  L L+E F   R M Y RLDG T ++ R   +  FN    + +  FL++T+AGG G+NLQ+ ADTVILFDSDWNPQ+D QA +R HRIGQT+EVL LR V+ D
Sbjct:  810 ISEEEQLLIVDRLHKVLRPFLLRREKIQVANEVPPKLEEILWCPLSGLQQYLYKELEN---NENSGPNVLMQLRKVCNHPFLFSTEMQLPSDESIIRVCGKFVMLDSILPKLRAAGHRVLIFSQMTRLLSLLEIFLSLRNMTYLRLDGTTLSEDRQNSLQLFN-ATNSPYFVFLLSTKAGGFGINLQS-ADTVILFDSDWNPQNDEQAQSRAHRIGQTKEVLTLRFVTPD 1034
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|921124956|ref|XP_013437088.1| (transcription regulatory protein SNF2, putative [Eimeria necatrix] >gi|557230992|emb|CDJ68621.1| transcription regulatory protein SNF2, putative [Eimeria necatrix])

HSP 1 Score: 167.162 bits (422), Expect = 1.214e-43
Identity = 95/225 (42.22%), Postives = 135/225 (60.00%), Query Frame = 0 
Query:    9 VVLSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHS---------PAPTYLLPPSSAP---------RLTTSNLLNQLRKVLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVS 215
            + +++EE+ L++ +LH VLRPFLLRR K++V + LP KQE ++ CPLS  QR LYR++E+    H+           P      S  P         +    ++L    K    R L+FSQ T  LDL+E +   RG  Y RLDG T ++ R   +A +N      F+ F+++T+AGG+G+NLQ+ ADTVI+FDSDWNPQ+D QA +R HRIGQ  EVL +R V+
Sbjct:  960 ITVTEEEKLLIIDRLHKVLRPFLLRREKAEVANELPSKQEEIVWCPLSGIQRILYRIIEESPMGHNRMVQLRKVCNHPFLFCFSSFTPDESLVRCCGKFAMLDVLLPALKAAQHRVLVFSQMTKLLDLLEAYLSLRGYRYLRLDGGTSSEERQTRLALYNQENSPYFL-FILSTKAGGLGVNLQS-ADTVIIFDSDWNPQNDEQAQSRAHRIGQKREVLTIRFVT 1182
[Close]
BLAST of EWM25311.1 vs. NCBI_GenBank
Match: gi|916413282|ref|XP_013227872.1| (transcription regulatory protein SNF2, putative [Eimeria tenella] >gi|557137226|emb|CDJ37034.1| transcription regulatory protein SNF2, putative [Eimeria tenella])

HSP 1 Score: 166.777 bits (421), Expect = 1.286e-43
Identity = 95/225 (42.22%), Postives = 135/225 (60.00%), Query Frame = 0 
Query:    9 VVLSKEEESLVLCQLHSVLRPFLLRRTKSQVLSHLPRKQERLLACPLSAWQRRLYRLLEDLSRAHS---------PAPTYLLPPSSAP---------RLTTSNLLNQLRKVLGRRPLIFSQFTTSLDLIEDFFIHRGMPYCRLDGRTPADARAEIIAEFNCGRRASFMAFLITTRAGGVGLNLQAGADTVILFDSDWNPQSDAQAMARCHRIGQTEEVLVLRLVS 215
            + +++EE+ L++ +LH VLRPFLLRR K++V + LP KQE ++ CPLS  QR LYR++E+    H+           P      S  P         +    ++L    K    R L+FSQ T  LDL+E +   RG  Y RLDG T ++ R   +A +N      F+ F+++T+AGG+G+NLQ+ ADTVI+FDSDWNPQ+D QA +R HRIGQ  EVL +R V+
Sbjct:  957 ITVTEEEKLLIIDRLHKVLRPFLLRREKAEVANELPSKQEEIVWCPLSGIQRILYRIIEESPMGHNRMVQLRKVCNHPFLFCFSSFTPDESLVRCCGKFAMLDVLLPALKAAQHRVLVFSQMTKLLDLLEAYLSLRGYRYLRLDGGTSSEERQTRLALYNQENSPYFL-FILSTKAGGLGVNLQS-ADTVIIFDSDWNPQNDEQAQSRAHRIGQKREVLTIRFVT 1179
The following BLAST results are available for this feature:
BLAST of EWM25311.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107066|gb|EWM25311.1|1.485e-171100.00transcription regulatory protein [Nannochloropsis ... [more]
gi|1098425533|gb|OII73658.1|2.481e-4544.30hypothetical protein cubi_03456 [Cryptosporidium u... [more]
gi|66359910|ref|XP_627133.1|3.096e-4544.30brahma like protein with a HSA domain, SNF2 like h... [more]
gi|1129251649|gb|OLQ19296.1|3.312e-4544.30putative global transcription activator SNF2L2 [Cr... [more]
gi|923125442|ref|XP_013756189.1|3.506e-4543.61chromatin structure-remodeling complex subunit snf... [more]
gi|961502374|emb|CUV07778.1|4.095e-4544.30unnamed protein product [Cryptosporidium hominis][more]
gi|1098429060|gb|OII76962.1|2.801e-4443.91transcription regulatory protein SNF2 [Cryptospori... [more]
gi|209877056|ref|XP_002139970.1|3.233e-4443.91transcription regulatory protein SNF2 [Cryptospori... [more]
gi|921124956|ref|XP_013437088.1|1.214e-4342.22transcription regulatory protein SNF2, putative [E... [more]
gi|916413282|ref|XP_013227872.1|1.286e-4342.22transcription regulatory protein SNF2, putative [E... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):
Feature NameUnique NameSpeciesType
rna5370rna5370Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications