NO09G00670.1, NO09G00670.1 (mRNA) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO09G00670.1 vs.
Match: EWM27717.1 (hypothetical protein Naga_100034g23 [Nannochloropsis gaditana]) HSP 1 Score: 360.9 bits (925), Expect = 5.200e-96 Identity = 195/377 (51.72%), Postives = 251/377 (66.58%), Query Frame = 0 Query: 1 MGDLEATIKGIGVSGTLVYVAMLLYITWRTCFLLFLQPPPATASRQQQLTLPAKKSFHVALFFSALLDLSYYAKLCTGAITSTSFSLHLMALWAELTAFSCVVVVWSRVLNAAKEKDSVLTYVIALDGFVLVWTLVVICLVIVAKDNVDQWVSPSSQPYIFFYLVQALALLSCCLALLYHGIRLQYIVRNHPRWEPLRRERRMRIVLRINAVLSVCTFCFLLRVVLLMAHFIQAEAHQQARFLDPAALVNWYVWCNWVPMCIPASILLFMMKNNPGRERGNI-GGATDGGGGLTLGLAAQAGGGQAGGGAETVGILREWEERLVSLNSSGNTSINRNYWRPNSASLYSPPSPSE--VDAVGPISPAA-ATPLTPATA 374 M DL ATI+GIG++GT ++ ML I+WR C FLQ A T AK FH+ LF +ALLDL YY L +++ +S HLMA WAEL AFS +V++W+R+LNA + KDSV+TYV+ALD F L++TL+VICL IV + N DQWV+ S+QP++FF+ VQA+AL +CCLALLYHGI LQY+VRNHPRW+P+RRERR+R VLRIN L CT CFLLRVVLL+A FIQAE+HQQARF DPA L+NWY+WCNWVP C+PA LL+ + N G+ R NI GG G + + + G LR+WEE L+S + + +N+ W N+ Y PP P+E + +SPAA PL A A Sbjct: 1 MEDLGATIQGIGITGTFLFAVMLAIISWRICVFYFLQDTQH-APLPTSTTFTAKLCFHIFLFMAALLDLCYYIPLSRELVSAGFYSAHLMAQWAELAAFSMIVILWARLLNAPRGKDSVVTYVVALDAFTLIYTLIVICLAIVVQQNGDQWVTSSNQPFVFFFFVQAVALFACCLALLYHGISLQYLVRNHPRWDPIRRERRLRTVLRINITLMACTVCFLLRVVLLLARFIQAESHQQARFSDPATLINWYIWCNWVPDCLPACFLLYTVGNGGGQARRNIDGGVPTSKNGSKMAMTSNTRAGALN------SYLRDWEEPLISPFETYKSVVNQKIWHSNAMDHYIPPHPAEPATEINERVSPAAEVVPLIEAAA 370 The following BLAST results are available for this feature:
BLAST of NO09G00670.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1) Total hits: 1
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G00670.1 ID=NO09G00670.1|Name=NO09G00670.1|organism=Nannochloropsis oceanica|type=mRNA|length=1239bpback to top protein sequence of NO09G00670.1 >NO09G00670.1-protein ID=NO09G00670.1-protein|Name=NO09G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=413bpback to top mRNA from alignment at chr9:245509..246747+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>NO09G00670.1 ID=NO09G00670.1|Name=NO09G00670.1|organism=Nannochloropsis oceanica|type=mRNA|length=1239bp|location=Sequence derived from alignment at chr9:245509..246747+ (Nannochloropsis oceanica)back to top Coding sequence (CDS) from alignment at chr9:245509..246747+ >NO09G00670.1 ID=NO09G00670.1|Name=NO09G00670.1|organism=Nannochloropsis oceanica|type=CDS|length=1239bp|location=Sequence derived from alignment at chr9:245509..246747+ (Nannochloropsis oceanica)back to top Synonyms
Publications
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