NO09G02100.1, NO09G02100.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G02100.1
Unique NameNO09G02100.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1380
Alignment locationchr9:645469..646848 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:645469..646848 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO09G02100.1 vs.
Match: EWM27535.1 (histidinol-phosphate aminotransferase [Nannochloropsis gaditana])

HSP 1 Score: 746.9 bits (1927), Expect = 3.800e-212
Identity = 369/460 (80.22%), Postives = 408/460 (88.70%), Query Frame = 0 
Query:    1 MITLTESELALLAGVSGLAVYAAKQTPKCPFHRLVFAVSNVAVLGGGLYILWRSWSEAPPRFVRFL-TAAKKSKQQPRGCVKGEEAKERDQDPRVAAVLGLVRQNILELEPYRCARDDYSEGILLDANENSFGSALPPAERTQQLERYPDPYQQELKEKIGAYRGVRPEQIFVGVGSDEAIDLIMRIFCEPGKDRILVTPPTYGMYKVSAKTNDVGIVAVPLTPDFSVRVSEILQAVASTPRIKVIFLCSPGNPTAKLVPLEVVEQVLKGVEGCMVVVDEAYVDFADANAVSACRLVDRYPNCLVLQTLSKAFGLAGIRCGMAIGHPAVIQVLNNVKAPYNVSKLTSSMAHKAFESGNLAVLKQNVKDILKEKERVVEALGGLSVVKKIHPSDTNFILFEVPQAKDIYQDMAEGGVVARFRGHELHCKDCIRLTIGQPHENDSFLELFKKTTEKYLGKYT 460
            MI +TE EL LLAG  GLA+YA KQ PKCPFHR++FA SN+ +LGGG+Y+LWRSWS++PP F   L T  KKS+++ RG  K      + QD RVAAVL LVR NI ELEPYRCARDDYSEGILLDANENSFGSALPP +R  +LERYPDPYQQ LKEKI  +R VRPEQIFVGVGSDEAIDLIMR+FCEPG+D+ILVTPPTYGMYKVSAKTNDVGIVAVPLTP+F+VRV E+LQAVA +PR+KVIFLCSPGNPTAKLVPLEVVEQVL+G  GCMVVVDEAYVDFA+ANAVSAC+LV++YPNCLVLQTLSKAFGLAGIRCGMAIGHPAVIQVLNNVKAPYNVS+LTS MAHK F + NLAVL+QNV DILKEK RVVEAL GL  VKKIHPSDTNFILFEVP+A++IY+DMAE GVVARFRGHELHCKDCIRLTIGQ HEND+FL+LFKKTTEKYLGKYT
Sbjct:   80 MIVITEKELTLLAGAGGLALYAGKQGPKCPFHRMLFAASNLVLLGGGVYVLWRSWSQSPPAFWCSLQTVRKKSRERLRGGKKARGEDAKHQDARVAAVLDLVRPNIWELEPYRCARDDYSEGILLDANENSFGSALPPEDRVLELERYPDPYQQPLKEKIAVFRNVRPEQIFVGVGSDEAIDLIMRVFCEPGRDQILVTPPTYGMYKVSAKTNDVGIVAVPLTPEFAVRVPEVLQAVAVSPRVKVIFLCSPGNPTAKLVPLEVVEQVLQGASGCMVVVDEAYVDFANANAVSACQLVEKYPNCLVLQTLSKAFGLAGIRCGMAIGHPAVIQVLNNVKAPYNVSQLTSHMAHKVFTAENLAVLQQNVSDILKEKTRVVEALQGLPAVKKIHPSDTNFILFEVPRAQEIYRDMAEAGVVARFRGHELHCKDCIRLTIGQAHENDTFLDLFKKTTEKYLGKYT 539
The following BLAST results are available for this feature:
BLAST of NO09G02100.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27535.13.800e-21280.22histidinol-phosphate aminotransferase [Nannochloro... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02100NO09G02100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G02100.1NO09G02100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G02100.1.cds1NO09G02100.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G02100.1 ID=NO09G02100.1|Name=NO09G02100.1|organism=Nannochloropsis oceanica|type=mRNA|length=1380bp
ATGATTACCTTGACAGAGAGCGAGCTGGCCTTGCTGGCGGGGGTGAGCGG
CTTGGCAGTGTACGCGGCGAAGCAAACGCCCAAGTGCCCCTTCCACCGCC
TCGTCTTTGCCGTTTCCAACGTGGCTGTGCTTGGGGGAGGGCTCTACATC
TTGTGGCGCTCCTGGTCCGAGGCCCCACCGCGGTTTGTGCGCTTCTTGAC
AGCAGCGAAGAAGAGCAAGCAACAACCACGCGGCTGTGTGAAGGGAGAAG
AAGCGAAGGAGCGAGACCAAGACCCGCGCGTGGCTGCCGTACTGGGTTTA
GTGCGACAGAACATTTTGGAGCTCGAGCCTTATCGATGTGCGCGGGACGA
TTACAGCGAGGGCATCCTGCTGGACGCGAACGAGAATTCGTTCGGCTCGG
CATTGCCTCCGGCAGAGCGAACACAGCAGCTGGAACGGTATCCGGACCCA
TACCAACAGGAGTTGAAGGAGAAGATTGGCGCCTACCGTGGCGTGCGGCC
GGAGCAGATTTTCGTGGGAGTAGGGAGCGACGAAGCAATCGATTTGATAA
TGCGGATTTTTTGCGAGCCCGGGAAGGACCGGATTCTGGTGACGCCTCCG
ACGTATGGCATGTATAAGGTGTCGGCCAAGACGAATGATGTGGGGATTGT
GGCTGTGCCTCTGACGCCTGACTTCTCGGTGCGAGTGTCAGAAATTCTGC
AGGCTGTTGCTTCTACTCCACGAATCAAGGTCATTTTCTTGTGTTCTCCT
GGGAACCCGACCGCGAAGCTCGTACCATTGGAGGTGGTAGAACAGGTTTT
GAAAGGCGTGGAGGGATGTATGGTAGTGGTGGATGAGGCGTATGTGGACT
TCGCGGATGCCAATGCCGTGAGTGCTTGTCGGTTGGTTGATCGATACCCA
AATTGCCTTGTGCTCCAGACGCTGTCTAAGGCGTTTGGTCTAGCAGGGAT
TAGGTGTGGGATGGCCATCGGCCATCCGGCCGTGATTCAGGTGTTGAACA
ACGTGAAGGCTCCGTATAATGTGAGTAAGTTGACGAGCAGCATGGCGCAT
AAGGCGTTTGAGAGTGGAAATTTGGCGGTGTTAAAGCAGAATGTCAAGGA
CATCCTGAAAGAGAAGGAACGGGTGGTGGAGGCTTTGGGGGGGCTGTCAG
TCGTGAAAAAAATTCACCCGTCGGATACGAATTTCATCCTGTTTGAGGTG
CCCCAGGCGAAAGATATTTACCAGGACATGGCGGAGGGCGGGGTGGTGGC
GCGGTTTCGCGGGCATGAGTTGCATTGCAAGGATTGTATTCGGTTGACCA
TTGGCCAGCCCCATGAGAACGATTCGTTTCTAGAGTTGTTCAAAAAGACT
ACGGAGAAGTATTTGGGGAAGTACACGTAG
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protein sequence of NO09G02100.1

>NO09G02100.1-protein ID=NO09G02100.1-protein|Name=NO09G02100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=460bp
MITLTESELALLAGVSGLAVYAAKQTPKCPFHRLVFAVSNVAVLGGGLYI
LWRSWSEAPPRFVRFLTAAKKSKQQPRGCVKGEEAKERDQDPRVAAVLGL
VRQNILELEPYRCARDDYSEGILLDANENSFGSALPPAERTQQLERYPDP
YQQELKEKIGAYRGVRPEQIFVGVGSDEAIDLIMRIFCEPGKDRILVTPP
TYGMYKVSAKTNDVGIVAVPLTPDFSVRVSEILQAVASTPRIKVIFLCSP
GNPTAKLVPLEVVEQVLKGVEGCMVVVDEAYVDFADANAVSACRLVDRYP
NCLVLQTLSKAFGLAGIRCGMAIGHPAVIQVLNNVKAPYNVSKLTSSMAH
KAFESGNLAVLKQNVKDILKEKERVVEALGGLSVVKKIHPSDTNFILFEV
PQAKDIYQDMAEGGVVARFRGHELHCKDCIRLTIGQPHENDSFLELFKKT
TEKYLGKYT*
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mRNA from alignment at chr9:645469..646848+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G02100.1 ID=NO09G02100.1|Name=NO09G02100.1|organism=Nannochloropsis oceanica|type=mRNA|length=1380bp|location=Sequence derived from alignment at chr9:645469..646848+ (Nannochloropsis oceanica)
ATGATTACCTTGACAGAGAGCGAGCTGGCCTTGCTGGCGGGGGTGAGCGG
CTTGGCAGTGTACGCGGCGAAGCAAACGCCCAAGTGCCCCTTCCACCGCC
TCGTCTTTGCCGTTTCCAACGTGGCTGTGCTTGGGGGAGGGCTCTACATC
TTGTGGCGCTCCTGGTCCGAGGCCCCACCGCGGTTTGTGCGCTTCTTGAC
AGCAGCGAAGAAGAGCAAGCAACAACCACGCGGCTGTGTGAAGGGAGAAG
AAGCGAAGGAGCGAGACCAAGACCCGCGCGTGGCTGCCGTACTGGGTTTA
GTGCGACAGAACATTTTGGAGCTCGAGCCTTATCGATGTGCGCGGGACGA
TTACAGCGAGGGCATCCTGCTGGACGCGAACGAGAATTCGTTCGGCTCGG
CATTGCCTCCGGCAGAGCGAACACAGCAGCTGGAACGGTATCCGGACCCA
TACCAACAGGAGTTGAAGGAGAAGATTGGCGCCTACCGTGGCGTGCGGCC
GGAGCAGATTTTCGTGGGAGTAGGGAGCGACGAAGCAATCGATTTGATAA
TGCGGATTTTTTGCGAGCCCGGGAAGGACCGGATTCTGGTGACGCCTCCG
ACGTATGGCATGTATAAGGTGTCGGCCAAGACGAATGATGTGGGGATTGT
GGCTGTGCCTCTGACGCCTGACTTCTCGGTGCGAGTGTCAGAAATTCTGC
AGGCTGTTGCTTCTACTCCACGAATCAAGGTCATTTTCTTGTGTTCTCCT
GGGAACCCGACCGCGAAGCTCGTACCATTGGAGGTGGTAGAACAGGTTTT
GAAAGGCGTGGAGGGATGTATGGTAGTGGTGGATGAGGCGTATGTGGACT
TCGCGGATGCCAATGCCGTGAGTGCTTGTCGGTTGGTTGATCGATACCCA
AATTGCCTTGTGCTCCAGACGCTGTCTAAGGCGTTTGGTCTAGCAGGGAT
TAGGTGTGGGATGGCCATCGGCCATCCGGCCGTGATTCAGGTGTTGAACA
ACGTGAAGGCTCCGTATAATGTGAGTAAGTTGACGAGCAGCATGGCGCAT
AAGGCGTTTGAGAGTGGAAATTTGGCGGTGTTAAAGCAGAATGTCAAGGA
CATCCTGAAAGAGAAGGAACGGGTGGTGGAGGCTTTGGGGGGGCTGTCAG
TCGTGAAAAAAATTCACCCGTCGGATACGAATTTCATCCTGTTTGAGGTG
CCCCAGGCGAAAGATATTTACCAGGACATGGCGGAGGGCGGGGTGGTGGC
GCGGTTTCGCGGGCATGAGTTGCATTGCAAGGATTGTATTCGGTTGACCA
TTGGCCAGCCCCATGAGAACGATTCGTTTCTAGAGTTGTTCAAAAAGACT
ACGGAGAAGTATTTGGGGAAGTACACGTAG
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Coding sequence (CDS) from alignment at chr9:645469..646848+

>NO09G02100.1 ID=NO09G02100.1|Name=NO09G02100.1|organism=Nannochloropsis oceanica|type=CDS|length=1380bp|location=Sequence derived from alignment at chr9:645469..646848+ (Nannochloropsis oceanica)
ATGATTACCTTGACAGAGAGCGAGCTGGCCTTGCTGGCGGGGGTGAGCGG
CTTGGCAGTGTACGCGGCGAAGCAAACGCCCAAGTGCCCCTTCCACCGCC
TCGTCTTTGCCGTTTCCAACGTGGCTGTGCTTGGGGGAGGGCTCTACATC
TTGTGGCGCTCCTGGTCCGAGGCCCCACCGCGGTTTGTGCGCTTCTTGAC
AGCAGCGAAGAAGAGCAAGCAACAACCACGCGGCTGTGTGAAGGGAGAAG
AAGCGAAGGAGCGAGACCAAGACCCGCGCGTGGCTGCCGTACTGGGTTTA
GTGCGACAGAACATTTTGGAGCTCGAGCCTTATCGATGTGCGCGGGACGA
TTACAGCGAGGGCATCCTGCTGGACGCGAACGAGAATTCGTTCGGCTCGG
CATTGCCTCCGGCAGAGCGAACACAGCAGCTGGAACGGTATCCGGACCCA
TACCAACAGGAGTTGAAGGAGAAGATTGGCGCCTACCGTGGCGTGCGGCC
GGAGCAGATTTTCGTGGGAGTAGGGAGCGACGAAGCAATCGATTTGATAA
TGCGGATTTTTTGCGAGCCCGGGAAGGACCGGATTCTGGTGACGCCTCCG
ACGTATGGCATGTATAAGGTGTCGGCCAAGACGAATGATGTGGGGATTGT
GGCTGTGCCTCTGACGCCTGACTTCTCGGTGCGAGTGTCAGAAATTCTGC
AGGCTGTTGCTTCTACTCCACGAATCAAGGTCATTTTCTTGTGTTCTCCT
GGGAACCCGACCGCGAAGCTCGTACCATTGGAGGTGGTAGAACAGGTTTT
GAAAGGCGTGGAGGGATGTATGGTAGTGGTGGATGAGGCGTATGTGGACT
TCGCGGATGCCAATGCCGTGAGTGCTTGTCGGTTGGTTGATCGATACCCA
AATTGCCTTGTGCTCCAGACGCTGTCTAAGGCGTTTGGTCTAGCAGGGAT
TAGGTGTGGGATGGCCATCGGCCATCCGGCCGTGATTCAGGTGTTGAACA
ACGTGAAGGCTCCGTATAATGTGAGTAAGTTGACGAGCAGCATGGCGCAT
AAGGCGTTTGAGAGTGGAAATTTGGCGGTGTTAAAGCAGAATGTCAAGGA
CATCCTGAAAGAGAAGGAACGGGTGGTGGAGGCTTTGGGGGGGCTGTCAG
TCGTGAAAAAAATTCACCCGTCGGATACGAATTTCATCCTGTTTGAGGTG
CCCCAGGCGAAAGATATTTACCAGGACATGGCGGAGGGCGGGGTGGTGGC
GCGGTTTCGCGGGCATGAGTTGCATTGCAAGGATTGTATTCGGTTGACCA
TTGGCCAGCCCCATGAGAACGATTCGTTTCTAGAGTTGTTCAAAAAGACT
ACGGAGAAGTATTTGGGGAAGTACACGTAG
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Synonyms
Publications