EWM27456.1, cds3225 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|585109711|gb|EWM27456.1| (e3 ubiquitin-protein ligase rnf14 [Nannochloropsis gaditana]) HSP 1 Score: 1405.58 bits (3637), Expect = 0.000e+0 Identity = 683/683 (100.00%), Postives = 683/683 (100.00%), Query Frame = 0
Query: 1 MSEEEECQEQQVLEVEALQAILGAGQAGVELDEVSFDVRGDGSTGSPFRLRCEVDIELPAQEAIDIIVTGGTRTSESYREHDDSSENDGEVNAEVACSKNTSAIDPSPQLELRGIKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRCQCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
MSEEEECQEQQVLEVEALQAILGAGQAGVELDEVSFDVRGDGSTGSPFRLRCEVDIELPAQEAIDIIVTGGTRTSESYREHDDSSENDGEVNAEVACSKNTSAIDPSPQLELRGIKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRCQCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS
Sbjct: 1 MSEEEECQEQQVLEVEALQAILGAGQAGVELDEVSFDVRGDGSTGSPFRLRCEVDIELPAQEAIDIIVTGGTRTSESYREHDDSSENDGEVNAEVACSKNTSAIDPSPQLELRGIKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRCQCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|552816259|ref|XP_005844643.1| (hypothetical protein CHLNCDRAFT_138969 [Chlorella variabilis] >gi|307104286|gb|EFN52541.1| hypothetical protein CHLNCDRAFT_138969 [Chlorella variabilis]) HSP 1 Score: 237.269 bits (604), Expect = 2.341e-65 Identity = 179/582 (30.76%), Postives = 250/582 (42.96%), Query Frame = 0
Query: 115 IKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEP--ILGREVKEKDANDTGTG-ASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQ-CGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVE-------KDAKSCPACGMSVQKTEGCNKMRC-QCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVC-GCHTFRKASDHFGGSKPCRQHS 683
++YL P+ + L L YP PP +++ LW+ R++ +L R+W E GGPV Y+W +WL+ ++ L E +L + D + G G A+ PR G G P G + E EVA + R L+ + + A F + HTC +C +E PG +FV L+ C H WC CL A +V EGG L+ L CP P C + P VLR +L+ ++F RWE+L+LQ+ LD M D A CPRC + L + +CPTC FVFC C + +H GT C S+E +L V ++A GGRA ++ LRR +E LS +E K +K CP CGM+ QK EGCNKM C CG WCW+C K+I +GY HF +G C L++ +L W+ Q M+ R L EM C +N K +NNH C +C +C C R A G + C+QHS
Sbjct: 176 VQYLPPICMQLRLGGGYPGQEPPGVSLSALWLGAAQVARLQRQLLRLWHEQGPGGPVCYTWADWLQSSALQHLGGEQALLLADDAPSSDGSTNGGGVAAGEPRAGS--------------SGRPDSPGAEGGDEVEQ----------EVA---EERLVKLLRYDAVQEHAAFQRARHTCGVCLEEAPGTAFVRLEGCRHAWCALCLAEQARIHVAEGG--LEKLRCPDPGCGAALAPGVLRR-VLSPDDFGRWEQLTLQRTLDTMPDAAYCPRCSSLALEDAD-----------------------SCAQCPTCLFVFCSLCNEGWHPGTTCVSAETKLAMVRRKLA------GGGRA-------AVDDLRRQEQELLSLAQIEAGWAALCKMSKRCPQCGMATQKAEGCNKMACGGCGAYWCWRCGKEI--DGYRHFR---SGQCILFDEAEILRWEAQWEEMQAAA----------RVMAAGLRNEM-------------------------------------------CGQVNHKIGNNNHLACWSCTSHFCYCCRAVLRGRGAGGSHFGPRGCKQHS 633
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|902225615|gb|KNA20123.1| (hypothetical protein SOVF_055230 [Spinacia oleracea]) HSP 1 Score: 232.646 bits (592), Expect = 2.006e-63 Identity = 168/586 (28.67%), Postives = 242/586 (41.30%), Query Frame = 0
Query: 100 NTSAIDPSPQLELRGIKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVES-EIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRC-QCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
N+ D L ++YL P+ L LP +YP CPP TI W+ E ++ + L +W E G ++Y W+EWL + L G+ E G + RR SP D +P + ++ + FL G H C ICF E G F+ L C H++C C+ + A +V EG + L CP C I P +L+ LL EEF RWE L LQ++LD M DVA CPRC+TPCL + + +C C F FC C++ H G C + E +LK +E + + L+ Q + L +R S K + +DAK CP C +++ +TEGCNKM C QCG +C++C K IS GY HF E GGC L+ +EA++ W+ Q+ + R+ G + +M C C +N K +NNH C AC+ YC +C R++S+H+ G K C+QHS
Sbjct: 222 NSKVCDSDDFLYTFKVQYLPPIILTCLLPKSYPSHCPPSFTISVQWLHESRISKLCSMLDLLWNE-QAGQEILYQWVEWLHSSSLSYL--------------------GSDEELLLGPYNVKSVPDRRAFSGSLSP-------------DIDIPS----------------MRSYNEERVHENFLSGCHECCICFSEYAGTEFLRLPCHHFFCVKCMTTYADVHVKEGT--VNKLQCPSTKCGGMIPPGLLKR-LLGDEEFQRWESLVLQKSLDAMPDVAYCPRCETPCLEDDDQH-----------------------AQCSKCFFSFCSLCREKRHVGIACMTPEMKLKFLEERQNSSLIKDEQRRKELDMINELR------------SVKEILRDAKQCPNCKIAISRTEGCNKMVCTQCGKYFCYRCSKAIS--GYEHFREE--GGCQLFPQEAIVQWEEQV---------------NARQVLGQIQAQMF---------------------------------AANARPCPGCKQLNAKMGNNNHIFCWACQNHYCYLCR-KMVRRSSEHY-GPKGCKQHS 665
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|971520247|dbj|GAQ78006.1| (hypothetical protein KFL_000060730 [Klebsormidium nitens]) HSP 1 Score: 233.032 bits (593), Expect = 3.313e-63 Identity = 176/572 (30.77%), Postives = 237/572 (41.43%), Query Frame = 0
Query: 115 IKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTL--QCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRC-QCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
+++L PL L LP+ YP PP + +W+ P R+ L +W+E G V+YSW +WL + E L + GE L TL +G ++ W + Q L+ + KT F +G H C +CF EQPG FV L C H +CR C+ S+ +V EG L L CP DC + P++++ +LL E+F RWE L LQ+ D M DV CPRC+T + E +C C F FC C DA H G+ C +EA+L A L T+G R A Q + L E L+ K VE++AK CP CGM++QK EGCNKM C C +C+KC K IS GY HF+ +G C L+E + AW R M G DR A ++ VR C AC N+K NNH RC +C+ +C CG K S HF G K C+QH+
Sbjct: 262 LEHLPPLRLTCTLPAAYPSHSPPRFALSSVWLTRPQLGRLCRGLDEVWQE-NQGQVVVYSWADWLTRETFETLDL--------------------------GESFELGG----TLNAEGKGKESAEHDERAQAEGWGV------------QDVLSRLLRYNEEKTMEEFRKGVHECQVCFAEQPGTEFVHLWPGCRHNFCRGCMTSLVDIHVKEGS--LARLTCPDTDCKEPLPPNIIK-DLLAPEQFQRWETLMLQKTFDSMSDVVYCPRCETATIEEPDH-----------------------TAQCQKCFFAFCSLCDDATHFGSQCMDAEAQL-------AVLRERTRG-RLPAEEQKRKEAAL---LNEILNMKYVEREAKKCPKCGMAIQKDEGCNKMTCWNCSSYFCYKCGKAIS--GYDHFN---SGACVLFEAAEIDAWNRMM----AGVNAPRNEARDRIDAQIQMYPNRVRA-------------------------------------CPACRQPNVKEAGNNHLRCWSCQNHFCGACG-KAVLKGSHHF-GPKGCKQHT 705
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|1021515369|ref|XP_016201136.1| (E3 ubiquitin-protein ligase RNF14 [Arachis ipaensis]) HSP 1 Score: 221.476 bits (563), Expect = 2.788e-59 Identity = 162/573 (28.27%), Postives = 239/573 (41.71%), Query Frame = 0
Query: 115 IKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLV--EPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRC-QCGVLWCWKCRKDIS-TEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
++YL P+ L LP +YP PP T+ W++ + ++L +W E G VIY W++WL+ + L E ILGR G R G ++ L + P G+N K H E FL+ H C ICF E PG FV L C H++C CL++ +V EG + L CP C + I P +L+H LL EE+ RWE + L++ L M DV CPRC+TPC+ + + +C C F FC C++ H G C + + +L+ ++ Q L Q +R R E LS K + +D+K CP+C M++ +TEGCNKM+C CG +C++C K I ++ Y HF + G C L+ +E + WQ ++ + R+ G L E+ R RG + C C N K +NNH C AC+ YC +C R+ S H+ G K C+QH+
Sbjct: 243 VQYLPPIVLTCLLPKSYPSHQPPLFTVSVQWLESLDILSLCSQLDSIWAE-QQGQEVIYQWVDWLQSSSLSHLGFDKEIILGR---------NGVNCVGDERVVSG---------SISLDAAIP--FLRGYN---------KERHNEN----------------------FLKELHECSICFSEYPGTEFVRLPCQHFFCLKCLQTFTQMHVKEGT--ISNLQCPDSKCKVMIPPGLLKH-LLGDEEYERWESMMLERTLASMSDVVYCPRCETPCIEDEDQH-----------------------AQCSKCFFSFCTLCRERRHVGIACMTLDMKLQ--------ILQDRQNSSQLKEDQKLR---EREKINEMLSMKEIHRDSKLCPSCSMAINRTEGCNKMKCSNCGAYFCYRCNKLIDPSDPYGHFRD---GSCELFPQEMIENWQERI---------------NHRQVVGQLQAELF-------------------RERG--------------LPCPNCRQFNAKVGNNNHMFCWACQSHYCYLCN-EIVRRGSKHY-GPKGCKQHT 673
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|873241170|emb|CEL92756.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 218.394 bits (555), Expect = 2.841e-58 Identity = 163/563 (28.95%), Postives = 248/563 (44.05%), Query Frame = 0
Query: 3 EEEECQEQQVLEVEALQAILGAGQAGVELDEVSFDVRGDGSTGSPFRLRCEVDIELPAQEAIDIIVTGGTRTSESYREHDDSSENDGEVNAEVACSKNTSAIDPSPQLELRGIKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQ-CGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRC-QCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQM 563
E E + Q E+ AL++I + D+ + D P + P+ EAID+I R E +H + D + + + I +++L PL+L++ +P YP P T+ +W+D+ + R+ L ++WEE G P++++W +L D M L +GR + + G G+G D P+A+ +V L+ + ++ + HTC ICFD G L C H +C CL + T+V +G +L L CP P C I P+VL H LL +E+ RW+RLSLQ+ALD M D+ CPRC+ R E + D L CP C+F FC C+ +H GT C E L+ +E A ++G +A R + L++ AE S K ++++A+ CP CGM++ KTEGCNKM+C QC +CWKC + IS GY HF+ N CNL++ E + W R M
Sbjct: 56 EREANERAQEDEIMALESIYMEAFKAISTDKSPRVFQLDVEVTFP---DAPSSADAPSDEAIDVI----ARFEEPSAQHHPNYAGDEDHPDRLRIEQQDVPIG--------RVRFLPPLSLHIVMPPAYPSRRSPFFTLSAMWIDKGAVGRLCRRLDQLWEEEGPGSPIVFTWANFLSTDSMGYL----SMGRLIVIAPLREEG---------GDGHTTGD------------PRAMQECADVGVC-------------------VEELLRYDASREDVEYRSTKHTCMICFDVMLGERMDRLPGCRHAYCTQCLAGLVKTHVKDGAINL--LRCPEPSCGRSIDPEVL-HRLLDEDEYERWQRLSLQKALDGMGDLVYCPRCE-------AHRNENTAVLEDAD----------HLARCPKCHFAFCGICRAEWHPGTACLDPEQLLEVLE-------ARSKGDKAYGEEVLRREQNLKQEAE---SLKTIKREARQCPTCGMAIYKTEGCNKMKCEQCYTNFCWKCLQPIS--GYEHFANNPN--CNLFDMEEIERWNRMM 525
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|508777891|gb|EOY25147.1| (NDR1/HIN1-like 8, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 215.698 bits (548), Expect = 3.918e-57 Identity = 154/570 (27.02%), Postives = 240/570 (42.11%), Query Frame = 0
Query: 115 IKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRCQ-CGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
++YL P+ L LP +YP PP TI W+ + ++L +W+E G VIY W +WL++ + L G + G N+ RR + SP + D ++ + E+ FL+ H C ICF E G+ F+ L C H++C C+++ + ++TEG + L+CP C + P +L+ LL E + RWE L LQ+ L+ M DV CPRC+TPC+ + + +C C F FC C++ H G C + E +L R++ Q L +Q K R E LS K + +DAK CP+C M++ KTEGCNKM C+ CG +C++C I+ GY HF + G C L+ +E + W+ ++ + R+ G +H ++ RG+ C C +N K +NNH C AC+ YC +C + R++S H+ G K C+QH+
Sbjct: 249 VQYLPPIVLTCLLPRSYPSHLPPYFTISVQWLHSARISDLCSQLDLIWKE-QEGQEVIYRWADWLQNFSLSYL--------------------GCDKEIMLGPYGIENNGERRAVSGSVSP-----------DVDVPFIRSYNDEIC------------------HENFLESLHECSICFSEYAGIDFIRLPCQHFFCCKCIKTYSDMHITEGT--VNKLLCPEAKCGGTVPPGLLK-RLLGDEGYERWESLMLQKTLESMSDVVYCPRCETPCIEDEDQH-----------------------AQCSKCFFSFCTLCRERRHVGIECMTPELKL--------RILQERQNSSQLNQAQK---HKEREMINEILSMKEIMRDAKQCPSCKMAISKTEGCNKMVCENCGQYFCYRCNSAIN--GYDHFRD---GACELFPQEMIREWEERL---------------NARQVLGQVHAQLF-------------------AERGQ--------------PCPNCRQLNAKVGNNNHIFCWACQMHYCYLCK-NIVRRSSQHY-GPKGCKQHT 676
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|297851676|ref|XP_002893719.1| (E3 ubiquitin-protein ligase RNF14 [Arabidopsis lyrata subsp. lyrata] >gi|297339561|gb|EFH69978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 214.157 bits (544), Expect = 1.413e-56 Identity = 174/616 (28.25%), Postives = 253/616 (41.07%), Query Frame = 0
Query: 78 YREHDDSSENDGEVNAEVACSKNTSA-----IDPSPQLE--LRGIK--YLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRC-QCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
+ H D VN E N SA D S + E L K +L P+ L LP+ YP PP I W++ + + L +W E G V+Y W +WL++ + L + KE G S R G SR SP D +P ++ ++ K FLQ H C ICF E G+ FV L C H++C C+++ +V+EG + L+CP C + P +L+ LL E + RWE L LQ+ L+ M DVA CPRC+TPC+ DE + L C C F FC C++ H G C S E RL+ ++ QG L Q K + E +S KV+ K AK CP+C +++ +T GCNKM C CG +C++C K I+ GY HF E G C+L+ +EA+ W +M + R+ G + ++ G+ P G+ C C N K +NNH C AC+ +C +C +K++ H+ G K C+QH+
Sbjct: 201 FDRHKDMRYFQVHVNVEATSEYNISAKLKLQADSSKESEDFLYSFKAQHLPPIVLTCLLPNAYPSHLPPYFLISVQWMNPDKISSLCSMLDSIWME-QPGQEVLYLWTDWLQNSSISHLGFD-------KEIFLGPYGVTCSRDKRAVSG------SR-------SP-------------DSDIP----------------YIRSYDDEKRHESFLQSLHECCICFTESAGIDFVKLPCQHFFCLKCMKTYTDIHVSEGT--VNKLMCPDSKCGEIVPPGILK-RLLGEEAYERWETLMLQKTLESMTDVAYCPRCETPCI----------EDEEQ-------------LALCFKCYFSFCTLCKEKRHVGVACMSPELRLQ--------ILQERQGSSRLGEEQR---RKEKEMINEIMSVKVIMKSAKQCPSCKIAISRTGGCNKMVCNNCGQYFCYRCNKAIT--GYEHFRE---GTCDLFPQEAIQEWNERM---------------NERQVIGQIQAQLF-------AQHGQFPQRGQ--------------------LCPNCRQFNAKAGNNNHLFCWACQAHFCYLCK-KVVKKSAQHY-GPKGCKQHT 680
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|242074180|ref|XP_002447026.1| (E3 ubiquitin-protein ligase RNF14 [Sorghum bicolor] >gi|241938209|gb|EES11354.1| hypothetical protein SORBI_3006G199200 [Sorghum bicolor]) HSP 1 Score: 211.846 bits (538), Expect = 4.673e-56 Identity = 190/676 (28.11%), Postives = 278/676 (41.12%), Query Frame = 0
Query: 9 EQQVLEVEALQAILGAGQAGVELDEVSFDVRGDGSTGSPFRLRCEVDIELPAQEAIDIIVTGGTRTSESYREHDDSSENDGEVNAEVACSKNTSAIDPSPQLELRGIKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEPILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRC-QCGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
++Q E+ AL+AI G A V LD G + V IE+P ++ID+ T +Y DG +N C + + R +++L P+ L LP++YP PP TI W+D+ + L +WEE G V Y W++WL+ + L + G + + D G + P +PP D +P+ L+ + K FL H C ICF E PG+ F+ L C H++C C+++ V EG ++ L+CP C + P+VL+ LL +E+ RWE L LQ+ LD M+DV CPRCQT CL + G C +C F FC C++ H G C S E RL +E S NV+ +++ + EE S K + KD+K CP C M++ KTEGCNKM C CG +C++C + I+ GY HF G C L+ +E L W+ QM RR+ H EM G +G+ C C + K +NNH C AC++ +CA+C T +K + H+ G K C+QHS
Sbjct: 144 QRQEDEICALEAIFG--DAVVILDR----------KGGQRSFQVLVHIEIP--DSIDV------STKLNY--------GDGTLNYGATCDDDDDLF-----YKFR-VEHLPPILLTCLLPTSYPSHRPPFFTISTYWLDKRMISLLCRMLDMLWEE-QQGMEVAYQWVQWLQSSSLSHLGFDN--GVILSKSDVTCDADGEDKRACP----------------DNAPP------------DVIIPR----------------LMRYNDNKHHEAFLHAIHDCMICFSECPGVDFIKLPCHHFFCWKCMQTYCKMNVKEG--NVVKLLCPDTKCEGAVPPNVLK-RLLEEDEYERWEGLLLQRTLDAMKDVVYCPRCQTACLEDVGNE-----------------------AVCSSCLFSFCTLCRNRRHVGEQCMSPEERLMILEKR--------------QESGNVQGDQM-KILEELRSLKEIMKDSKQCPKCRMAISKTEGCNKMHCGNCGEYFCYQCNRAIT--GYEHFR----GSCVLFPQEELDRWELQM------------NQRVRRQVVAHAHAEM-------HGRDGQAHP------------------------CPTCRQPSPKIGNNNHLFCWACQKHFCALCH-KTVQKPAQHY-GPKGCKQHS 646
BLAST of EWM27456.1 vs. NCBI_GenBank
Match: gi|695026879|ref|XP_009400756.1| (PREDICTED: E3 ubiquitin-protein ligase RNF14 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 209.149 bits (531), Expect = 2.507e-55 Identity = 196/691 (28.36%), Postives = 284/691 (41.10%), Query Frame = 0
Query: 3 EEEECQEQQVL--------EVEALQAILGAGQAGVELDEVSFDVRGDGSTGSPFRLRCEVDIELPAQEAIDIIVTGGTRTSESYREHDDSSENDGEVNAEVACSKNTSAIDPSPQLELRGIKYLSPLTLYLALPSTYPVTCPPELTIEGLWVDEPSSRRIKAELTRMWEEIYHGGPVIYSWMEWLRHDLMEILLVEP-ILGREVKEKDANDTGTGASEAPRPGEGEALNDLSRRTLILQGSPPQALFTGHNVDEADWSLPKTTHAEVAPTWQSRFRHLVAHAYAKTSAVFLQGTHTCFICFDEQPGLSFVTLQCGHWWCRSCLRSMASTYVTEGGHHLQWLVCPRPDCALEITPDVLRHELLTSEEFARWERLSLQQALDRMEDVAPCPRCQTPCLTEGGRRREGGSDEGKVDGKGRSKTGGADLGECPTCNFVFCPQCQDAYHAGTPCYSSEARLKQVESEIARLMASTQGGRALAPSQNVRLEKLRRAAEESLSRKVVEKDAKSCPACGMSVQKTEGCNKMRCQ-CGVLWCWKCRKDISTEGYAHFSENATGGCNLWEREALLAWQRQMLMMEGGGMGNGGGGGDRRRAGGDLHGEMVRMLQWGRGWEGEGPGEGRRRRRGRWRGEDANEDGVKLVRCGACHAMNLKTDSNNHRRCGACRRSYCAVCGCHTFRKASDHFGGSKPCRQHS 683
EE E E+Q+ EV AL+AI G + +SFD + +G F++R E D LP D I S + + S +G T + D L ++YL PL L LP +YP PP TI W++ + +L +W E G + Y W++WL++ + L + ++ +D D R G A D ++I N D+ K FL H C ICF E G SF+ L C H++C CL + ++ +V EG + L+CP C + P +L+ LL SE + RWE L LQ+ LD M DVA CPRC+T CL + +C C F FC C++ H G C + E +L+ ++ + Q L+ +Q L R E LS K +DAK CP+C M++ +TEGCNKM CQ CG +C++C K I +GY HF E GC L+ RE + W+ QM + R+ G + E+ P G C C +N K +NNH C AC++ YCA+C T RK+S+HFG ++ C+QH+
Sbjct: 85 EEPELSEEQIRVNDQMQEDEVLALEAIYGD-------NVLSFD-KKEGLRF--FQVRMEYD--LP-----DCINVSAMLQSSTTKVKSGSRSLNGR----------TKSDDSHEFLYTFNVQYLPPLLLTCLLPKSYPSHRPPYFTITVDWLNSEKISSLCHKLDAIWME-QPGQEITYQWVDWLQNYSLSYLGFDSGVMLDRYDMQDVKDI--------RADFGNARPDFIISSMI-------------NYDQE-----------------------------KCHQSFLNNLHQCIICFTEYAGTSFIKLPCQHFFCWKCLETYSNMHVMEGT--VTKLLCPTDRCGGFVPPGLLK-RLLGSEAYKRWESLVLQKTLDSMTDVAYCPRCETACLEDEEHH-----------------------AQCSKCFFSFCSLCRERRHVGVECMTLEVKLQ--------ILQARQNSSNLSRNQ---LHMEREMINEILSVKEALRDAKQCPSCKMAISRTEGCNKMVCQNCGQYFCYRCNKAI--DGYDHFRE----GCELFPREEIERWEIQM---------------NPRQVVGQIRAELY-------------PNVGH--------------------PCPTCRQVNPKVGNNNHIFCWACQKHYCAMCR-KTVRKSSEHFGPNR-CKQHT 604 The following BLAST results are available for this feature:
BLAST of EWM27456.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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